KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:32:35 2014 Check: 00 .. Name: ENSP00000471454/1-512 Len: 629 Check: 7917 Weight: 1.00 Name: ENSBTAP00000007652/1-518 Len: 629 Check: 3306 Weight: 1.00 Name: ENSTTRP00000001518/1-523 Len: 629 Check: 7876 Weight: 1.00 Name: bmy_06579T0/1-578 Len: 629 Check: 2439 Weight: 1.00 Name: BACU002130/1-444 Len: 629 Check: 2830 Weight: 1.00 // 1 50 ENSP00000471454/1-512 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000007652/1-518 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000001518/1-523 RRVPLPLRVG VACSAAGGYG SEKAGSWGGA GASAVEPLAR RVVRGEATLA bmy_06579T0/1-578 ---------- ---------- ---MGTWLRV SQYQSEARRP ---------- BACU002130/1-444 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000471454/1-512 MDQPAGLQ-- ---------- ---VDYVFRG VEHAVRVMVS GQVLELEVED ENSBTAP00000007652/1-518 MDQPAGLQ-- ---------- ---VDYVFRG VEHAVRVMVS GQVLELEVED ENSTTRP00000001518/1-523 MDQPAGLQ-- ---------- ---VDYVFRG VEHAVRVMVS GQVLELEVED bmy_06579T0/1-578 -DPGAGLELR QLNGSRGGVS VEKVDYVFRG VEHAVRVMVS GQVLELEVED BACU002130/1-444 MDQPAGLQ-- ---------- ---VDYVFRG VEHAVRVMVS GQVLELEVED 101 150 ENSP00000471454/1-512 RMTADQWRGE FDAGFIEDLT HKTGNFKQFN IFCHMLESAL TQSSESVTLD ENSBTAP00000007652/1-518 RMTADQWRGE FDANFIEDLT HKTGNFKQFS IFCNMLESAL TQSSESVTLD ENSTTRP00000001518/1-523 RMTADQWRAE FDASFIEDLT HKTGNFKQFN IFCNMLESAL TQSSESVTLD bmy_06579T0/1-578 RMTADQWRAE FDASFIEDLT HKTGNFKQFN IFCNMLESAL TQSSESVTLD BACU002130/1-444 RMTADQWRAE FDASFIEDLT HKTGNFKQFN IFCNMLESAL TQSSESVTLD 151 200 ENSP00000471454/1-512 LLTYTDLESL RNRKMGGRPG SLAPRSAQLN SKRYLILIYS VEFDRIH-YP ENSBTAP00000007652/1-518 LLTYTDLESL RNRKMGGRPG PLASRSAQLN SKRYLILIYS VEFDRNRWYP ENSTTRP00000001518/1-523 LLTYTDLESL RNRKMGGRPG PLASRSAQLN SKRYLILIYS VEFDRIH-YP bmy_06579T0/1-578 LLTYTDLESL RNRKMGGRPG PLASRSAQLN SKRYLILIYS ---------- BACU002130/1-444 LLTYTDLESL RNRKMGGRPG PLASRSAQLN SKRYLILIYS VEFDRIH-YP 201 250 ENSP00000471454/1-512 LPLPYQGKPD PVVLQGIIRS LKEELGRLQG LDGQNTRDTR ENEIWHLREQ ENSBTAP00000007652/1-518 RPLPYQGKPD PVVLQGIIRS LKEELSRLRG LDGQDTRDGR ETEIWHLREQ ENSTTRP00000001518/1-523 LPLPYQGKPD PVVLRGIIRS LKEELSRLRG LDGQDTRDSR ETEIWHLREQ bmy_06579T0/1-578 ------GKPD PVVLRGIIRS LKEELSRLRG LDGQDTRDSR ETEIWHLREQ BACU002130/1-444 LPLPYQGKPD PVVLRGIIRS LKEELSCLLG LDGQDTRDSR ETEIWHLREH 251 300 ENSP00000471454/1-512 VSRLASEKRE LEAQLGRSRE EALAGRAARQ EAEALRGLVR GLELELRQER ENSBTAP00000007652/1-518 VSRLVSEKRE LEAQLGRLRE EAVTGRAARQ EVESLRGLVR GLELELRQER ENSTTRP00000001518/1-523 VSRLSAEKRE LEAQLGRSRE EALAGRAARQ EVEALRGLVR GLELELRQER bmy_06579T0/1-578 VSRLAAEKRE LEAQLGRSRE EALAGRAARQ EVEALRGLVR GLELELRQER BACU002130/1-444 FGD------- -----GAVRE EAW------- ---------- ---------- 301 350 ENSP00000471454/1-512 GLGHRVAGRR GQDCRRLAKE LEEAKASERS LRARLKTLTS ELALYKRG-- ENSBTAP00000007652/1-518 GLGHRGSGRR SQDCRRLAKE LEEVKASERS LRARLKALNT ELALYKRG-- ENSTTRP00000001518/1-523 GLGHRGTGRR SQDCRRLAKE LEEVKASERS LRARLKTLNT ELAMYKRG-- bmy_06579T0/1-578 GLGHRGSGRR SQDCRRLAKE LEEVKASERS LRARLKTLNT ELAMYKRGFG BACU002130/1-444 ---------- DRSCRR---- ---------- -------WET DSGLCAPR-- 351 400 ENSP00000471454/1-512 ---------- ---------- ------RRTP PVQPPPTRED RASSSRERSA ENSBTAP00000007652/1-518 ---------- ---------- ------RRTP PVVPPSARED RASTSRERST ENSTTRP00000001518/1-523 ---------- ---------- ---------- ---------- ---------- bmy_06579T0/1-578 DGAVREEAWD RSCRRWETDS GLCAPRRRTT PVVPPSARED RASTSRERST BACU002130/1-444 ---------- ---------- ------RRTT PVVPPSARED RASTSRERST 401 450 ENSP00000471454/1-512 SRGRGAARSS SRESGRGSRG RGRPARPSPS PTGGRALRFD PTAFVKAKER ENSBTAP00000007652/1-518 SRGRGAARSS SRESGRGGRG RGRPARPSPS PTGGRVPRFD PTAFVKAKEK ENSTTRP00000001518/1-523 ---------- ----DRGGRG QGRPGRPSPS PTGGRVPRFD PTAFVKAKEK bmy_06579T0/1-578 SRGRGAARSS SRESDRGGRG QGRPARPSPS PTGGRVPRFD PTAFVKAKEK BACU002130/1-444 SRGRGAARSS SRESDRGGRG QGRPARPSPS PTGGRVPRFD PTAFVKAKEK 451 500 ENSP00000471454/1-512 KQREIQM--- ---------- --------KQ QQRNRLGSGG SGDGPSVSWS ENSBTAP00000007652/1-518 KQREIKMKLE HV-------- --------SS QQRNRLGSGG SGDGPSVSWS ENSTTRP00000001518/1-523 KQRAIKM--- ---------- --------KQ QQRNRLGSGG SGDRPSTSWS bmy_06579T0/1-578 KQRAIKMNDA LSRISWAHRW ASPFSFSRQQ QQRSRLGSGG SGDGPSVSWS BACU002130/1-444 KQRAIKMK-- ---------- --------QQ QQRSRLGSGG SGDGPSVSWS 501 550 ENSP00000471454/1-512 RQTQPPAALT GRGDAPNRSR NRSSSVDSFR SRCSSASSCS DLEDFSESLS ENSBTAP00000007652/1-518 RQTRPPAAVT GRGDAANRSR NRSSSVDSFR SRYSSASSCS ELEDFSESLP ENSTTRP00000001518/1-523 RQTRPPAAVT GRGDAANRSR NRSSSVDSFR SRYSSASSCS EFEDFSESLP bmy_06579T0/1-578 RQTRPPAAVT GRGDAANRSR NRSSSVDSFR SRYSSASSCS EFEDFSESLP BACU002130/1-444 RQTRPPAAVT GRGDAANRSR NRSSSVDSFR SRYSSASSCS EFEDFSESLP 551 600 ENSP00000471454/1-512 RGGHRRRGKP PSPTPWSGSN M--KSPPVER SHHQKSLANS GGWVPIKEYS ENSBTAP00000007652/1-518 R-GVRRRGKA PSPTTWSGFN T-QKSTPLER GRHQRRLASS GGWVPIKEYS ENSTTRP00000001518/1-523 R-GVRRRGKP PSPTTWRGSN T--KPSPLER GRHQRRLADS GGWVPIKEYS bmy_06579T0/1-578 R-GVRRRGKP PSPTTWSGSN TQQKPRPLER GRHQRRLADS GGWVPIKEYS BACU002130/1-444 R-GVRRRGKP PSPTTWSGSN TQQKPSPLER GRHQRRLADS GGWVPIKEYS 601 650 ENSP00000471454/1-512 SEHQAADMAE IDARLKALQE YMNRLDMRS ENSBTAP00000007652/1-518 SDHQAADMAE IDARLKALQE YMNRLDMRS ENSTTRP00000001518/1-523 SDHQAADMAE IDARLKALQE YMNRLDVHS bmy_06579T0/1-578 SDHQAADMAE IDARLKALQE YMNRLDTRS BACU002130/1-444 SDHQAADMAE IDARLKALQE YMNRLDMRS