KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:32:43 2014 Check: 00 .. Name: bmy_12333T0/1-226 Len: 332 Check: 811 Weight: 1.00 Name: ENSP00000356602/1-307 Len: 332 Check: 6876 Weight: 1.00 Name: ENSTTRP00000014219/1-305 Len: 332 Check: 3953 Weight: 1.00 Name: ENSBTAP00000007693/1-307 Len: 332 Check: 8438 Weight: 1.00 Name: BACU003652/1-309 Len: 332 Check: 1899 Weight: 1.00 // 1 50 bmy_12333T0/1-226 ---------- ---------- ---------- ---------- ---------- ENSP00000356602/1-307 ---MAALAPL PPLPAQFKSI QHHLRTAQEH DKRDPVVAYY CRLYAMQTGM ENSTTRP00000014219/1-305 ---MAALAPL PPLPAQFKSI QHHLRTAQEH DKRDPVVAYY CRLYAMQTGM ENSBTAP00000007693/1-307 ---MAALATL PPLPPQFKSI QHHLRTAQEH DKRDPVVAYY CRLYAMQTGM BACU003652/1-309 MAALASLPPL PPLPPQFKSI QHHLRTAQEH DKRDPVVAYY CRLYAMQTGM 51 100 bmy_12333T0/1-226 ---------- ------MDQF KALKKRLGGN KIVTQEIAGS VHLENYALKC ENSP00000356602/1-307 KIDSKTPECR KFLSKLMDQL EALKKQLGDN EAITQEIVGC AHLENYALKM ENSTTRP00000014219/1-305 KIDSKTPECR KFLSKLMDQL EALKKQLGDN EAVTQEIVGC AHLENYALKM ENSBTAP00000007693/1-307 KIDSKTPECR KFLSRLMDQL EALKKQLGDN EAITQEIVGS AHLENYALKM BACU003652/1-309 KIDSKTPECR KFLSKLMDQL EALKKQLGDN EAVTQEIVGS AHLENYALKM 101 150 bmy_12333T0/1-226 F--------- ------CVQT MKIAPVVFTR SSPSILQILK SCHDKNIQG- ENSP00000356602/1-307 FLYADNEDRA GRFHKNMIKS FYTASLLI-- ---DVITVFG ELTDENVKHR ENSTTRP00000014219/1-305 FLYAD-EDRG GRFHKNMIKS FYTASLLI-- ---DVITVFG ELTDENVKHR ENSBTAP00000007693/1-307 FLYADNEDRA GRFHKNMIKS FYTASLLI-- ---DVITVFG ELTDENVKHR BACU003652/1-309 FLYADNEDRA GRFHKNMIKS FYTASLLI-- ---DVITVFG ELTDENVKHR 151 200 bmy_12333T0/1-226 -----GVTYI HTFLKHRETP QGRPVRIGKI LMLKKIKKVE QPSTHLTHLN ENSP00000356602/1-307 KYARWKATYI HNCLKNGETP QAGPVGI--- ---------E EDN-DIEE-N ENSTTRP00000014219/1-305 KYARWKATYI HNCLKNGETP QAGPVGI--- ---------E EDN-DVEE-N ENSBTAP00000007693/1-307 KYARWKATYI HNCLKNGETP QAGPVGI--- ---------E EDNVDVEE-N BACU003652/1-309 KYARWKATYI HNCLKNGETP QAGPVGI--- ---------E EDN-DVEE-N 201 250 bmy_12333T0/1-226 QNHLHLQLRT QRALP-QAAV LERS------ ------PLRA HALADTAAAV ENSP00000356602/1-307 EDAGAASLPT QPTQPSSSST YDPSNMPSGN YTGIQIPPGA HAPANTPAEV ENSTTRP00000014219/1-305 EDAGTASLPS QPPQP-SSSA YDPSNMPSSS YAGIQIPPGA HAPANTPAEV ENSBTAP00000007693/1-307 EDAGATSLPT QPLQP-SSST YDPSNMPSSS YTGIQIPPGA HAPANTPAEV BACU003652/1-309 EDAGAASLPT QPPPP-SSST YDPSNMPSSS YTGIQIPPGA HAPANTPAEV 251 300 bmy_12333T0/1-226 PHSTG-ESGT VLPRPWVLLA IYPQFPRGGG CCSNTRGRGS SADALQA--- ENSP00000356602/1-307 PHSTGVASNT IQPTPQTIPA IDPALF---N TISQGDVRLT PEDFARAQKY ENSTTRP00000014219/1-305 PHSTGVASNT IQPTPQTIPA IDPALF---N TVSQGDIRLT PEDFARAQKY ENSBTAP00000007693/1-307 PHSTGVISNT IQPTPQTIPA IDPALF---S TVSQGDIRLT PEDFARAQKY BACU003652/1-309 PHSTGVTSNT IQPTPQTILA IDPALF---N TVSQGDIRLT PEDFARAQKY 301 350 bmy_12333T0/1-226 CWLAVHC--N VNVQPCCAEP SEALKLLSAG RG ENSP00000356602/1-307 CKYAGSALQY EDVSTAVQNL QKALKLLTTG RE ENSTTRP00000014219/1-305 CKYAGSALQY EDVSTAVQNL QKALKLLTTG RE ENSBTAP00000007693/1-307 CKYAGSALQY EDVSTAVQNL QKALKLLTTG RE BACU003652/1-309 CKYAGSALQY EDVSTAVQNL QKALKLLTTG RE