KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:32:45 2014 Check: 00 .. Name: ENSP00000233826/1-360 Len: 360 Check: 91 Weight: 1.00 Name: ENSBTAP00000007700/1-360 Len: 360 Check: 8951 Weight: 1.00 Name: ENSTTRP00000010378/1-280 Len: 360 Check: 861 Weight: 1.00 Name: BACU019778/1-277 Len: 360 Check: 8981 Weight: 1.00 Name: bmy_18158T0/1-335 Len: 360 Check: 8318 Weight: 1.00 // 1 50 ENSP00000233826/1-360 MDSSNCKVIA PLLSQRYRRM VTKDGHSTLQ MDGAQRGLAY LRDAWGILMD ENSBTAP00000007700/1-360 MDGSHCKVIA PLLTERHQRM VTKDGHSTLQ MDGAQTGLAY LRDAWGILMD ENSTTRP00000010378/1-280 ---------- ---------- ---------- ---------- ---------- BACU019778/1-277 ---------- ---------- ---------- ---------- ---------- bmy_18158T0/1-335 MDGSNCKVIA PLLTQRYRRM VTKDGHSTLQ MDGTQRGLAY LRDAWGILMD 51 100 ENSP00000233826/1-360 MRWRWMMLVF SASFVVHWLV FAVLWYVLAE MNGDLELDHD APPENHTICV ENSBTAP00000007700/1-360 MRWRWMMLVF SASFVIHWLV FAVLWYILAE MNGDLGLDHD APPENHTICV ENSTTRP00000010378/1-280 ---------- ---------- ---------- MNGDLELDHD APPESTTICV BACU019778/1-277 ---------- ---------- ---------- MNGDLELDHD APPENHTICV bmy_18158T0/1-335 MRWRWMMLVF SASFVIHWLV FAVLWYVLAE MNGDLELDHD APPENHTICV 101 150 ENSP00000233826/1-360 KYITSFTAAF SFSLETQLTI GYGTMFPSGD CPSAIALLAI QMLLGLMLEA ENSBTAP00000007700/1-360 KYITSFTAAF SFSLETQLTI GYGTMFPSGD CPSAIALLAI QMLLGLMLEA ENSTTRP00000010378/1-280 KYITSFTAAF SFSLETQLTF GYGTMFPSGD CPSAIALLAI QMLLGLMLEA BACU019778/1-277 KYITSFTAAF SFSLETQLTI GYGTMFPSGD CPSAIALLAI QMLLGLMLEA bmy_18158T0/1-335 KYITSFTAAF SFSLETQLTI GYGTMFPSGA ---------- ---------- 151 200 ENSP00000233826/1-360 FITGAFVAKI ARPKNRAFSI RFTDTAVVAH MDGKPNLIFQ VANTRPSPLT ENSBTAP00000007700/1-360 FITGAFVAKI ARPKNRAFSI RFTDLAVVAH IDGKPNLIFQ VANTRPSPLT ENSTTRP00000010378/1-280 FITGAFVAKI ARPKNRAFSI RFTDLAVVAH IDGKPNLIFQ VANTRPSPLT BACU019778/1-277 FITGAFVAKI ARPKNRAFSI RFTDLAVVAH IDGKPNLIFQ VANTRPSPLT bmy_18158T0/1-335 -----FVAKI ARPKNRAFSI RFTDLAVVAH IDGKPNLIFQ VANTRPSPLT 201 250 ENSP00000233826/1-360 SVRVSAVLYQ ERENGKLYQT SVDFHLDGIS SDECPFFIFP LTYYHSITPS ENSBTAP00000007700/1-360 NVRVSAVLYQ ERENGKLYQT SVDFHLDGIS SEECPFFIFP LTYYHSIIPS ENSTTRP00000010378/1-280 SVRVSAILYQ ERENGELYQT SVDFHLDGIS SEECPFFIFP LTYYHSIIPS BACU019778/1-277 SVRVSAVLYQ ERENGELYQT SVDFHLDGIS SEECPFFIFP LTYYHSIIPS bmy_18158T0/1-335 SVRVSAVLYQ ERENGELYQT SVDFHLDGIS SEECPFFIFP LTYYHSIIPS 251 300 ENSP00000233826/1-360 SPLATLLQHE NPSHFELVVF LSAMQEGTGE ICQRRTSYLP SEIMLHHCFA ENSBTAP00000007700/1-360 SPLATLLQHE NPPHFELVVF LSAMQEGTGE TCQRRTSYLP SEIMLHHCFA ENSTTRP00000010378/1-280 SPLATLLQHE NPPHFELVVF LSAMQEGTGE ICQRRTSYLP SEIMLHHCFA BACU019778/1-277 SPLATLLQHE NPPHFELVVF LSAMQEGTGE ICQRRTSYLP SEIMLHHCFA bmy_18158T0/1-335 SPLATLLQHE NPPHFELVVF LSAMQEGTGE ICQRRTSYLP SEIMLHHCFA 301 350 ENSP00000233826/1-360 SLLTRGSKGE YQIKMENFDK TVPEFPTPLV SKSPNRTDLD IHINGQSIDN ENSBTAP00000007700/1-360 SLLARGSKGE YQIKMENFDK TTPEFQTPLV SKSPNRTDLD IHINGQSIDN ENSTTRP00000010378/1-280 SLLTRGSKGE YQIKMENFDK TIPELPTPLV SKSPNRTDLD IHINGQSIDN BACU019778/1-277 SLLTRGSKGE YQIKMENFDK TIPELPTPLV SKSPNRTDLD IHINGQSIDN bmy_18158T0/1-335 SLLTRGSKGE YQIKMENFDK TIPELPTPLV SKSPNRTDLD IHINGQSIDN 351 400 ENSP00000233826/1-360 FQISETGLTE ENSBTAP00000007700/1-360 FQISETGLTE ENSTTRP00000010378/1-280 FQISETGLTE BACU019778/1-277 FQISETG--- bmy_18158T0/1-335 FQISETGLKE