KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:32:47 2014 Check: 00 .. Name: ENSBTAP00000007705/1-1288 Len: 1364 Check: 5459 Weight: 1.00 Name: ENSP00000349961/1-1288 Len: 1364 Check: 8565 Weight: 1.00 Name: ENSTTRP00000000069/1-1278 Len: 1364 Check: 5634 Weight: 1.00 Name: bmy_07623T0/1-1287 Len: 1364 Check: 369 Weight: 1.00 Name: BACU012266/1-1363 Len: 1364 Check: 8710 Weight: 1.00 // 1 50 ENSBTAP00000007705/1-1288 MPRKGTQPST AHRREEG-PP RSPDGTSSDA EPDPPPGRAR SQALATAETP ENSP00000349961/1-1288 MPRKGTQPST ARRREEGPPP PSPDGASSDA EPEPPSGRTE SPATA-AETA ENSTTRP00000000069/1-1278 MPRKGTQPST ARRREEG-PP QSPDGASSDA EPEPPPGRAG SLAPATAETP bmy_07623T0/1-1287 MPRKGTQPST ARRREEG-PP QSPDGASSDA EPEPPPGRAG SLAPATAETP BACU012266/1-1363 MPRKDTQPST ARRREEG-PP QSPDGASSDA EPEPPPGRAG SLAPATAETP 51 100 ENSBTAP00000007705/1-1288 SEEIDNRSLE EILNSIPPPP PPAMTNEPGA PRLMITHIVN QNFKSYAGEK ENSP00000349961/1-1288 SEELDNRSLE EILNSIPPPP PPAMTNEAGA PRLMITHIVN QNFKSYAGEK ENSTTRP00000000069/1-1278 SEEIDNRSLE EILNSIPPPP PPAMTNEAGA PRLMITHIVN QNFKSYAGEK bmy_07623T0/1-1287 SEEIDNRSLE EILNSIPPPP PPAMTNEAGA PRLMITHIVN QNFKSYAGEK BACU012266/1-1363 SEEIDNRSLE EILNSIPPPP PPAMTNEAGA PRLMITHIVN QNFKSYAGEK 101 150 ENSBTAP00000007705/1-1288 ILGPFHKRFS CIIGPNGSGK SNVIDSMLFV FGYRAQKIRS KKLSVLIHNS ENSP00000349961/1-1288 ILGPFHKRFS CIIGPNGSGK SNVIDSMLFV FGYRAQKIRS KKLSVLIHNS ENSTTRP00000000069/1-1278 ILGPFHKRFS CIIGPNGSGK SNVIDSMLFV FGYRAQKIRS KKLSVLIHNS bmy_07623T0/1-1287 ILGPFHKRFS CIIGPNGSGK SNVIDSMLFV FGYRAQKIRS KKLSVLIHNS BACU012266/1-1363 ILGPFHKRFS CIIGPNGSGK SNVIDSMLFV FGYRAQKIRS KKLSVLIHNS 151 200 ENSBTAP00000007705/1-1288 DEHKDIQSCT VAVHFQKIID KEGDDYEVIP NSNFYVSRTA YRDNTSVYHV ENSP00000349961/1-1288 DEHKDIQSCT VEVHFQKIID KEGDDYEVIP NSNFYVSRTA CRDNTSVYHI ENSTTRP00000000069/1-1278 DEHKDIQSCT VEVHFQKIID KEGDDYEVVP NSNFYVSRTA YRDNTSVYHI bmy_07623T0/1-1287 DEHKDIQSCT VEVHFQKIID KEGDDYEVVP NSNFYVSRTA YRDNTSVYHI BACU012266/1-1363 DEHKDIQSCT VEVHFQKIID KEGDDYEVVP NSNFYVSRTA YRDNTSVYHI 201 250 ENSBTAP00000007705/1-1288 SGKKTTFKDV GILLRSHGID LDHNRFLILQ GEVEQIAMMK PKGQTEHDEG ENSP00000349961/1-1288 SGKKKTFKDV GNLLRSHGID LDHNRFLILQ GEVEQIAMMK PKGQTEHDEG ENSTTRP00000000069/1-1278 SGKKKTFKDV GNLFRSHGID LDHNRFLILQ GEVEQIAMMK PKGQTEHDEG bmy_07623T0/1-1287 SGKKKTFKDV GNLLRSHGID LDHNRFLILQ GEVEQIAMMK PKGQTEHDEG BACU012266/1-1363 SGKKKTFKDV GNLLRSHGID LDHNRFLILQ GEVEQIAMMK PKGQTEHDEG 251 300 ENSBTAP00000007705/1-1288 MLEYLEDIIG SGRLNEPIKV LCRRVEILNE HRGEKLNRVK MVEKEKDALE ENSP00000349961/1-1288 MLEYLEDIIG CGRLNEPIKV LCRRVEILNE HRGEKLNRVK MVEKEKDALE ENSTTRP00000000069/1-1278 MLEYLEDIIG CGRLNEPIKV LCRRFEILNE HRGEKLNRVK MVEKEKDALE bmy_07623T0/1-1287 MLEYLEDIIG CGRLNEPIKV LCRRFEILNE HRGEKLNRVK MVEKEKDALE BACU012266/1-1363 MLEYLEDIIG CGRLNEPIKV LCRRFEILNE HRGEKLNRVK MVEKEKDALE 301 350 ENSBTAP00000007705/1-1288 GEKNIAIEFL TLENEIFRKK NHVCQYYIYD LQKRIAEMET QKEKINEDTK ENSP00000349961/1-1288 GEKNIAIEFL TLENEIFRKK NHVCQYYIYE LQKRIAEMET QKEKIHEDTK ENSTTRP00000000069/1-1278 GEKNIAIEFL TLENEIFRKK NHVCQYYIYD LQKRIAEMET QKEKIHEDTK bmy_07623T0/1-1287 GEKNIAIEFL TLENEIFRKK NHVCQYYIYD LQKRIAEMET QKEKIHEDTK BACU012266/1-1363 GEKNIAIEFL TLENEIFRKK NHVCQYYIYD LQKRIAEMET QKEKIHEDTK 351 400 ENSBTAP00000007705/1-1288 EINEKSNILS NEMKAKNKAV KDVEKKLNKI TKFIEENKEK FTKLDLEDVQ ENSP00000349961/1-1288 EINEKSNILS NEMKAKNKDV KDTEKKLNKI TKFIEENKEK FTQLDLEDVQ ENSTTRP00000000069/1-1278 EINEKSNILS NEMKAKNKDV KDIEKKLNKI TKFIEENKEK FTKLDLEDVQ bmy_07623T0/1-1287 EINEKSNILS NEMKAKNKDV KDVEKKLNKI TKFIEENKEK FTKLDLEDVQ BACU012266/1-1363 EINEKSNILS NEMKAKNKDV KDVEKKLNKI TKFIEENKEK FTKLDLEDVQ 401 450 ENSBTAP00000007705/1-1288 VREKLKHATS KAKKLEKQLQ KDKEKVEEFK SIPTKSENII RETTTKNNAL ENSP00000349961/1-1288 VREKLKHATS KAKKLEKQLQ KDKEKVEEFK SIPAKSNNII NETTTRNNAL ENSTTRP00000000069/1-1278 VREKLKHATS KARKLEKQLQ KDKEKVEEFK SIPAKSENII TETTTRNNAL bmy_07623T0/1-1287 VREKLKHATS KARKLEKQLQ KDKEKVEEFK SIPAKSENII TETTTRNNAL BACU012266/1-1363 VREKLKHATS KARKLEKQLQ KDKEKVEEFK SIPAKSENII TETTTRNNAL 451 500 ENSBTAP00000007705/1-1288 EKEKEKEEEK LKEVMDSLKQ ETQDLQKEKE SREKELMDFS KSVNEARSKM ENSP00000349961/1-1288 EKEKEKEEKK LKEVMDSLKQ ETQGLQKEKE SREKELMGFS KSVNEARSKM ENSTTRP00000000069/1-1278 EKEKEKEEKK LKEVMDSLKQ ETQGLQKEKE SREKELMDFS KSVNEARSKM bmy_07623T0/1-1287 EKEKEKEEEK LKKVMDSLKQ ETQGLQKEKE SREKELMDFS KSVNEARSKM BACU012266/1-1363 EKEKEKEEEK LKKVMDSLKQ ETQGLQKEKE SREKELMDFS KSVNEARSKM 501 550 ENSBTAP00000007705/1-1288 DVAQSELDIY LRRHNTAVSQ LGKAKEALMA ASETLKERKA AIGDIEAKLP ENSP00000349961/1-1288 DVAQSELDIY LSRHNTAVSQ LTKAKEALIA ASETLKERKA AIRDIEGKLP ENSTTRP00000000069/1-1278 DVAQSELDIY LSRHNTAVSQ LSKANEALMA ASETLKERKA AIGDIQAKLP bmy_07623T0/1-1287 DVAQSELDIY LSRHNTAVSQ LSKANEALMA ASETLKERKA AIGDIEAKLP BACU012266/1-1363 DVAQSELDIY LSRHNTAVSQ LSKANEALMA ASETLKERKA AIGDIEAKLP 551 600 ENSBTAP00000007705/1-1288 QTEHELKE-- ---------- ---------- ---------- ---------- ENSP00000349961/1-1288 QTEQELKE-- ---------- ---------- ---------- ---------- ENSTTRP00000000069/1-1278 QIEHELKE-- ---------- ---------- ---------- ---------- bmy_07623T0/1-1287 QTEHELKE-- ---------- ---------- ---------- ---------- BACU012266/1-1363 QTERELKECN LSQKSGVNSS VFYLIRIETI KKLRSPFKCQ TANNIAAATI 601 650 ENSBTAP00000007705/1-1288 ---------- ---------- ---------- ---KEKELQK LTQEEINFKS ENSP00000349961/1-1288 ---------- ---------- ---------- ---KEKELQK LTQEETNFKS ENSTTRP00000000069/1-1278 ---------- ---------- ---------- ---KEKQLQK LTQEEINFKS bmy_07623T0/1-1287 ---------- ---------- ---------- ---KEKQLQK LTQEEINFKS BACU012266/1-1363 ISRGKNLNKR KFFVSLNLSV DNFGNGKGKS QISKEKQLQK LTQEEINFRS 651 700 ENSBTAP00000007705/1-1288 LVRDLFQKVE EAKSSLAMNR SRGKVLDAII QEKKSGRIPG IYGRLGDLGT ENSP00000349961/1-1288 LVHDLFQKVE EAKSSLAMNR SRGKVLDAII QEKKSGRIPG IYGRLGDLGA ENSTTRP00000000069/1-1278 LVRDLFQKVE EAKSSLAMNR SRGKVLDAII QEKKSGRIPG IYGRLGDLGA bmy_07623T0/1-1287 LVRDLFQKVE EAKSSLAMXR SRGKVLDAII QEKKSGRIPG IYGRLGDLGA BACU012266/1-1363 LICDLFQKVE EAKSSLAMNR SRGKVLDAII QEKKSGRIPG IYGRLGDLGA 701 750 ENSBTAP00000007705/1-1288 IDEKYDVAIS SCCHALDYIV VDSIDTAQEC VNFLKRQNIG VATFIGLDKM ENSP00000349961/1-1288 IDEKYDVAIS SCCHALDYIV VDSIDIAQEC VNFLKRQNIG VATFIGLDKM ENSTTRP00000000069/1-1278 IDEKYDIAIS SCCHALDYIV VDSIDTAQEC VNFLKRQNIG ---------M bmy_07623T0/1-1287 IDEKYDIAIS SCCHALDYIV VDSIDTAQEC VNFLKXQNIG VATFIGLDKM BACU012266/1-1363 IDEKYDIAIS SCCHALDYIV VDSIDTAQEC VNFLKRQNIG VATFIGLDKM 751 800 ENSBTAP00000007705/1-1288 AVWAKKMTKI QTPENTPRLF DLVKVKDGAI RQAFYFALRD TLVADSLDQA ENSP00000349961/1-1288 AVWAKKMTEI QTPENTPRLF DLVKVKDEKI RQAFYFALRD TLVADNLDQA ENSTTRP00000000069/1-1278 AVWAKKMTKI QTPENTPRLF DLVKVKDEEI RQAFYFALRD TLVADNLDQA bmy_07623T0/1-1287 AVWTKKMTKI QTPENTPRLF DLVNVKDEEI RQAFYFALRD TLVADNLDQA BACU012266/1-1363 AVWTKKMTKI QTPENTPRLF DLVNVKDEEI RQAFYFALRD TLVADNLDQA 801 850 ENSBTAP00000007705/1-1288 TRVAYQKDRR WRVVTLQGQI IEQSGTMTGG GSKVMKGRMG SSVVVEISEE ENSP00000349961/1-1288 TRVAYQKDRR WRVVTLQGQI IEQSGTMTGG GSKVMKGRMG SSLVIEISEE ENSTTRP00000000069/1-1278 TRVAYQKDRR WRVVTLQGQI IEQSGTMTGG GSKVMKGRMG SS-VVVIPEE bmy_07623T0/1-1287 TRVAYQKDRR WRVVTLQGQI IEQSGTMTGG GSKVMKGRMG SS-VVEISEE BACU012266/1-1363 TRVAYQKDRR WRVVTLQGQI IEQSGTMTGG GSKVMKGRMG SSVVVEISEE 851 900 ENSBTAP00000007705/1-1288 EVNKMESQLQ RDSQKAVQIQ EQKVQLEEAI LRLRHSEREM RNTLEKFSAS ENSP00000349961/1-1288 EVNKMESQLQ NDSKKAMQIQ EQKVQLEERV VKLRHSEREM RNTLEKFTAS ENSTTRP00000000069/1-1278 EVNKMESQLQ RDSQKAVQIQ EQKVQLEEAV VKLRHSEREM RNTLEKFTAS bmy_07623T0/1-1287 EVNKMESQLQ RDSQKAVQIQ EQKVQLEEAV VKLRHSEREM RNTLEKFTAS BACU012266/1-1363 EVNKMESQLQ RDSQKAVQIQ EQKVQLEEAV VKLRHSEREM RNTLEKFTAS 901 950 ENSBTAP00000007705/1-1288 IQRLSEQEEY LNVQVKELEA NVLATVPDKK QQKVLEENVN TFKTEYNSVA ENSP00000349961/1-1288 IQRLIEQEEY LNVQVKELEA NVLATAPDKK KQKLLEENVS AFKTEYDAVA ENSTTRP00000000069/1-1278 IQRLSEQEEY LNVQVKELEA NVLATAPDQK KQKLLEENVT AFKTEYNNVA bmy_07623T0/1-1287 IQRLSEQEEY LNVQVKELEA NVLATAPDQK KQKLLEENVT AFKTEYNNVA BACU012266/1-1363 IQRLSEQEEY LNVQVKELEA NVLATAPDQK KQKLLEENVT AFKTEYNNVA 951 1000 ENSBTAP00000007705/1-1288 ERAGKVEAEV KRLHNIIVEI NNHKLKAQQD KLDKINKQLD ECASAITKAQ ENSP00000349961/1-1288 EKAGKVEAEV KRLHNTIVEI NNHKLKAQQD KLDKINKQLD ECASAITKAQ ENSTTRP00000000069/1-1278 ERAGKVEAEV KRLHNIIVEI NNHKLKAQQD KLDKINKQLD ECASAITKAQ bmy_07623T0/1-1287 ERAGKVEAEV KRLHNIIVEI NNHKLKAQQD KLDKINKQLD ECASAITKAQ BACU012266/1-1363 ERAGKVEAEV KRLHNIIVEI NNHKLKAQQD KLDKINKQLD ECASAITKAQ 1001 1050 ENSBTAP00000007705/1-1288 VAIKTADRNL KKAQDNVLRT EKEIKDTEKE VDDLTTELKS LEDKAAEVVK ENSP00000349961/1-1288 VAIKTADRNL QKAQDSVLRT EKEIKDTEKE VDDLTAELKS LEDKAAEVVK ENSTTRP00000000069/1-1278 VAIKTADRNL KXXXXXXXXX XXXXXXXXXX XXXXXXELKS LEDKAAEVVK bmy_07623T0/1-1287 VAIKTADRNL KKAQDSVFRT EKEIKDTEKE VDDLTAELKS LEDKATEVVK BACU012266/1-1363 VAIKTADRNL KKAQDSVFRT EKEIKDTEKE VDDLTAELKS LEDKATEVVK 1051 1100 ENSBTAP00000007705/1-1288 NTNDAEASLP EIQKEHRNLL QELKVIQENE HALQKDALSI KLKLEQIDGH ENSP00000349961/1-1288 NTNAAEESLP EIQKEHRNLL QELKVIQENE HALQKDALSI KLKLEQIDGH ENSTTRP00000000069/1-1278 NANAAEESLP EIQKEHRNLL KELKVIQENE HALQKDALSI KLKLEQVDGH bmy_07623T0/1-1287 NTNAAEESLP DIQKEHRNLL QELKVIQENE HALQKDALSI KLKLEQVDGH BACU012266/1-1363 NTNAAEESLP DIQKEHRNLL QELKVIQENE HALQKDALSI KLKLEQVDGH 1101 1150 ENSBTAP00000007705/1-1288 IGEHNSKIKY WQREISKISL HPIEDNHVEK IPVLSPEELE AIKNPDSITN ENSP00000349961/1-1288 IAEHNSKIKY WHKEISKISL HPIEDNPIEE ISVLSPEDLE AIKNPDSITN ENSTTRP00000000069/1-1278 IGEHNSKIKY WQKEISKISL HPIEDNPVEE IPLLSPEDLE AIKNPDSITN bmy_07623T0/1-1287 IGEHNSKIKY WQKEISKISL HPIEDNPVEE IPLLSPTNLE AIKNPDSITN BACU012266/1-1363 IGEHNSKIKY WQKEISKISL HPIEDNPVEE IPLLSPENLE AIKNPDSITN 1151 1200 ENSBTAP00000007705/1-1288 QIAVLEAQCH EMKPNLGAIA DYKKKEELYL QRVAELDKIT NERDNFRQAY ENSP00000349961/1-1288 QIALLEARCH EMKPNLGAIA EYKKKEELYL QRVAELDKIT YERDSFRQAY ENSTTRP00000000069/1-1278 QIALLEAQCH EMKPNLGAIA EYKKKEELYL QRVAELDKIT YERDNFRQAY bmy_07623T0/1-1287 QIALLEAQCH EMKPNLGAIA EYKKKEELYL QRVAELDKIT YERDNFRQAY BACU012266/1-1363 QIALLEAQCH EMKPNLGAIA EYKKKEELYL QRVAELDKIT YERDNFRQAY 1201 1250 ENSBTAP00000007705/1-1288 EDLRKQRLNE FMAGFYIITN KLKENYQMLT LGGDAELDLV DSMDPFSEGI ENSP00000349961/1-1288 EDLRKQRLNE FMAGFYIITN KLKENYQMLT LGGDAELELV DSLDPFSEGI ENSTTRP00000000069/1-1278 EDLRKQRLNE FMAGFYIITN KLKENYQMLT LGGDAELELV DSLDPFSEGI bmy_07623T0/1-1287 EDLRKQRLSE FMAGFYIITN KLKENYQMLT LGGDAELELV DSLDPFSEGI BACU012266/1-1363 EDLRKQRLNE FMAGFYIITN KLKENYQMLT LGGDAELELV DSLDPFSEGI 1251 1300 ENSBTAP00000007705/1-1288 TFSVRPPKKS WKKIFNLSGG EKTLSSLALV FALHHYKPTP LYFMDEIDAA ENSP00000349961/1-1288 MFSVRPPKKS WKKIFNLSGG EKTLSSLALV FALHHYKPTP LYFMDEIDAA ENSTTRP00000000069/1-1278 MFSVRPPKKS WKKIFNLSGG EKTLSSLALV FALHHYKPTP LYFMDEIDAA bmy_07623T0/1-1287 MFSVRPPKKS WKKIFNLSGG EKTLSSLALV FALHHYKPTP LYFMDEIDAA BACU012266/1-1363 MFSVRPPKKS WKKIFNLSGG EKTLSSLALV FALHHYKPTP LYFMDEIDAA 1301 1350 ENSBTAP00000007705/1-1288 LDFKNVSIVA FYIYEQTKNA QFIIISLRNN MFEISDRLIG IYKTYNITKS ENSP00000349961/1-1288 LDFKNVSIVA FYIYEQTKNA QFIIISLRNN MFEISDRLIG IYKTYNITKS ENSTTRP00000000069/1-1278 LDFKNVSIVA FYIYEQTKNA QFIIISLRNN MFEISDRLIG IYKTYNITKS bmy_07623T0/1-1287 LDFKNVSIVA FYIYEQTKNA QFIIISLRNN MFEISDRLIG IYKTYNITKS BACU012266/1-1363 LDFKNVSIVA FYIYEQTKNA QFIIISLRNN MFEISDRLIG IYKTYNITKS 1351 1400 ENSBTAP00000007705/1-1288 VAVNPKEIAS KGLC ENSP00000349961/1-1288 VAVNPKEIAS KGLC ENSTTRP00000000069/1-1278 VAVNPKEIAS KGLC bmy_07623T0/1-1287 VAVNPKEIAS KGLC BACU012266/1-1363 VAVNPKEIAS KGLC