KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:32:51 2014 Check: 00 .. Name: ENSP00000308082/1-313 Len: 321 Check: 288 Weight: 1.00 Name: ENSBTAP00000007734/1-312 Len: 321 Check: 8684 Weight: 1.00 Name: bmy_03957T0/1-179 Len: 321 Check: 5972 Weight: 1.00 Name: BACU008110/1-171 Len: 321 Check: 4356 Weight: 1.00 // 1 50 ENSP00000308082/1-313 MAGENHTTLP EFLLLGFSDL KALQGPLFWV VLLVYLVTLL GNSLIILLTQ ENSBTAP00000007734/1-312 -MAKENQTLP EFLLLGFSDL RALQGPLFWG VLLVYLVTLL GNSLIILLTQ bmy_03957T0/1-179 ---------- ---------- ---------- ---------- ---------- BACU008110/1-171 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000308082/1-313 VSPALHSPMY FFLRQLSVVE LFYTTDIVPR TLANLGSPHP QAISFQGCAA ENSBTAP00000007734/1-312 ASPTLHAPMY FFLRHLSLVE LLYTTDIVPR TLADLAFPHP RAISFWGCAA bmy_03957T0/1-179 ---------- ---------- ---------- ---------- ---------- BACU008110/1-171 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000308082/1-313 QMYVFIVLGI SECCLLTAMA YDRYVAICQP LRYSTLLSPR ACMAMVGTSW ENSBTAP00000007734/1-312 QMYVFIVLGI SECCLLTAMA YDRYAAICQP LHYSTLMSWR ACMAMVGISW bmy_03957T0/1-179 ---------- ---------- ---------- ---------- --MAMVDISW BACU008110/1-171 ---------- ---------- ---------- ---------- --MAMMGISW 151 200 ENSP00000308082/1-313 LTGIITATTH ASLIFSLPFR SHPIIPHFLC DILPVLRLAS AGKHRSEISV ENSBTAP00000007734/1-312 LMGIITATTH SSLIFTLPFP SRPVIPHFLC DILPVLRLAS AGKHRSEVSV bmy_03957T0/1-179 LMGIITATTH SFLIFTLPFP SCPIIPHFLC DILPVLRLAS AGKHRSVISV BACU008110/1-171 LMGIITATTH SFLIFTLPFP SRPIIPHFLC DILPVLRLAS AGKHRSVISV 201 250 ENSP00000308082/1-313 MTATIVFIMI PFSLIVTSYI RILGAILAMA STQSRRKVFS TCSSHLLVVS ENSBTAP00000007734/1-312 MMATVVFIMV PFSLIVTSYA HILSAILAMA STLSRRKVFS TCSSHLLVVF bmy_03957T0/1-179 MTATVVFIVV PFSLIVTSYT RILGAILAMA STQSRCKVFS TCSSHLLVVF BACU008110/1-171 MTATVVFIVV PFSLIVTSYA RILGAILAMA STQSRCKVFS TCSSHLLVVF 251 300 ENSP00000308082/1-313 LFFGTASITY IRPQAGSSVT TDRVLSLFYT VITPMLNPII YTLRNKDVRR ENSBTAP00000007734/1-312 LFFGTASITY IRPRAGSSVT MNRILSLFYT VITPMLNPII YTLRNKEVTR bmy_03957T0/1-179 PFFGTASITY IWPRAGSSVT TDRILSLFYT VITPMLNPII YTLRNKEVTR BACU008110/1-171 PFFGTASITY IWPQAGSSVT TDRVLSLFYT VITPMLNPII YTLRNKEVTR 301 350 ENSP00000308082/1-313 ALRH------ --LVKRQRPS P ENSBTAP00000007734/1-312 ALWH------ --VVKRQVPS P bmy_03957T0/1-179 ALQHMVKRLM GLMVKRHVPS P BACU008110/1-171 ALQH------ --MVKRQVPS P