KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:32:52 2014 Check: 00 .. Name: ENSP00000264972/1-619 Len: 642 Check: 9038 Weight: 1.00 Name: ENSBTAP00000007743/1-617 Len: 642 Check: 3615 Weight: 1.00 Name: ENSTTRP00000014799/1-613 Len: 642 Check: 8114 Weight: 1.00 Name: bmy_06875T0/1-314 Len: 642 Check: 5321 Weight: 1.00 Name: BACU017704/1-639 Len: 642 Check: 3604 Weight: 1.00 // 1 50 ENSP00000264972/1-619 MPDPAAHLPF FYGSISRAEA EEHLKLAGMA DGLFLLRQCL RSLGGYVLSL ENSBTAP00000007743/1-617 MPDPAAHLPF FYGSISRAEA EEHLKLAGMA DGLFLLRQCL RSLGGYVLSL ENSTTRP00000014799/1-613 MPDPAAHLPF FYGSISRAEA EEHLKLAGMA DGLFLLRHCL RSLGGYVLSL bmy_06875T0/1-314 ---------- ---------- ---------- ---------- ---------- BACU017704/1-639 MPDPAAHLPF FYGSISRAEA EEHLKLAGMA DGLFLLRQCL RSLGGYVLSL 51 100 ENSP00000264972/1-619 VHDVRFHHFP IERQLNGTYA IAGGKAHCGP AELCEFYSRD PDGLPCNLRK ENSBTAP00000007743/1-617 VHEVRFHHFP IERQLNGTYA IAGGKAHCGP AELCEFYSRD PDGLPCNLRK ENSTTRP00000014799/1-613 VHDVRFHHFP IERQLNGTYA IAGGKAHCGP AELCEFYSRD PDGLPCNLRK bmy_06875T0/1-314 ---------- ---------- ---------- ---------- ---------- BACU017704/1-639 VHDVRFHHFP IERQLNGTYA IAGGKAHCGP AELCEFYSRD PDGLPCNLRK 101 150 ENSP00000264972/1-619 PCNRPSGLEP QPGVFDCLRD AMVRDYVRQT WKLEGEALEQ AIISQAPQVE ENSBTAP00000007743/1-617 PCNRPSGLEP QPGVFDNLRD AMVRDYVRQT WKLEGEALEQ AIISQAPQVE ENSTTRP00000014799/1-613 PCNRPSGLEP QPGVFDSLRD AMVRDYVRQT WKLEGEALEQ AIISQAPQVE bmy_06875T0/1-314 ---------- ---------- ---------- ---------- ---------- BACU017704/1-639 PCNRPSGFEP QPGVFDSLRD AMVRDYVRQT WKLEGEALEQ AIISQAPQVE 151 200 ENSP00000264972/1-619 KLIATTAHER MPWYHSSLTR EEAERKLYSG AQTDGKFL-- ---------- ENSBTAP00000007743/1-617 KLIATTAHER MPWYHSSLTR EEAERKLYSG SQTDGKFL-- ---------- ENSTTRP00000014799/1-613 KLIATTAHER MPWYHKSLTR EEAERKLYSG SQTDGKFL-- ---------- bmy_06875T0/1-314 ---------- ---------- ---------- ---------- ---------- BACU017704/1-639 KLIATTAHER MPWYHSSLTR EEAERKLYSG SQTDGKFLYV GLGAWGFGAV 201 250 ENSP00000264972/1-619 ---------L RPRKEQGTYA LSLIYGKTVY HYLISQDKAG KYCIPEGTKF ENSBTAP00000007743/1-617 ---------L RPRKEPGTYA LSLIYGKTVY HYLISQDKAG KYCIPEGTKF ENSTTRP00000014799/1-613 ---------L RPRKEQ-TYA LSLIYGKTVY HYLISQDKAG KYCIPEGTKF bmy_06875T0/1-314 ---------- ---------- ---------- ---------- ---------- BACU017704/1-639 RLGQTSVCRL RPRKEQGTYA LSLIYGKTVY HYLISQDKAG KYCIPEGTKF 251 300 ENSP00000264972/1-619 DTLWQLVEYL KLKADGLIYC LKEACPNSSA SNASGAAAPT LPAHPSTLTH ENSBTAP00000007743/1-617 DTLWQLVEYL KLKADGLIYC LKEACPNSSA S--SGAAAPT LPAHPSTFTQ ENSTTRP00000014799/1-613 DTLWXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_06875T0/1-314 ---------- ---------- ---------- ---------- ---------- BACU017704/1-639 DTLWQLVEYL KLKADGLIYC LKEACPNSAS ---SEATAPT LPAHPSTFTQ 301 350 ENSP00000264972/1-619 PQRRIDTLNS DGYTPEPARI TSPDKPRPMP MDTSVYESPY SDPEELKDKK ENSBTAP00000007743/1-617 PQRRIDTLNS DGYTPEPARL VSSEKPRTMP MDTSVYESPY SDPEELKNKK ENSTTRP00000014799/1-613 XXXXXXXXXX XXXXXXXXCL ASSEKPRSMP MDTSVYESPY SDPEELKNKK bmy_06875T0/1-314 ---------- ---------- --------MP MDTSVYESPY SDPEELKNKK BACU017704/1-639 PQRRIDTLNS DGYTPEPACL ASSEKPRSMP MDTSVYESPY SDPEELKNKK 351 400 ENSP00000264972/1-619 LFLKRDNLLI ADIELGCGNF GSVRQGVYRM RKKQIDVAIK VLKQGTEKAD ENSBTAP00000007743/1-617 LFLKRENLLM ADIELGCGNF GSVRQGVYRM RKKQIDVAIK VLKQSTEKAD ENSTTRP00000014799/1-613 LFLKRENLLM ADIELGCGNF GSVRQGVYRM CKKQIDVAIK VLKQNTEKAD bmy_06875T0/1-314 LFLKRENLLM ADIELGCGNF GSVRQGVYRM RKKQIDVAIK VLKQNTEKAD BACU017704/1-639 LFLKRENLLM ADIELGCGNF GSVRQGVYRM RKKQIDVAIK VLKQNTEKAD 401 450 ENSP00000264972/1-619 TEEMMREAQI MHQLDNPYIV RLIGVCQAEA LMLVMEMAGG GPLHKFLVGK ENSBTAP00000007743/1-617 KDEMMREAQI MHQLDNPYIV RLIGVCQAEA LMLVMEMAGG GPLHKFLVGK ENSTTRP00000014799/1-613 KDEMMREAQI MHQLDNPYIV RLIGVCQAEA LMLVMEMAGG GPLHKFLLGK bmy_06875T0/1-314 KDEMMREAQI MHQLDNPYIV RLIGVCQAED LMLVMEMAGS GPLHKFLLGK BACU017704/1-639 KDEMMREAQI MHQLDNPYIV RLIGVCQAED LMLVMEMAGG GPLHKFLLGK 451 500 ENSP00000264972/1-619 REEIPVSNVA ELLHQVSMGM KYLEEKNFVH RDLAARNVLL VNRHYAKISD ENSBTAP00000007743/1-617 KEEIPVSNVA ELLHQVSMGM KYLEEKNFVH RDLAARNVLL VNRHYAKISD ENSTTRP00000014799/1-613 KEEIPVSNVA ELLHQVSMGM KYLEEKNFVH RDLAARNVLL VNRHYAKISD bmy_06875T0/1-314 KEEIPVSNVA ELMHQVSMGM KYLEEKNFVH RDLAARNVLL VNRHYAKISD BACU017704/1-639 KEEIPVSNVA ELMHQVSMGM KYLEEKNFVH RDLAARNVLL VNRHYAKISD 501 550 ENSP00000264972/1-619 FGLSKALGAD DSYYTARSAG KWPLKWYAPE CINFRKFSSR SDVWSYGVTM ENSBTAP00000007743/1-617 FGLSKALGAD DSYYTARSAG KWPLKWYAPE CINFRKFSSR SDVWSYGVTM ENSTTRP00000014799/1-613 FGLSKALGAD DSYYTARSAG KWPLKWYAPE CINFRKFSSR SDVWGYGVTM bmy_06875T0/1-314 FGLSKALGAD DSYYTARSAG KWPLKWYAPE CINFRKFSSR SDVWGYGVTM BACU017704/1-639 FGLSKALGAD DSYYTARSAG KWPLKWYAPE CINFRKFSSR SDVWGYGVTM 551 600 ENSP00000264972/1-619 WEALSYGQKP YK--KMKGPE VMAFIEQGKR MECPPECPPE LYALMSDCWI ENSBTAP00000007743/1-617 WEAFSYGQKP YK--KMKGPE VMAFIEQGKR MECPPECPPE MYKLMSDCWT ENSTTRP00000014799/1-613 WEAFSYGQKP YK--KMKGPE VMAFIEQGKR MECPPECPPE MYKLMSDCWT bmy_06875T0/1-314 WEAFSYGQKP YKASKMKGPE VMAFIKQGKR MECPPECPPE MYKLMSDCWT BACU017704/1-639 WEAFSYGQKP YKASKMKGPE VMAFIKQGKR MECPPECPPE MYKLMSDCWT 601 650 ENSP00000264972/1-619 YKWEDRPDFL TVEQRMRACY YSLASKVEGP PGSTQKAEAA CA ENSBTAP00000007743/1-617 YKWEDRPDFA AVEQRMRTYY YSLATKAEEP AACGNGVEAA CP ENSTTRP00000014799/1-613 YKWEDRPDFL TVEQRMRTYY YSLASRAADP A-----AEAA CV bmy_06875T0/1-314 YKWEDRPDFL TVEQRMRTYY YSLASKAEDP AACGKGAEAA CV BACU017704/1-639 YKWEDRPDFL TVEQRMRTYY YSLASKAEDP AACGKGAEAA CV