KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:32:53 2014 Check: 00 .. Name: ENSP00000260129/1-853 Len: 885 Check: 3149 Weight: 1.00 Name: ENSBTAP00000007749/1-854 Len: 885 Check: 6964 Weight: 1.00 Name: ENSTTRP00000016342/1-852 Len: 885 Check: 1364 Weight: 1.00 Name: bmy_18448T0/1-810 Len: 885 Check: 9662 Weight: 1.00 Name: BACU002328/1-866 Len: 885 Check: 2457 Weight: 1.00 // 1 50 ENSP00000260129/1-853 MCCEKWSRVA EMFLFIEE-R EDCKILCLCS RAFVEDRKLY NLGLKGYYIR ENSBTAP00000007749/1-854 MYCKKWRPVA EMCLFLEDLR EGSRILCLCS RAFVEDRKLY NLGLKGYYVK ENSTTRP00000016342/1-852 MYCEKWSSVA EMCLFLEDLR EDSCILCLCS RAFVEDRKLC NLGLKGYYVK bmy_18448T0/1-810 MYCEKWSFVA EMCLFLEDLR EGSCILCLCS RAFVEDXKLC SLGLKGYYVK BACU002328/1-866 MYCEKWSFVA EMCLFLEDLR EGSCILCLCS RAFVEDRKLC SLGLKGYSIK 51 100 ENSP00000260129/1-853 DSGNNSGDQA TEEEEGGYSC GTAESHDSKG IGLDESELDS EAELMRSMGL ENSBTAP00000007749/1-854 DDDNSAGEQA TEEEEGGHSQ GPAEPHDNRC PDPDESELDS EAELMRSMGL ENSTTRP00000016342/1-852 DDGNSSXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_18448T0/1-810 DDGNSAGEQA AEEEEGGRSQ GTAESRDSKD VGPDESELDS EAELMRSMGL BACU002328/1-866 DDGNSAGEQA AEEEEGGRSQ GTAESRDSKD VGPDESELDS EAELMRSMGL 101 150 ENSP00000260129/1-853 PLQFGRITAH KDFEVSMNTR NKVKI---KK KKHQKKYLDE IVQESWRKEY ENSBTAP00000007749/1-854 PLQFGRMSAH KNFEESMNTR NKVKIMKKKK KKHQKKYLDE IKRESWRQ-C ENSTTRP00000016342/1-852 XXXXXXXXXX XXXXASMNTR NKVKR-KKKK KKHQKKYLDE IKRESWRREC bmy_18448T0/1-810 PLQFGRASAH KNFEVSMNTR NKVKI-KKKK KKHQKKYLDE IKRESWRQEC BACU002328/1-866 PLQFGRASAH KNFEVSMNTR NKVKI-KKKK KKHQKKYLDE LKRESWRQEC 151 200 ENSP00000260129/1-853 EEDDILASDD PSSIEQYENT RTYELQSKKD TETENPPVEN TLSPKLEITE ENSBTAP00000007749/1-854 EEDDVSASDD PSSSEN-ENT RKYKLQSQKG TEAESFPVEN TVGPKLEITE ENSTTRP00000016342/1-852 EEGDILASDD PSSSEN-ENT RRYELQTKKD IDGENLPAEN TLPPKLEVTE bmy_18448T0/1-810 EEDDILASDD PSSSEN-ENT RRYKLRTKKD IEGENLPAEN TLSPKLEITE BACU002328/1-866 EEDDILASDD PSSSEN-ENT RRCKLRTKKD IEAGNY---G ALGEVLEGT- 201 250 ENSP00000260129/1-853 KWEKYWNEYG GGLLWQSWQE KHPGQALSSE PWNFPDTK-E EWEQHYSQLY ENSBTAP00000007749/1-854 MWEKYWNEYG GGLLWQSWQE KHADQTLCPE PWNVPDTK-E EWEQHYSQMY ENSTTRP00000016342/1-852 LWEKYWKEYG GELLWQSWQE KHAGQTPCSE PWNVPNTK-A EWEQHYSQLY bmy_18448T0/1-810 LWEKYWKEHG GELLWQSWQE KHAGQTPCPE PWNVPHIK-Q EWEQHYSQLY BACU002328/1-866 RWGTAVAKLG ---------R KACRSDAVLR TLERPSYKAE EWEQHYSQLY 251 300 ENSP00000260129/1-853 WYYLEQFQYW EAQGWTFDAS QSCDTDTYTS KTEADDKNDE KCMKVDLVSF ENSBTAP00000007749/1-854 WYYLEQFQYW EAQGWTFDAS QSQDTDPGGS EIEVDNKKDE NHMKADELFS ENSTTRP00000016342/1-852 WYYLEQFQYW EAQGWTFEAS QSCDTDTCGS KTEVDNKKDE NRTKADELSS bmy_18448T0/1-810 WYYLEQFQYW EAQGWTFDAS QSCDTDTCGS KSEVDNKKDE NRTKADELSS BACU002328/1-866 WYYLEQFQYW EAQGWTFDAS QSCDTDTCGS KTEVDNKKDE SRTKADELSS 301 350 ENSP00000260129/1-853 PSSPIMVDND SSGTSDKDHS EILDGISNIK LNSEEVTQSQ LDSCTSHDGH ENSBTAP00000007749/1-854 PSLS--VGSE SSSSSDKDHS EILNGISNLS LNSEKVEQRQ LDPSLSCDGR ENSTTRP00000016342/1-852 ASSS--VGSE NSSSGDKDRN EILDGLSNIS LNSEEVEQSR SDPSVSCDGR bmy_18448T0/1-810 PSSS--MGSE SSSSSDKDHN EVLDGLSNIS LNSEEVEQSR LDPSVSCDGQ BACU002328/1-866 PSSS--MGSE SSSSSYKDHN EILDGLSNIS LNSEEVEQSR LDPSVSCDEQ 351 400 ENSP00000260129/1-853 QQLSEVSSKR ECPASGQSEP RNGGTNEESN SSGNTNTDPP AEDSQKSSGA ENSBTAP00000007749/1-854 QCLSEVPSRR ECPASGHSEP SHGGN-TESS LSGSRSTDQP AQDSQESSEA ENSTTRP00000016342/1-852 QR--EVNSRR ECPASGQSEP CNGGT-KESG LSGNRSTSQP AQDSQESSGA bmy_18448T0/1-810 QCLSEVNSGR ECPASGQSEP RNGGT-KESS LSGNRSTSQP AQDSQESSEA BACU002328/1-866 QCLSEVHSGR ECPASGQSEP RNGGT-KESS LSGNRSTSQP AQDSQESSEA 401 450 ENSP00000260129/1-853 NTSKDRPHAS GTDGDESEED PPEHKPSKLK RS-------- ---HELDIDE ENSBTAP00000007749/1-854 NTVRDGRHRS GTDGDESGDD PPEEKRSKLK RS-------- ---HELDLDE ENSTTRP00000016342/1-852 NTVKDSPRLI GTDGDESGED PPEQKPSSLK RS-------- ---HELDIDE bmy_18448T0/1-810 NTIKDRPRLI GTDGDESGED PPEQKPSKLK RRQVAHYLSL QNVHELDIDE BACU002328/1-866 NTIKDRPRLI GTDGDESGED PPEQKPSKLK RRQVAHYLSL QNVHELDIDE 451 500 ENSP00000260129/1-853 NPASDFDDSG SLLGFKYGSG QKYGGIPNFS HRQVRYLEKN VKLKSKYLDM ENSBTAP00000007749/1-854 NPDSDFDNDG SLLGFKHGSG QKYGGISNFS HRRVRYLQKN MKQKSKSLDM ENSTTRP00000016342/1-852 NPDSDFDVDG SLLGFKHGSG QKYGGISNVS HRRVRYLHKN VKYKAKYLDM bmy_18448T0/1-810 NPDSDFDVDG SLLGFKHGSG QKYGGISNFS HRXVRYLHKD VRYKSKYLDM BACU002328/1-866 NPDSDFDVDG SLLGFKHGSG QKYGGISNFS HRQVRYLHKD VKYKSKYLDM 501 550 ENSP00000260129/1-853 RRQIKMKNKH IFFTKESEKP FFKKSKILSK VEKFLTWVNK PMDEEASQES ENSBTAP00000007749/1-854 RRQINMKNKH IFFTEESEKT GFKKSRTLSK VEKFLKWVKE PVDEEASPES ENSTTRP00000016342/1-852 RRQIDMKHKH IFFTEEPGKT LLKKSKTLSK VEKFLKWVNE PMDDEASQEA bmy_18448T0/1-810 RRQINMKNKH IFFTEEPGKT LFKKSKTLSK VEKFLKWVNE PMDDEASQEP BACU002328/1-866 RRQINMKNKH IFFTEEPGKT LFKKSKTLSK VEKFLKWVNE PMDDEASQEP 551 600 ENSP00000260129/1-853 SSHDNVHDAS TSSDSEEQDM SVKKGDDLLE TNNPEPEKCQ SVSSAGELET ENSBTAP00000007749/1-854 VSHNNMQDTC TSSGSEEPEV SVEKGDDPVE MSEAEPGQHP AVCPAGEVGA ENSTTRP00000016342/1-852 VSHNNVQDTC TSSGSEEQEV SVGKGDDPPE TSEPEPGKRR AMSPAGEVGT bmy_18448T0/1-810 VSHNNVQDTC TSSGSEEQEV SVEKGDDPPE TSEPEPGKRR AMPPAGEVGT BACU002328/1-866 VSHNNVQDTC TSSGSEEQEV SVEKGDDPPE TSEPEPGTRR AVSPAGEVGT 601 650 ENSP00000260129/1-853 ENYERDSLLA TVPDEQDCVT QEVPDSRQAE TEAEV---KK KKNKKKNKKV ENSBTAP00000007749/1-854 ETHDGTSPEA AGTDTEGCVP QAASDPRQEE AEAES--QKK KKKKKKNKKE ENSTTRP00000016342/1-852 EKTDRDSTAA AVPDEGDCPA QAAPDRLQEE AEAEN-KKKK KKKKSKNRKG bmy_18448T0/1-810 EKTDRDSTEA AVPDEGDCPA QAAPDRLQVE AEAENKKKKK KKKKSKNRKG BACU002328/1-866 EKTDRDSTGA AVPAEGDGPA QAAPDRLQVE AEAEN-KKKK KKKKSKNRKG 651 700 ENSP00000260129/1-853 NGLPPEIAAV PELAKYWAQR YRLFSRFDDG IKLDREGWFS VTPEKIAEHI ENSBTAP00000007749/1-854 LNLPPDIAAV PELVKYWAQR YRLFSRFDDG IKLDREGWFS VTPEKIAEHI ENSTTRP00000016342/1-852 IGLPPEITAV PELAKYWAQR YRLFSRFDDG IKLDREGWFS VTPEKIAEHI bmy_18448T0/1-810 ISLPPEITAT PSPLA----- ---------- -----EGWFS VTPEKIAEHI BACU002328/1-866 IGLPPEITAV PELAKYWAQR YRLFSRFDDG IKLDREGWFS VTPEKIAEHI 701 750 ENSP00000260129/1-853 AGRVSQSFKC DVVVDAFCGV GGNTIQFALT GMRVIAIDID PVKIALARNN ENSBTAP00000007749/1-854 AGRVSQSLES GTIVDAFCGV GGNTIQFALT GKRVIAIDID PVKIDLARNN ENSTTRP00000016342/1-852 AGRVSQSFQC DTVVDAFCGV GGNTIQFALT GKRVIAVDID PVKIDLARHN bmy_18448T0/1-810 AGRVSQCSRC DTVVDAFCGV GGNTIQFALT GKRVIAIDID PVKIDLARNN BACU002328/1-866 AGRVSGCSGC DTVVDAFCGV GGNTIQFALT GKRVIAIDID PVKIDLARNN 751 800 ENSP00000260129/1-853 AEVYGIADKI EFICGDFLLL ASFLKADVVF LSPPWGGPDY ATAETFDIRT ENSBTAP00000007749/1-854 AEIYGVVDKI EFICGDFLQL ASSLKADVVF LSPPWGGPDY ATAEIFDIST ENSTTRP00000016342/1-852 AEIYGVADKI EFICGDFLQL ASHLKADVVF LSPPWGGPDY ATAEIFDIST bmy_18448T0/1-810 AEIYGVADKI EFICGDFLQL APRLKADVVF LSPPWGGPDY ATAEIFDIST BACU002328/1-866 AEIYGVAEKI EFICGDFLQL ASHLKADVVF LSPPWGGPDY ATAEIFDIST 801 850 ENSP00000260129/1-853 MMSPDG--FE IFR------- ----LSKKIT NNIVYFLPRN ADIDQVASLA ENSBTAP00000007749/1-854 MMSPDS-TFE IFR------- ----LAQKIT NNIVFFLPRN ADTDQVASLA ENSTTRP00000016342/1-852 MMSPDG--FE IFR------- ----LSQKIT NNIIYFLPRN ANIDQVASLA bmy_18448T0/1-810 MMSPDGYPFE VLR------- ---------- ---------- -----VSSSS BACU002328/1-866 MMSPDGYPLE VLRVSSSSGC GEKGLSQKIT NNIIYFLPRN ANIDQVASLA 851 900 ENSP00000260129/1-853 GPGGQVEIEQ NFLNNKLKTI TAYFGDLIRR PASET ENSBTAP00000007749/1-854 GPGGQVEIEQ NFLNNRLKTI TAYFGDLIRR STSES ENSTTRP00000016342/1-852 GPGGQVEIEQ NFLNNRLKTI TAYFGKLIRR SASES bmy_18448T0/1-810 GCGE------ -------KGW RPWLGLEGKW K---- BACU002328/1-866 GPGGQVEIEQ NFLNNRLKTI TAYFGELIRR SASES