KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:32:56 2014 Check: 00 .. Name: ENSTTRP00000008905/1-655 Len: 771 Check: 2726 Weight: 1.00 Name: ENSBTAP00000007768/1-771 Len: 771 Check: 8384 Weight: 1.00 Name: ENSP00000300146/1-770 Len: 771 Check: 5265 Weight: 1.00 Name: bmy_16752T0/1-766 Len: 771 Check: 162 Weight: 1.00 // 1 50 ENSTTRP00000008905/1-655 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000007768/1-771 MFRYESLEDC PLDEDEDAFQ GLGEEDEEID QFNDDTFGSG AVDDDWQEAH ENSP00000300146/1-770 MFRYESLEDC PLDEDEDAFQ GLGEEDEEID QFNDDTFGSG AVDDDWQEAH bmy_16752T0/1-766 -----SLEDC PLDEDEDAFQ GLGEEDEEID QFNDDTFGSG AVDDDWQEAH 51 100 ENSTTRP00000008905/1-655 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000007768/1-771 ERLAELEEKL PAAVNEQSGN GERDEMDLLG DHEENLAERL SKMVIENELE ENSP00000300146/1-770 ERLAELEEKL PVAVNEQTGN GERDEMDLLG DHEENLAERL SKMVIENELE bmy_16752T0/1-766 ERLAELEEKL PVAVNEQTGN GERDEMDLLG DHEENLAERL SKMVIENELE 101 150 ENSTTRP00000008905/1-655 ---------- -----PRPGS LNSSIWDGSE VLRRIRGPLL AQEMPTVSVL ENSBTAP00000007768/1-771 DPAIMRAVQT RPVLQPQPGS LNSSIWDGSE VLRRIRGPLL AQEMPTVSVL ENSP00000300146/1-770 DPAIMRAVQT RPVLQPQPGS LNSSIWDGSE VLRRIRGPLL AQEMPTVSVL bmy_16752T0/1-766 DPAIMRAVQT RPVLQPRPGS LNSSIWDGSE VLRRIRGPLL AQEMPTVSVL 151 200 ENSTTRP00000008905/1-655 EYALPQRPPQ GPEDDRDVSE RALPRRSTSP IIGSPPVRAV PIGTPPKQMA ENSBTAP00000007768/1-771 EYALPQRPPQ GPEDDRDLSE RALPRRSTSP VIGSPPVRAV PIGTPPKQMA ENSP00000300146/1-770 EYALPQRPPQ GPEDDRDLSE RALPRRSTSP IIGSPPVRAV PIGTPPKQMA bmy_16752T0/1-766 EYALPQRPPQ GPEDDRDVSE RALPRRSTSP IIGSPPVRAV PIGTPPKQMA 201 250 ENSTTRP00000008905/1-655 VPSFNQQVLC PKPVHVRPPM PPRYPAPYGE RMSPNQLCSV PNSSLLGHPF ENSBTAP00000007768/1-771 VPSFNQQILC PKPVHVRPPM PPRYPAPYGE RMSPNQLCSV PNSSLLGHPF ENSP00000300146/1-770 VPSFTQQILC PKPVHVRPPM PPRYPAPYGE RMSPNQLCSV PNSSLLGHPF bmy_16752T0/1-766 VPSFNQQILC PKPVHVRPPM PPRYPAPYGE RMSPNQLCSV PNSSLLGHPF 251 300 ENSTTRP00000008905/1-655 PPSVPPVLSP LQRAQLLGGA QXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000007768/1-771 PPSVPPVLSP LQRAQLLGGA QLQPGRMSPS QFARVPGFVG SPLAAMNPKL ENSP00000300146/1-770 PPSVPPVLSP LQRAQLLGGA QLQPGRMSPS QFARVPGFVG SPLAAMNPKL bmy_16752T0/1-766 PPSVPPVLSP LQRAQLLGGA QLQPGRMSPS QFARVPGFVG SPLAAMNPKL 301 350 ENSTTRP00000008905/1-655 XXXXXXXXXX XXXXXXXXXX XX-XXXXXXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000007768/1-771 LQGRIGQMLP PAPGFRAFFS APPPTTPPPP QQHPPGPGPH LQNLRSQAPM ENSP00000300146/1-770 LQGRVGQMLP PAPGFRAFFS AP-PSATPPP QQHPPGPGPH LQNLRSQAPM bmy_16752T0/1-766 LQGRVGQMLP PAPGFRAFFS APAPATPPPP QQHPPGPGPH LQNLRSQAPM 351 400 ENSTTRP00000008905/1-655 XXXXXXXXXX XXXXXXXXXX XXXXXQHRNL NGAGDRGSHR SSHQDHLRKD ENSBTAP00000007768/1-771 FRPDTTHLHP QHRRLLHQRQ QQNRNQHRNL NGAGDRGSHR SSHQDHIRKD ENSP00000300146/1-770 FRPDTTHLHP QHRRLLHQRQ QQNRSQHRNL NGAGDRGSHR SSHQDHLRKD bmy_16752T0/1-766 FRPDTTHLHP QHRRLLHQRQ QQNRNQHRNL NGAGDRGSHR SSHQDHLRKD 401 450 ENSTTRP00000008905/1-655 PYANLMLQRE KDWVSKIQMV QLQSTDPYLD DFYYQNYFEK LEKLSAAEEV ENSBTAP00000007768/1-771 PYANLMLQRE KDWVSKIQMM QLQSTDPYLD DFYYQNYFEK LEKLSAAEEM ENSP00000300146/1-770 PYANLMLQRE KDWVSKIQMM QLQSTDPYLD DFYYQNYFEK LEKLSAAEEI bmy_16752T0/1-766 PYANLMLQRE KDWVSKIQMM QLQSTDPYLD DFYYQNYFEK LEKLSAAEEV 451 500 ENSTTRP00000008905/1-655 QGDGPKKERT KLITPQVAKL EHAYKPVQFE GSLGKLTVSS VNNPRKMIDA ENSBTAP00000007768/1-771 QGDGPKKERT KLITPQVAKL EHTYKPVQFE GSLGKLTVSS VNNPRKMIDA ENSP00000300146/1-770 QGDGPKKERT KLITPQVAKL EHAYKPVQFE GSLGKLTVSS VNNPRKMIDA bmy_16752T0/1-766 QGDGPKKERT KLITPQVAKL EHAYKPVQFE GSLGKLTVSS VNNPRKMIDA 501 550 ENSTTRP00000008905/1-655 VVTSRSEDDE TKEKQVRDKR RKTLVIIEKT YSLLLDVEDY ERRYLLSLEE ENSBTAP00000007768/1-771 VVTSRSEDDE TKEKQVRDKR RKTLFIIEKT YSLLLDVEDY ERRYLLSLEE ENSP00000300146/1-770 VVTSRSEDDE TKEKQVRDKR RKTLVIIEKT YSLLLDVEDY ERRYLLSLEE bmy_16752T0/1-766 VVTSRSEDDE TKEKQVRDKR RKTLVIIEKT YSLLLDVEDY ERRYLLSLEE 551 600 ENSTTRP00000008905/1-655 ERPALMDERK HKICSMYDNL RGKLPGQERP SDDHFVQIMC IRKGKRMVAR ENSBTAP00000007768/1-771 ERPALMDERK HKICCMYDNL RGKLPGQERP SDDHFVQIMC IRKGKRMVAR ENSP00000300146/1-770 ERPALMDDRK HKICSMYDNL RGKLPGQERP SDDHFVQIMC IRKGKRMVAR bmy_16752T0/1-766 ERPALMDERK HKICSMYDNL RGKLPGQERP SDDHFVQIMC IRKGKRMVAR 601 650 ENSTTRP00000008905/1-655 ILPFLSTEQA ADILMTTARN LPFLIKKDAQ DEVLPCLLSP FSLLLYHLPS ENSBTAP00000007768/1-771 ILPFLSTEQA ADILMTTARN LPFLIKKDAQ DEVLPCLLSP FSLLLYHLPP ENSP00000300146/1-770 ILPFLSTEQA ADILMTTARN LPFLIKKDAQ DEVLPCLLSP FSLLLYHLPS bmy_16752T0/1-766 ILPFLSTEQA ADILMTTARN LPFLIKKDAQ DEVLPCLLSP FSLLLYHLPS 651 700 ENSTTRP00000008905/1-655 ATVTSLLQQL MNLPQSAAAP APSNPHLTAV LQNKFGLSLL LLVLSRGEDL ENSBTAP00000007768/1-771 VTVTSLLQQL MNLPQSAAAP APSNPHLSAV LQNKFGLSLL LVVLSRGEDL ENSP00000300146/1-770 VSITSLLRQL MNLPQSAATP ALSNPHLTAV LQNKFGLSLL LILLSRGEDL bmy_16752T0/1-766 VTVTSLLQQL MNLPQSAAAP APANPHLTAV LQNKFGLSLL LVVLSRGEDL 701 750 ENSTTRP00000008905/1-655 QGSDPTSEST QSNQWTEVMF LATRELLRIP QAALAKPVSI PTNLVSLFSR ENSBTAP00000007768/1-771 QSSDAASELA QSNPWTEVMF VATRELLRIP QTGLAKPISI PTNLVSLFSR ENSP00000300146/1-770 QSSDPATEST QNNQWTEVMF MATRELLRIP QAALAKPISI PTNLVSLFSR bmy_16752T0/1-766 QSSDPTSEST QSNQWTEVMF MATRELLRIP QAALAKPISI PTNLVSLFSR 751 800 ENSTTRP00000008905/1-655 YVDRQKLNLL ETKLQLVQGI R ENSBTAP00000007768/1-771 YVDRQKLNLL ETKLQLVQGI R ENSP00000300146/1-770 YVDRQKLNLL ETKLQLVQGI R bmy_16752T0/1-766 YVDRQKLNLL ETKLQLVQGI R