KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:32:59 2014 Check: 00 .. Name: ENSBTAP00000007784/1-486 Len: 486 Check: 7947 Weight: 1.00 Name: BACU009903/1-483 Len: 486 Check: 3003 Weight: 1.00 Name: bmy_15143T0/1-323 Len: 486 Check: 5976 Weight: 1.00 Name: ENSTTRP00000001604/1-486 Len: 486 Check: 4228 Weight: 1.00 // 1 50 ENSBTAP00000007784/1-486 MPRGPCSLVR VSATPVAVLA VALVSSLSRC SLLEPENSVV SALSPYFGTK BACU009903/1-483 MLRGPCRLFR VSVAPVAALA VALVSSLSRC SLLEPENRVV SPLSPYFGTK bmy_15143T0/1-323 MLPCPCRLFR VSVAPVAALA VALVSSLSRC SLLEPENRVV SPLSPYFGTK ENSTTRP00000001604/1-486 MLRGPCRLFR VSVAPVAALA VALVSSLSRC SLLEPENRVV SPLSPYFGTK 51 100 ENSBTAP00000007784/1-486 TRYEDANPGL LPDPEVPRRD PELLEETCTP VQLVALIRHG TRYPTTKQIR BACU009903/1-483 TRYEDANPGL LPDPEAPRRD PQLLEETCTP VQLVALIRHG TRYPTTKQIR bmy_15143T0/1-323 TRYEDANPGL LPDPEAPRRD PQLLEETCTP VQLVALIRHG TRYPTTKQIR ENSTTRP00000001604/1-486 TRYEDANPGL LPDPEAPRRD PQLLEETCTP VQLVALIRHG TRYPTTKQIR 101 150 ENSBTAP00000007784/1-486 KLRQLHGLLQ ARGAEDDRTR AAGRGDLGAA LADWPLWYAD WMDGQLVEKG BACU009903/1-483 KLRQLHGLLR ARGPGDDRTR AAGG---GGP XXXXXXXYAD WMAGQLVEKG bmy_15143T0/1-323 KLRQLHGLLQ ARGPGDDRTR AAGGGALGAA LADWPLWYAD WMDGQLVEKG ENSTTRP00000001604/1-486 KLRQLHGLLQ ARGPGDDRIR AAGGGDLGAV LANWPLWYAD WMDGQLVEKG 151 200 ENSBTAP00000007784/1-486 RQDMRQLALR LASLFPALFS RENYGRLQLV TSSKHRCVDS GAAFLQGLWQ BACU009903/1-483 RQDMRQLALR LASLFPVLFS RENRGRLQLV TSSKHRCVDS GAAFLQGLWQ bmy_15143T0/1-323 RQDMRQLALR LASLFPVLFS RENCGRLQLV TSSKHRCVDS GAAFLQGLWQ ENSTTRP00000001604/1-486 RQDMRQLALR LASLFPVLFS RENCGRLQLV TSSKHRCMDS GAAFLQGLWQ 201 250 ENSBTAP00000007784/1-486 HYHPGLPPPD IADMECGPPR INDKLMRFFD HCEKFLTQVE RNATALYHVE BACU009903/1-483 HYHPGLPPPD VADMECGPPR INDKLMRFFD HCEKFLTQVE RNATALYHVE bmy_15143T0/1-323 HYHPGLPPPD VA-------- ---------- --------VE RNATALYHVE ENSTTRP00000001604/1-486 HYHPGLPPPD VADMECGPPR INDKLMRFFD HCEKFLTQVE RNATALYHVE 251 300 ENSBTAP00000007784/1-486 AFKTGPEMQN ILKKVADILQ VPVNNLNADL IQVAFFTCSF DLAIKGVKSP BACU009903/1-483 AFKTGPEMQN ILKKVAGILQ VPVNNLNADL IQVAFFTCSF DLAIKGVKSP bmy_15143T0/1-323 AFKTGPEMQN ILKKVAGILQ VPVNNLNADL IQVAFFTCSF DLAIKGVKSP ENSTTRP00000001604/1-486 AFKTGPEMQN ILKKVAGILQ VPVNNLNADL IQVAFFTCSF DLAIKGVKSP 301 350 ENSBTAP00000007784/1-486 WCDVFDIDDA KVLEYLNDLK QYWKRGYGYS INSRSSCTLF QDIFQHLDKA BACU009903/1-483 WCDVFDIDDA KVLEYLNDLK QYWKRGYGYT INSQSSCTLF QDIFQHLDKA bmy_15143T0/1-323 WCDVFDIDDA KV-------- ---------- ---------- ---------- ENSTTRP00000001604/1-486 WCDVFDIDDA KXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX 351 400 ENSBTAP00000007784/1-486 VKQKQRSQPV SSPVILQFGH AETLLPLLSL MGYFKDKEPL TAYNYKEQMH BACU009903/1-483 VEQKQSSQPI SSPVILQFGH AETLLPLLSL MGYFKDKEPL TAYNYKEQMH bmy_15143T0/1-323 --------SI TFAVSLLF-- ---FFAWFSL LSLF------ -----EAAFQ ENSTTRP00000001604/1-486 XXXXXXSQPV SSPVILQFGH AETLLPLLSL MGYFKDKEPL TAYNYKEQMH 401 450 ENSBTAP00000007784/1-486 RKFRSGHIVP YASNLIFVLY HCKNAKTPKE EFRVQMLLNE KVLPLAHSQE BACU009903/1-483 RKFRSGHIVP YASNLIFVLY HCKNAKTPKE EFQVQMLLNE KVLPLAHSQE bmy_15143T0/1-323 KISGVGNI-- ---------- ---------- ---------- ---------- ENSTTRP00000001604/1-486 RKFRSGHIVP YASNLIFVLY HCKNAKTPKE EFQVQMLLNE KVLPLAHSQE 451 500 ENSBTAP00000007784/1-486 TVSLYEDLKN HYKDILQSCH TSEECELPKV NTSDEL BACU009903/1-483 TVSLYEDLKN HYKDILQSCH TSEKCELPKV NTSDEL bmy_15143T0/1-323 ---------- ---------- ---KC----- -----L ENSTTRP00000001604/1-486 TVSLYEDLKN HYKDILQSCH TSEECELPKV NTSDEL