KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:33:04 2014 Check: 00 .. Name: bmy_17119T0/1-535 Len: 677 Check: 3045 Weight: 1.00 Name: ENSP00000258796/1-523 Len: 677 Check: 1232 Weight: 1.00 Name: ENSBTAP00000007792/1-525 Len: 677 Check: 2025 Weight: 1.00 Name: ENSTTRP00000009193/1-524 Len: 677 Check: 8874 Weight: 1.00 Name: BACU005502/1-490 Len: 677 Check: 4558 Weight: 1.00 // 1 50 bmy_17119T0/1-535 MARLTSGR-- -----HQPLP PAPAWQ---- ---PRG---- RGLCLLGA-- ENSP00000258796/1-523 MAGVSYAAPW WVSLLHRLPH FDLSWEATSS QFRPEDTDYQ QALLLLGAAA ENSBTAP00000007792/1-525 MAGVSYTAPW WVSLLHRLPH FDLHWEATSS QFRPEDSDYQ QALLLLGAAA ENSTTRP00000009193/1-524 MAGVSYAAPW WVSLLHRLPH FNLRWETTSS QFRPEDTDYQ QALLLLGAAA BACU005502/1-490 MAGVSYAAPW WVSLLHRLPH FDLHWETTSS QFRPEDTDYQ QALLLLGAAA 51 100 bmy_17119T0/1-535 --CQAL---- ---------- ---------- ---------- ---------- ENSP00000258796/1-523 LACLALDLLF LLFYSFWLCC RRRKSEEHLD ADCCCTAWCV IIATLVCSAG ENSBTAP00000007792/1-525 LACLALDLIF LLFYSFWLCC RRRKSEEHLD ADCCCTAWCV IIATLVCSAG ENSTTRP00000009193/1-524 LACLALDLLF LLVYSFWLCC RRRKSEEHLD ADCCCTAWCV IIATLVCSAG BACU005502/1-490 LACLALDLLF LLVYSFWLCC RRRKSEEHLD ADCCCTAWCV IIATLVCSAG 101 150 bmy_17119T0/1-535 ---------- APDTFPRQA- ---------- -----VWDTA AALNRSAEPS ENSP00000258796/1-523 IAVGFYGNGE TSDGIHRATY SLRHANRTVA GVQDRVWDTA VGLNHTAEPS ENSBTAP00000007792/1-525 IAVGFYGNGE TSDGIHRATY SLRHANRTVA GVQDRVWDTA AALNRTAEPS ENSTTRP00000009193/1-524 IAVGFYGNGE TSDGIHRATY SLRHANRTVA GVQDRVWDTA AALNRSAEPS BACU005502/1-490 IAVGFYGNGE TSDGIHRATY SLRHANRTVA GVQDR----- --------PS 151 200 bmy_17119T0/1-535 LQSLERQLAA RPEPLRAVQR LQGLLETLLG YTAAIPFWRN PAVSLEALAE ENSP00000258796/1-523 LQTLERQLAG RPEPLRAVQR LQGLLETLLG YTAAIPFWRN TAVSLEVLAE ENSBTAP00000007792/1-525 LQSLERQLAT RPEPLRAVQR LQGLLQTLLG YTAAIPFWRN PAVSLEALAE ENSTTRP00000009193/1-524 LQSLERQLAA RPEPLRAVQR LQSLLETLLG YTAAIPFWRN PAVSLEALAE BACU005502/1-490 LQSLERQLAA RPEPLRAVQR LQGLLETLLG YTAAIPFWRN PAVSLEALAE 201 250 bmy_17119T0/1-535 QVDLYDWYRW LGYLGLLLLD VAICLLVLVG LIRSSKGILV GVCLLGVLAL ENSP00000258796/1-523 QVDLYDWYRW LGYLGLLLLD VIICLLVLVG LIRSSKGILV GVCLLGVLAL ENSBTAP00000007792/1-525 QVDLYDWYRW LGYLGLLLLD VAICLLVLVG LIRSSKGILV GVCLLGVLAL ENSTTRP00000009193/1-524 QVDLYDWYRW LGYLGLLLFD VAICLLVLVG LIRSSKGILV GVCLLGVLAL BACU005502/1-490 QVDLYDWYRW LGYLGLLLLD VAICLLVLVG LIRSSKGILV GVCLLGVLAL 251 300 bmy_17119T0/1-535 IISWGALGLE LAVSVGSSDF CVDPDPYVAR MVEEHSVLSG DILQYYLACS ENSP00000258796/1-523 VISWGALGLE LAVSVGSSDF CVDPDAYVTK MVEEYSVLSG DILQYYLACS ENSBTAP00000007792/1-525 IISWGALGLE LAVSVGSSDF CVDPDTYVTR MVEEHSVLSG DILQYYLACS ENSTTRP00000009193/1-524 IISWGALGLE LAVSVGSSDF CVDPDTYVTR MVEEHSVLSG DILQYYLACS BACU005502/1-490 IISWGALGLE LAVSVGSSDF CVDPDTYVTR MVEERSVLSG DILQYYLACS 301 350 bmy_17119T0/1-535 PRAANPFQQA APAIPVGQSR LSGGGGRSPG MPHGSRGPVP ALWNKWMDVV ENSP00000258796/1-523 PRAANPFQQ- ---------- ---------- ---------- ---------- ENSBTAP00000007792/1-525 PHAANPFQQ- ---------- ---------- ---------- ---------- ENSTTRP00000009193/1-524 PRAANPFQQ- ---------- ---------- ---------- ---------- BACU005502/1-490 PRAANPFQQ- ---------- ---------- ---------- ---------- 351 400 bmy_17119T0/1-535 TVECEGKPCS PLPVIPRNCV ALWGPQDCLS ALKTLYFHRV ASGERCPTGP ENSP00000258796/1-523 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000007792/1-525 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000009193/1-524 ---------- ---------- ---------- ---------- ---------- BACU005502/1-490 ---------- ---------- ---------- ---------- ---------- 401 450 bmy_17119T0/1-535 QSRLPGTAIP PHELVASQAG RPLGRQKPKA LELACAVCGW GPRGGGDGCP ENSP00000258796/1-523 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000007792/1-525 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000009193/1-524 ---------- ---------- ---------- ---------- ---------- BACU005502/1-490 ---------- ---------- ---------- ---------- ---------- 451 500 bmy_17119T0/1-535 TPAGISRPLC EQKLSGSHKA LVEMQDVVAE LLKTVPREHP AAKDPLLRVQ ENSP00000258796/1-523 ---------- --KLSGSHKA LVEMQDVVAE LLRTVPWEQP ATKDPLLRVQ ENSBTAP00000007792/1-525 ---------- -QKLSGSHKA LVEMQDVVAE LLKTVSWEHP ATKDPLLRVQ ENSTTRP00000009193/1-524 ---------- --KLSGSHKA LVEMQDVVAE LLKTVPREHP AAKDPLLRVQ BACU005502/1-490 ---------- ---------- ---------- ---SVPREQP AAKDPLLRVQ 501 550 bmy_17119T0/1-535 EVLNGTEVNL QHLTALVDCR SLHL------ ---------- ---------- ENSP00000258796/1-523 EVLNGTEVNL QHLTALVDCR SLHLDYVQAL TGFCYDGVEG LIYLALFSFV ENSBTAP00000007792/1-525 EVLNGTEVNL QHLTALVDCR SLHLDYVQAL TGFCYDGVEG LIYLALFSFV ENSTTRP00000009193/1-524 EVLNGTEVNL QHLTALVDCR SLHLDYVQAL TGFCYDGVEG LIYLALFSFV BACU005502/1-490 EVLNGTEVNL QHLTALVDCR SLHLDYMQAL TGFCYDGVEG LIYLALFSFV 551 600 bmy_17119T0/1-535 ---------- ---------- ----DGEEEA APGPRQAHDS LYRVHMPSLY ENSP00000258796/1-523 TALMFSSIVC SVPHTWQQKR GPDEDGEEEA APGPRQAHDS LYRVHMPSLY ENSBTAP00000007792/1-525 TALMFSSVVC SVPHTWQQKR GPDEDGEEEA APGPRQAHDS LYRVHMPSLY ENSTTRP00000009193/1-524 TALMFSSIVC SVPHTWQQKR GPDEDGGEEA APGPRPAHDS LYRVHMPSLY BACU005502/1-490 TALMFSSIVC SVPHTWQQKR GPDEDGEEEA APGPRQAHDS LYRVHMPSLY 601 650 bmy_17119T0/1-535 SCGSSYGSET SIPAAAHTVS NAPVTEYMSQ NANFQNPRCE NTPLIGRESP ENSP00000258796/1-523 SCGSSYGSET SIPAAAHTVS NAPVTEYMSQ NANFQNPRCE NTPLIGRESP ENSBTAP00000007792/1-525 SCGSSYGSEA SIPAAAHTVS NAPVTEYMSQ NANFQNPRCE NTPLIGRESP ENSTTRP00000009193/1-524 SCGSSYGSET SIPAAAHTVS NAPVTEYMSQ NANFQNPRCE NTPLIGRESP BACU005502/1-490 SCGSSYGSET SIPAAAHTVS NAPVTEYMSQ NANFQNPRCE NTPLIGRESP 651 700 bmy_17119T0/1-535 PPSYTSSMRA KYLATSQPRP NSSSSGH ENSP00000258796/1-523 PPSYTSSMRA KYLATSQPRP DSSGS-H ENSBTAP00000007792/1-525 PPSYTSSMRA KYLATSQPRP ESSSSGH ENSTTRP00000009193/1-524 PPSYTSSMRA KYLATSQPRP NSSSSGH BACU005502/1-490 PPSYTSSMRA KYLATSQPRP NSSSSGH