KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:33:06 2014 Check: 00 .. Name: ENSP00000359474/1-387 Len: 390 Check: 4159 Weight: 1.00 Name: ENSBTAP00000007796/1-380 Len: 390 Check: 4748 Weight: 1.00 Name: ENSTTRP00000011761/1-380 Len: 390 Check: 8353 Weight: 1.00 Name: bmy_17255T0/1-380 Len: 390 Check: 4613 Weight: 1.00 Name: BACU006375/1-380 Len: 390 Check: 3928 Weight: 1.00 // 1 50 ENSP00000359474/1-387 -MTMEGASGS SFGIDTILSS ASSGSPGMMN GDFRPLGEAR TADFRSQATP ENSBTAP00000007796/1-380 ---MEGASGS SFGIDTILSS ASSGSPGMMN GDFRPLGEAR TADFRSQATP ENSTTRP00000011761/1-380 MTTMEGASGS SFGINTILSS ASSGSPGMMN GDFRPLGEAR TADFRSQATP bmy_17255T0/1-380 ---MEGASGS SFGIDTILSS ASSGSPGMMN GDFRPLGEAR TADFRSQATP BACU006375/1-380 ---MEGASGS SFGIDTILSS ASSGSPGMMN GDFRPLGEAR TADFRSQATP 51 100 ENSP00000359474/1-387 SPCSEIDTVG TAPSSPISVT MEPPEPHLVA DATQHHHHLH HSQQ--PPPP ENSBTAP00000007796/1-380 SPCSEIDTVG TAPSSPISVT MEPPEPHLIA DGPQHHHHLH HSQQ---PPP ENSTTRP00000011761/1-380 SPCSEIDTVG TAPSSPISVA MEPPEPHVIA DGPQHHHHLH HSQQ--PPPP bmy_17255T0/1-380 SPCSEIDTVG TAPSSPISVA MEPPEPHVIA DGPQHHHHLH HSQQPPPPPP BACU006375/1-380 SPCSEIDTVG TAPSSPISVA MEPPEPHVIA DGPQHHHHLH HSQQPPPPPP 101 150 ENSP00000359474/1-387 AAAPTQSLQP LPQQQQPLPP QQPPPPPPQQ LGSAASAPRT STSSFLIKDI ENSBTAP00000007796/1-380 AAAPPQSLQP SPQQQQQ--- -PPPPPAAQQ LGSAASAPRT STSSFLIKDI ENSTTRP00000011761/1-380 AAAPTQSLQP SPQ------- -RPPQPPAQQ LGSAASVPRT STSSFLIKDI bmy_17255T0/1-380 AAAPTQSLQP SPQP------ -PPPQPPAQQ LGSAASVPRT STSSFLIKDI BACU006375/1-380 AAAPTQSLQP SPQP------ -PAPQPPAQQ LGSAASVPRT STSSFLIKDI 151 200 ENSP00000359474/1-387 LGDSKPLAAC APYSTSVSSP HHTPKQESNA VHESFRPKLE QEDSKTKLDK ENSBTAP00000007796/1-380 LGDSKPLAAC APYSTSVSSP HHTPKQESNA AHESFRPKLE QEDSKTKLDK ENSTTRP00000011761/1-380 LGDSKPLAAC APYSTSVSSP HHTPKQESNA AHESFRPKLE QEDSKTKLDK bmy_17255T0/1-380 LGDSKPLAAC APYSTSVSSP HHTPKQESNA AHESFRPKLE QEDSKTKLDK BACU006375/1-380 LGDSKPLAAC APYSTSVSSP HHTPKQESNA AHESFRPKLE QEDSKTKLDK 201 250 ENSP00000359474/1-387 REDSQSDIKC HGTKEEGDRE ITSSRESPPV RAKKPRKART AFSDHQLNQL ENSBTAP00000007796/1-380 REESQSDVKC HGTKEEGDRE ISSSRESPPV RAKKPRKART AFSDHQLNQL ENSTTRP00000011761/1-380 REESQSDIKC HGTKEEGDRE ITSSRESPPV RAKKPRKART AFSDHQLNQL bmy_17255T0/1-380 REESQSDIKC HGTKEEGDRE ITSSRESPPV RAKKPRKART AFSDHQLNQL BACU006375/1-380 REESQSDIKC HGTKEEGDRE ITSSRESPPV RAKKPRKART AFSDHQLNQL 251 300 ENSP00000359474/1-387 ERSFERQKYL SVQDRMDLAA ALNLTDTQVK TWYQNRRTKW KRQTAVGLEL ENSBTAP00000007796/1-380 ERSFERQKYL SVQDRMDLAA ALNLTDTQVK TWYQNRRTKW KRQTAVGLEL ENSTTRP00000011761/1-380 ERSFERQKYL SVQDRMDLAA ALNLTDTQVK TWYQNRRTKW KRQTAVGLEL bmy_17255T0/1-380 ERSFERQKYL SVQDRMDLAA ALNLTDTQVK TWYQNRRTKW KRQTAVGLEL BACU006375/1-380 ERSFERQKYL SVQDRMDLAA ALNLTDTQVK TWYQNRRTKW KRQTAVGLEL 301 350 ENSP00000359474/1-387 LAEAGNYSAL QRMFPSPYFY HPSLLGSMDS TTAAAAAAAM YSSMYRTPPA ENSBTAP00000007796/1-380 LAEAGNYSAL QRMFPSPYFY HPSLLGSMDS TTAAAAAAAM YSSMYRTPPA ENSTTRP00000011761/1-380 LAEAGNYSAL QRMFPSPYFY HPSLLGSMDS TTAAAAAAAM YSSMYRTPPA bmy_17255T0/1-380 LAEAGNYSAL QRMFPSPYFY HPSLLGSMDS TTAAAAAAAM YSSMYRTPPA BACU006375/1-380 LAEAGNYSAL QRMFPSPYFY HPSLLGSRDS TTAAAAAAAM YSSMYRTPPA 351 400 ENSP00000359474/1-387 PHPQLQRPLV PRVLIHGLGP GGQPALNPLS SPIPGTPHPR ENSBTAP00000007796/1-380 PHPQLQRPLV PRVLIHGLGP GGQPALNPLS NPIPGTPHPR ENSTTRP00000011761/1-380 PHPQLQRPLV PRVLIHGLGP GGQPALNPLS NPIPGTPHPR bmy_17255T0/1-380 PHPQLQRPLV PRVLIHGLGP GGQPALNPLS NPIPGTPHPR BACU006375/1-380 PHPQLQRPLV PRVLIHGLGP GGQPALNPLS NPIPGTPHPR