KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:33:07 2014 Check: 00 .. Name: ENSBTAP00000007808/1-582 Len: 632 Check: 6687 Weight: 1.00 Name: ENSP00000218316/1-617 Len: 632 Check: 1792 Weight: 1.00 Name: ENSTTRP00000000191/1-591 Len: 632 Check: 6468 Weight: 1.00 Name: bmy_06465T0/1-585 Len: 632 Check: 3354 Weight: 1.00 Name: BACU007753/1-614 Len: 632 Check: 1234 Weight: 1.00 // 1 50 ENSBTAP00000007808/1-582 LTILSSNMGR TLAVPTPYGC IGCKLPQPDY PPALIVFMFC AMVITIVVDL ENSP00000218316/1-617 -------MGP TLAVPTPYGC IGCKLPQPEY PPALIIFMFC AMVITIVVDL ENSTTRP00000000191/1-591 -------MRP TLAVPSPYGC VGCKLPQPDY PPALIILMFC AMVITIVVEL bmy_06465T0/1-585 -------MGP TLAVPTPYGC IGCKLPQPDY PPALIIFMFC AMVITIVVDL BACU007753/1-614 -------MGP TLAVPTPYGC IGCKLPQPDY PPALIIFMFC AMVITIVVDL 51 100 ENSBTAP00000007808/1-582 IGNSMVILAV SKNKKLRNSG NVFVVSLSVA DILVAVYPYP LMLHAMAIGG ENSP00000218316/1-617 IGNSMVILAV TKNKKLRNSG NIFVVSLSVA DMLVAIYPYP LMLHAMSIGG ENSTTRP00000000191/1-591 IGNSMVILAG VK-QKLRDSG NIFVVSLSVA DMLVAVYPYP LMLHAMAVGG bmy_06465T0/1-585 IGNSMVILAV SKNKKLRNSG NIFVVSLSVA DMLVAVYPYP LMLHAMAIGG BACU007753/1-614 IGNSMVILAV SKNKKLRNSG NIFVVSLSVA DMLVAVYPYP LMLHAMAIGG 101 150 ENSBTAP00000007808/1-582 WDLSKLQCQM VGFITGLSVV GSIFNIMAIA INRYCYICHS LQYERIFSVR ENSP00000218316/1-617 WDLSQLQCQM VGFITGLSVV GSIFNIVAIA INRYCYICHS LQYERIFSVR ENSTTRP00000000191/1-591 WDMSQLQCQM VGFITGLSVV GSIFNIVAIA INRYCYICHS LQYERIFSVR bmy_06465T0/1-585 WDLSQLQCQM VGFITGLSVV GSIFNIVAIA INRYCYICHS LQYERIFSVR BACU007753/1-614 WDLSQLQCQM VGFITGLSVV GSIFNIVAIA INRYCYICHS LQYERIFSVR 151 200 ENSBTAP00000007808/1-582 NTCIYLAVTW IMTLLAVLPN MYIGTIEYDP RTYTCIFNYV NNPAFAVTIV ENSP00000218316/1-617 NTCIYLVITW IMTVLAVLPN MYIGTIEYDP RTYTCIFNYL NNPVFTVTIV ENSTTRP00000000191/1-591 NTCIYLVVTW IMTVLAVLPN MYIGTIEYDP RTYTCIFNYL NNSAFAVTIV bmy_06465T0/1-585 NTCIYLVVTW IMTVLAVLPN MYIGTIEYDP RTYTCIFNYL NNPAFAVTIV BACU007753/1-614 NTCIYLVVTW IMTVLAVLPN MYVGTIEYDP RTYTCIFNYL NNPAFAVTIV 201 250 ENSBTAP00000007808/1-582 CIHFVLPLLI VGFCYMKIWT KVLAARDPAG QNPNNQLAEV RNFLTMFVIF ENSP00000218316/1-617 CIHFVLPLLI VGFCYVRIWT KVLAARDPAG QNPDNQLAEV RNFLTMFVIF ENSTTRP00000000191/1-591 CIHFVLPLLI VGFCYVRIWT KVLAVRDQAG QNPDNQLAEV RNFLTMFVIF bmy_06465T0/1-585 CIHFVLPLLI VGFCYVRIWT KVLAAREPAG QNPDNQLAEV RNFLTMFVIF BACU007753/1-614 CIHFVLPLLI VGFCYVRIWT KVLAAREPAG QNPDNQLAEV RNFLTMFVIF 251 300 ENSBTAP00000007808/1-582 LLFAVCWCPI NALTVLVAVS PKEMADKIPN WVYLAAYFIA YFNSCLNAVI ENSP00000218316/1-617 LLFAVCWCPI NVLTVLVAVS PKEMAGKIPN WLYLAAYFIA YFNSCLNAVI ENSTTRP00000000191/1-591 LLFAGCWCPI NVLTVLVAVS PKEMAGKVPN WLYLASYFVA YFNSCLNAVI bmy_06465T0/1-585 LLFAVCWCPI NVLTVLVAVS PKEMAGKIPN WLYLAAYFVA YFNSCLNAVI BACU007753/1-614 LLFAVCWCPI NVLTVLVAVS PKEMAGKIPN WLYLAAYFVA YFNSCLNAVI 301 350 ENSBTAP00000007808/1-582 YGVLNENFRR EYWTIFHAMR HPVLFLSGLL TDVREMQEAQ ARARARAHAR ENSP00000218316/1-617 YGLLNENFRR EYWTIFHAMR HPIIFFSGLI SDIREMQEAR TLARARAHAR ENSTTRP00000000191/1-591 YGLLNENFRR EYFTIFHAMR HPIQFFSGLI TDVREMREAR AFARARARTR bmy_06465T0/1-585 YGLLNENFRR EYWTIFHAMR HPILFLSGLI TDVREMREAR AFARARARAR BACU007753/1-614 YGLLNENFRR EYWTIFHAMR HPILFLSGLI TDVREMREAR AFARARARAR 351 400 ENSBTAP00000007808/1-582 AQAREQ---- DRARACPAVE EIPMSVRNVP LPGYGAAGQH ECVSGHPKPA ENSP00000218316/1-617 DQAREQ---- DRAHACPAVE ETPMNVRNVP LPGDAAAGHP DRASGHPKP- ENSTTRP00000000191/1-591 DRAREQ---- ----ACTAVE EIPMSVRNVP LPGDAAAGQP ECASGHSRPA bmy_06465T0/1-585 DQARDQAREQ DHARACPAVE EVPMNVRNVP LPGDAAAGQP ERASGHPRPA BACU007753/1-614 DQAREQAREQ DHARACPAVE EMPMNVRNVP LPGDAAAGQP ERASGHPTPA 401 450 ENSBTAP00000007808/1-582 SGHSRSASAR RKS------- ---------- ----ASAHPK SASGQSRSAT ENSP00000218316/1-617 --HSRSSSAY RKSASTHHKS VFSHSKAASG HLKPVSGHSK PASGHPKSAT ENSTTRP00000000191/1-591 SGHSRSASAH RTSASVHHKS VFSHSRPASG HRKSASGHSR STSGHPKSAT bmy_06465T0/1-585 SGHSRSASAH RKSASGHHKS VFSHSKP--- ----ASGHSK SASGHPKSAT BACU007753/1-614 SGHSRSASAH RKSASGHHKS VFSHSKPASG HPKSASGHSK SASGHPKSAT 451 500 ENSBTAP00000007808/1-582 VYPKPASVHF -------KPS SVYFKADSVY FKPSSSHPKP VTG------- ENSP00000218316/1-617 VYPKPASVHF KADSVHFKGD SVHFKPDSVH FKPASSNPKP ITGHHVSAGS ENSTTRP00000000191/1-591 VYP------- -------KPA SVHFKADSVY FKPASSHPKP VTGHHIPAGS bmy_06465T0/1-585 VYP------- -------KPA SVRFKADSVH FKPASSHPKP VTGHHVPAGS BACU007753/1-614 VYPKPASVHF KAASVHFKPA SVHFKADSVH FKPASGHPKP VTGHHVPAGS 501 550 ENSBTAP00000007808/1-582 PSKTAISPAT SFPKPTTGYT QHATIHSEPT TPDYLEPITT SHSKPVIASH ENSP00000218316/1-617 HSKSAFSAAT SHPKPTTGHI KPATSHAEPT TADYPKPATT SHPKPTAADN ENSTTRP00000000191/1-591 HSKATFSPAT SYPKPTTGHT KPATTHPEP- -ADYPEPVAT SHLEPAIAGQ bmy_06465T0/1-585 HSKATFSPAT SCPKPTTGHT KPATTQPEP- -ADCPEPVAT SHLEPAIAGQ BACU007753/1-614 HSKTTFSPAT SCPKPTTGHT KPATPHPEL- -AGYPESVAT SHLQPAIAGQ 551 600 ENSBTAP00000007808/1-582 SELAAS---- ----CHLECD IFDLSDPTSS PASDSSDSAA SLLYPTAAAA ENSP00000218316/1-617 PELSASHCPE IPAIAHPVSD DSDLPESASS PAAGPTKPAA SQLESDTIAD ENSTTRP00000000191/1-591 PEPTAA---- ----GHLECD ITDLPEPASS PATESPKPVA SPLEP-AAAA bmy_06465T0/1-585 PEPTAA---- ----GHLECD ITDLPEPASN PATESPKP-- -------AAA BACU007753/1-614 PEPTAA---- ----GHLECD ITGLPEPASN PATESPKPVA SPLKP-AAAA 601 650 ENSBTAP00000007808/1-582 ATVDPPVVTT ---DYREVVL SDVDADSDEM AV ENSP00000218316/1-617 LP-DPTVVTT STNDYHDVVV IDVEDDPDEM AV ENSTTRP00000000191/1-591 APVDPFVVTI ATDDYQEVVV IDVEADSDEV AV bmy_06465T0/1-585 APVDPIVVTI ASNDYHEVMV IDVEADSDEM AV BACU007753/1-614 APVDPIVVTI ATNDYHEVMV IDVEADSDEM AV