KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:33:08 2014 Check: 00 .. Name: BACU002162/1-230 Len: 516 Check: 8898 Weight: 1.00 Name: ENSP00000361669/1-406 Len: 516 Check: 1542 Weight: 1.00 Name: bmy_11198T0/1-367 Len: 516 Check: 7836 Weight: 1.00 Name: ENSBTAP00000007812/1-279 Len: 516 Check: 6419 Weight: 1.00 // 1 50 BACU002162/1-230 ---------- ---------- ---------- ---------- ---------- ENSP00000361669/1-406 ---------- ---------- ---------- ---------- ---------- bmy_11198T0/1-367 MLNWILSKWK PNMHFLNMEK NCKPSWEKNP RKQHTPLYKA RKPERRRQKR ENSBTAP00000007812/1-279 ---------- ---------- ---------- ---------- ---------- 51 100 BACU002162/1-230 ---------- ---------- ---------- ---------- ---------- ENSP00000361669/1-406 ---------- ---------- -------MES LRGYTHSDIG YRSLAVGEDI bmy_11198T0/1-367 SRRQKSSPRG SRHGLSAESA EAQGFIDSNQ GMACSHHDTG YSSLGVDEDE ENSBTAP00000007812/1-279 ---------- ---------- ---------- -MDSSHFDIG FHNLGIGED- 101 150 BACU002162/1-230 ---------- ---------- ---------- ---------- ---------- ENSP00000361669/1-406 EEVNDEKLTV TSLMARGGED EENTRSKPEY G----TEAEN NVGTEGSV-- bmy_11198T0/1-367 KELHNAEPTL TSETVTGGEN EA-TLSEPEL GEAAAAAAAD YFNAVGSS-- ENSBTAP00000007812/1-279 -ELHDVEPTL ISEVLNGVED E--TRSSPEP GEAAAAAAAN YFGEADSNLL 151 200 BACU002162/1-230 ---------- ---------- ---------- ---------- ---------- ENSP00000361669/1-406 ---------- ---------- ---PSDDQDR EGGGGHEPEQ QQEEPPLTKP bmy_11198T0/1-367 ---------- ---------- ---PSDENRE GGGGGLEPPQ QQEEL----- ENSBTAP00000007812/1-279 DDENREGNEN RAGDENRAGD ENRAGDENRE GNGGDIEPPP QQEEP----- 201 250 BACU002162/1-230 ---------- ---------- ----MGPTRS SGP------- -PKRQRQART ENSP00000361669/1-406 EQQQEEPPLL ELKQEQEEPP QTTVEGPQPA EGPQTAEGPQ PPERKRRRRT bmy_11198T0/1-367 ---------- ---------- -----APPAA EGPQIV---- -PGKQRRCRT ENSBTAP00000007812/1-279 ---------- ---------- -----GPQAV QGPQNA---- -AVKPRRCRT 251 300 BACU002162/1-230 VYTKEQLDVL KEYFQKNKYP GYQDRLRLAA RLSLEEHKLQ MWFKNRRAQR ENSP00000361669/1-406 AFTQFQLQEL ENFFDESQYP DVVARERLAA RLNLTEDRVQ VWFQNRRAKW bmy_11198T0/1-367 VFTRLQRREL EKAFQRTRYP DVFAREAIAG RLNLPETRVQ VWFQNRRAKW ENSBTAP00000007812/1-279 VFTQLQLLEL ERVFRRVQYP DVFAREDIAR RLNLAERRVQ VWFQNRRAKW 301 350 BACU002162/1-230 SRLERLAKGR SHRARDAPTD PGAPGAPGTA PAPVLAAAAA AAAGPAFPDG ENSP00000361669/1-406 KRNQRVLMLR NTATADLAHP LDMFLGGAYY AAPALDPALC VHLVPQLPRP bmy_11198T0/1-367 RRQQRALMFR NVTPVALGPH MGITFDGPYQ AVPVLEPPW- -RYVPAVPQP ENSBTAP00000007812/1-279 RRYQRALMFR NVHPAALGHP MGVFFNGPYH ---VFQPGW- -RYVPAVPR- 351 400 BACU002162/1-230 PGFRSPP--P RSP------- ---------- --------AG MLPAP-EPSV ENSP00000361669/1-406 PVLPVPPMPP RPPMVPMPPR PPIAPMPPMA PVPPGSRMAP VPPGPRMAPV bmy_11198T0/1-367 VMPLAPPMLP RPP------- ---------- ---------P LPPGP----- ENSBTAP00000007812/1-279 ---------- --P------- ---------- ---------G LPPGV----- 401 450 BACU002162/1-230 SSQGQAMWAP AQGAQAPVQA ASALAPAPV- ---------- ---------- ENSP00000361669/1-406 PPWPPMAPVP PWPPMAPVPT GPPMAPVPPG PPMARVPPGP PMARVPPGPP bmy_11198T0/1-367 ---------- ---------- -PPLRPGPP- ---------- ---------- ENSBTAP00000007812/1-279 ---------- ---------- ---------- ---------- ---------- 451 500 BACU002162/1-230 -WPLDPYAP- -NFGPDPF-- PIPDFTVVFS PQDPSPGSPS PSMSGSRKID ENSP00000361669/1-406 MAPLPPGPPM APLPPGPPMA PLP-PGPPMA PLPPRSHVPH TGLAPVHITW bmy_11198T0/1-367 --PLPPGPP- -PLPPGPP-- PLP-PGMPLP PPPP---VPP FAVGPVGMAW ENSBTAP00000007812/1-279 --PPPPVLP- APLPPR---- --P-WRMPFP QPVP---VPH YAMAPVGLAW 501 550 BACU002162/1-230 ECVDENDLDP KRLLSL ENSP00000361669/1-406 APVINSYYAC PFF--- bmy_11198T0/1-367 GPVINGHLMG PIF--- ENSBTAP00000007812/1-279 API--GHFVG PRF---