KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:33:09 2014 Check: 00 .. Name: ENSP00000252655/1-560 Len: 611 Check: 3030 Weight: 1.00 Name: ENSTTRP00000010762/1-550 Len: 611 Check: 2833 Weight: 1.00 Name: ENSBTAP00000007814/1-606 Len: 611 Check: 4007 Weight: 1.00 Name: bmy_13767T0/1-376 Len: 611 Check: 3981 Weight: 1.00 Name: BACU011756/1-550 Len: 611 Check: 3256 Weight: 1.00 // 1 50 ENSP00000252655/1-560 ---------- ---------- ---------- ---------- ----MTVKPA ENSTTRP00000010762/1-550 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000007814/1-606 MARSEARRQA REKRPRAVPE ERALRERRQP RPRREPLESG AGDHRRPPQA bmy_13767T0/1-376 ---------- ---------- ---------- ---------- ---------- BACU011756/1-550 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000252655/1-560 KAASLARNLA KRRRTYLGGA AGRSQEPEVP CAAV-LPGKP GDRNCPEFPP ENSTTRP00000010762/1-550 --GSATPASF TRRCIYKVDL GGRSQ-PEMP RRTG-LPPKP SSRNFPEVPL ENSBTAP00000007814/1-606 SAGAAGHASF MRRLVDQEDA GGQSQEPEVL GRTGNLPRKP ASRNSPEAPP bmy_13767T0/1-376 ---------- ---------- ---------- ---------- ---------- BACU011756/1-550 -----MSASF TRRRIYKEGL GGRSQEPEVP RRTG-LPPKP GSRNFSEVPL 101 150 ENSP00000252655/1-560 PDRTLGCWAT DAAPAAGLCG AGSEPSIAPT SCAGNLPSRP PPLLSPLLAS ENSTTRP00000010762/1-550 PAGTLGCWAT GAGGAGGLSA APSKPSVAPT SCPGNFPSRP LPFLPPLLAS ENSBTAP00000007814/1-606 LDGTLGCWAT GAGAAGGFGG AQNRACVAPT SCPGNLPARP LPFLPPLLAS bmy_13767T0/1-376 ---------- ---------- ---------- ---------- ---------- BACU011756/1-550 PAGTLGCWAT GAGGAGGLSA APSKPSVAPT SCPGNFPSRS LPFLPPLLAS 151 200 ENSP00000252655/1-560 RNPCPWHYLH LSGSHNTLAP TCFKAKLHRK RGSQPPDMAS ALTDRTSRAP ENSTTRP00000010762/1-550 RNPCPWHYVH L-GSHDTFCD TCFEPKLHRK RSGLTLXXXX XXXXXXXXXX ENSBTAP00000007814/1-606 RNPCPWHYVH LSGSHDTLVP TCFEAKLHQK GSGPTPSATS TLAERASPAM bmy_13767T0/1-376 ---------- ---------- ---------- ---------- ---------- BACU011756/1-550 RNPCPWHYVH LSGSYDTFVP TCFEAKLHRK RSGLTLGLAC TLTDRASPAM 201 250 ENSP00000252655/1-560 STYTYTSRPR ALPCQRSRYR DSLTQPDEEP MHYGNIMYDR RVIRGNTYAL ENSTTRP00000010762/1-550 XXXXXXXXXX XXXXXXXXXX XXXXXXAEEP MHYGNIMYDR RVIRGNTYAL ENSBTAP00000007814/1-606 ATYTYTSRPR ALPCQRRRYR DDLMQQPEEP VHYGNIMYDR RVIRGNTYAL bmy_13767T0/1-376 ---------- ---------- ---------- MRYGNIMYDR RVIRGNTYAL BACU011756/1-550 ATYTYTSQPR ALPCQRRRYR DDQMQPAEEP MRYGNIMYDR RVIRGNTYAL 251 300 ENSP00000252655/1-560 QTGPLLGRPD SLELQRQREA RKRALARKQA QEQLRPQTPE PVEGRKHVDV ENSTTRP00000010762/1-550 QTVPLPEQPD PAEIQRQQQA KRRALAKKRA QEELRPRTPE PVEGRKHVDV ENSBTAP00000007814/1-606 QSVPLPGQPD PVEIQRQQQA RRRAFARKQA QEQLRPRTPE PVEGRKHVDV bmy_13767T0/1-376 QTVPLPGQPD PAEIQRQQQA KRRALAKKRA QEQLRPRTPE PVEGRKHVDV BACU011756/1-550 QTVPLPGQPD LAEIQRQQQA KRRALAKKRA QEQLRPRTPE PMEGRKHVDV 301 350 ENSP00000252655/1-560 QTELYLEEIA DRIIEVDMEC QTDAFLDRPP TPLFIPAKTG KDVATQILEG ENSTTRP00000010762/1-550 QTELYLEEIA DRIIXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000007814/1-606 QTELYLEEIA DRIVEVDMEC QTDAFLDKPP TPLFIPAKTG KDVATEILEG bmy_13767T0/1-376 QTELYLEEIA DRIIEVDVEC QTDAFLDKPP TLLFIPAKTG KDVATQILEG BACU011756/1-550 QTELYLEEIA DRIIEVDMEC QTDAFLDKPP TPLFIPAKTG KDMATQILEG 351 400 ENSP00000252655/1-560 ELFDFDLEVK PVLEVLVGKT IEQSLLEVME EEELANLRAS QREYEELRNS ENSTTRP00000010762/1-550 XLFDFDLEVK PMLEVLVGKT IEQSLLEVME EEELANLQAR QHVHEELRNV ENSBTAP00000007814/1-606 ELFDFDLEVK PMLEVLVGKT IEQSLLEVME EEELANLRAS QYAYEELRNI bmy_13767T0/1-376 ELFDFDLEVK PMLEVLVGKT IEQSLLEVME EEELANLRAS QCAHEELRNV BACU011756/1-550 ELFDFDLEVK PMLEVLVGKT IEQSLLEVME EEELANLRAS QRAHEELRNV 401 450 ENSP00000252655/1-560 ERAEVQRLEE QERRHREEKE RRKKQQWEIM HKHNETSQKI AARAFAQRYL ENSTTRP00000010762/1-550 ELAEVQRLEE RERRHREEKE RRKQQQWQVV HKHKETAQKI AARAFAQRYL ENSBTAP00000007814/1-606 ELAEVQRLEE QERRHREEKE RRKQQQWQVV HKHNETSQKI AARAFAQRYL bmy_13767T0/1-376 ELAEVQRLEA RERRHREEKE RRKQQQWQVV HKHNETAQKI AAQAFAQRYL BACU011756/1-550 ELAEVQRLEE RERRHREEKE RRKQQQWQVV HKHNETAQKI AAQAFAQRYL 451 500 ENSP00000252655/1-560 ADLLPSVFGS LRDSGYFYDP IERDIEIGFL PWLMNEVEKT MEYSMVGRTV ENSTTRP00000010762/1-550 ADLLPSVFSS LRDAGYFYDP VERDIEIGFL PWLMNEVDKA MERSMVGRTV ENSBTAP00000007814/1-606 ADLLPSVFDS LRDGGYFYDP VERDIEIGFL PWLMNEVDKT MESSMVGRTV bmy_13767T0/1-376 ADLLPSVFSS LRDGGYFYDP VERDIEIGFL PWLMNEVDKT TECSMVGRTV BACU011756/1-550 ADLLPSVFSS LRDGGYFYDP VERDIEIGFL PWLMNEVDKT MECSTVGRTV 501 550 ENSP00000252655/1-560 LDMLIREVVE KRLCMYEHGE DTHQSPEPED EPGGPGAMTE SLEASEFLEQ ENSTTRP00000010762/1-550 VDMLIREVVG KRLSLYERKE DRHSSLKPED GLSGPGGMRD PPVGYEFQDH ENSBTAP00000007814/1-606 LDMLIREVVE RRLNLYEQKE GRHASVRPEN GLGGPGGTRE PLVGFESQDQ bmy_13767T0/1-376 VDMLIREVVE KRLSLYERKE DKHSSLKPED GLSGPGGMRD PLVGYESQDH BACU011756/1-550 ADMLIREVVE KRLSLYERKE DKHSSLKPED GLSGPGGMRD PLVGYESQDH 551 600 ENSP00000252655/1-560 SMSQTRELLL DGGYLQRTTY DRR-----SS QERKFMEERE LLGQDEETAM ENSTTRP00000010762/1-550 GASQAQRPLP DTDSLQRTPY DAMYMERVSS QDRKLMEE-- ---EDEQT-M ENSBTAP00000007814/1-606 GASQAQRPLP DRDSLQRTPY DARYAERVSS QERRLAEE-- ---NDELTEM bmy_13767T0/1-376 GASQAQRPLP DRDSLQRTPY DARYMERVSS QDRKLMEE-- ---EDEQTEM BACU011756/1-550 SASQAQRPLP DRDSPQRTPY DARYMERVSS QDRKLMEE-- ---EVEQTEM 601 650 ENSP00000252655/1-560 RKSLGEEELS - ENSTTRP00000010762/1-550 RKSFRSEELL Q ENSBTAP00000007814/1-606 RKSSKREELS Q bmy_13767T0/1-376 RKSFRSKEPL Q BACU011756/1-550 RKSFRSEEPL Q