KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:33:17 2014 Check: 00 .. Name: bmy_01636T0/1-327 Len: 391 Check: 2427 Weight: 1.00 Name: BACU003359/1-321 Len: 391 Check: 2413 Weight: 1.00 Name: ENSP00000216037/1-261 Len: 391 Check: 5663 Weight: 1.00 Name: ENSBTAP00000007835/1-261 Len: 391 Check: 8005 Weight: 1.00 // 1 50 bmy_01636T0/1-327 ---------- ---------- ---------- ---------- MTQCGMSL-- BACU003359/1-321 ---------- ---------- ---------- --------ML PGQRGASPEA ENSP00000216037/1-261 MVVVAAAPNP ADGTPKVLLL SGQPASAAGA PAGQALPLMV PAQRGASPEA ENSBTAP00000007835/1-261 MVVVAPAQSP AAGAPKVLLL SGQPAATGGA PAGRALPVMV PGQQGASPEG 51 100 bmy_01636T0/1-327 ---------- ---------- --SVLRKLKN RVAAQTARDR KKARMSELEQ BACU003359/1-321 ASGGPPQARK RQRLTHLSPE EKALRRKLKN RVAAQTARDR KKARMSELEQ ENSP00000216037/1-261 ASGGLPQARK RQRLTHLSPE EKALRRKLKN RVAAQTARDR KKARMSELEQ ENSBTAP00000007835/1-261 ASGVPPQARK RQRLTHLSPE EKALRRKLKN RVAAQTARDR KKARMSELEQ 101 150 bmy_01636T0/1-327 QVVDLEEENQ KLLLENQLLR EKTHGLVVEN QELRQRLGMD ALVTEEEAET BACU003359/1-321 QVVDLEEENQ KLLLENQLLR EKTHGLVVEN QELRQRLGMD ALVTEEEAET ENSP00000216037/1-261 QVVDLEEENQ KLLLENQLLR EKTHGLVVEN QELRQRLGMD ALVAEEEAEA ENSBTAP00000007835/1-261 QVVDLEEENQ KLLLENQLLR EKTHGLVVEN QELRQRLGMD ALVTEEEAET 151 200 bmy_01636T0/1-327 KGNGARPVAG SAESAALRLR APLQQVQAQL SPLQNISPWI LTVLTLQTLR BACU003359/1-321 KGNGARPVAG SAESAALRLR APLQ------ ------SDIL LGI------- ENSP00000216037/1-261 KGNEVRPVAG SAESAALRLR APLQQVQAQL SPLQNISPWI LAVLTLQ--- ENSBTAP00000007835/1-261 KGNGAGLVAG SAESAALRLR APLQQVQAQL SPLQNISPWT LMALTLQ--- 201 250 bmy_01636T0/1-327 QMRAEKSDIL LGILFNLDPV MFFRCPSPES TSLEQLPEVD PEGPSSLPTP BACU003359/1-321 ---------- ---LFNLDPV MFFRCPSPES TSLEQLPEVE PEGPSSLPTP ENSP00000216037/1-261 ---------- ---IQSLISC WAFWTTWTQS CSSNALPQ-- -----SLPAW ENSBTAP00000007835/1-261 ---------- ---TLSLTSC WAFCSTWTQS CSSDVLPQ-- -----SLPAW 251 300 bmy_01636T0/1-327 PSPSLGTSSA KLEAINELIR FDHVYTKPLV LEIPSETESQ ANVVVKIEEA BACU003359/1-321 PSPSLGTSSA KLEAINELIR FDHVYTKPLV LEIPSETESQ ANVVVKIEEA ENSP00000216037/1-261 RSSQRSTQKD PVP------- ----YQPPFL ---------- ---------- ENSBTAP00000007835/1-261 SSSQKWTQKD PVP------- ----YRPPLL ---------- ---------- 301 350 bmy_01636T0/1-327 PSSPSEKDHP EFTVSVKEEL VDDDFIPELG ISDLLSTSHC LKPSSCLLDA BACU003359/1-321 PSSPSEKDHP EFTVSVKEEL VEDDFIPELG ISDLLSTSHC LKPSSCLLDA ENSP00000216037/1-261 --CQWGRHQP ---------- ---------- ---------- ---------- ENSBTAP00000007835/1-261 --HPWGRHQP ---------- ---------- ---------- ---------- 351 400 bmy_01636T0/1-327 YSDCSYEGSP SPLSDMSSLL GVDHSWEDTF ASELFPQLIS V BACU003359/1-321 YSDCSYEGSP SPLSDMSSLL GVDHSWEDTF ASELFPQLIS V ENSP00000216037/1-261 ---------- ---------- ----SWKPLM N--------- - ENSBTAP00000007835/1-261 ---------- ---------- ----SWKPLM N--------- -