KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:33:17 2014 Check: 00 .. Name: ENSP00000254521/1-341 Len: 341 Check: 9114 Weight: 1.00 Name: ENSBTAP00000007841/1-334 Len: 341 Check: 7783 Weight: 1.00 Name: ENSTTRP00000010480/1-330 Len: 341 Check: 892 Weight: 1.00 Name: bmy_21118T0/1-276 Len: 341 Check: 2084 Weight: 1.00 Name: BACU014427/1-297 Len: 341 Check: 9836 Weight: 1.00 // 1 50 ENSP00000254521/1-341 MRKVVLITGA SSGIGLALCK RLLAEDDELH LCLACRNMSK AEAVCAALLA ENSBTAP00000007841/1-334 MRKVVLITGA SSGVGLALCR RLLEEDDALH LCLACRNMSK AEAVRTSLLA ENSTTRP00000010480/1-330 MRKVVLITGA SSGVGLALCR RLLEEDHELH LCLACRNMSK AEAVRTALLA bmy_21118T0/1-276 ---------- ---------- ---------- -------MSK AEAVRTALLA BACU014427/1-297 ---------- ---------- ---------- -------MSK AEAVRTALLA 51 100 ENSP00000254521/1-341 SHPTAEVTIV QVDVSNLQSV FRASKELKQR FQRLDCIYLN AGIMPNPQLN ENSBTAP00000007841/1-334 SHPAAEVSIV QVDVSSLPSV FQATKELKQR FQRLDYVYLN AGIMPNPQLN ENSTTRP00000010480/1-330 SHPTAEVSTV QVDVSSLLSV FQASKELKQR FQRFDYVYLN AGIMPNPQLN bmy_21118T0/1-276 SHPTAEVSTV QVDVSSLPSV FQASKELKQR FQRFDYVYLN AGIMPNPQLN BACU014427/1-297 SHPTAEVSTV QVDVSSLPSV FQASKELKQR FQRFDYVYLN AGIMPNPQLN 101 150 ENSP00000254521/1-341 IKALFFGLFS RKVIHMFSTA EGLLTQGDKI TADGLQEVFE TNVFGHFILI ENSBTAP00000007841/1-334 IKALFRGLFS RKVIHMFSTA EGLLTQNDKI TPDGLQEVFE TNVFGHFILI ENSTTRP00000010480/1-330 IKALFCGLFS RKAIHIFSTA EGVLTQSEKI TADGLQEVFA TNVFGHFILI bmy_21118T0/1-276 IKALFCGLFS RKAIHIFSTA EGVLTQSEKI TADGLQEVFE TNVFGHFIL- BACU014427/1-297 IKALFCGLFS RKAIHIFSTA EGVLTQSEKI TADGLQEVFE TNVFGHFILI 151 200 ENSP00000254521/1-341 RELEPLLCHS DNPSQLIWTS SRSARKSNFS LEDFQHSKGK EPYSSSKYAT ENSBTAP00000007841/1-334 QELESLLCHS ESPSQLIWTS SRNAKKSNFS FEDVQHSKGQ EPYSSSKYAI ENSTTRP00000010480/1-330 RELESLLCHS DSPSQLIWTS SRNAVKSNFN LEDIQHSKGQ EPYSSSKYAI bmy_21118T0/1-276 ---------- -----LIWTS SRNAVKSNFS LEDIQHSKGQ EPYSSSKYAI BACU014427/1-297 RELESLLCHS DSPSQLIWTS SRNAVKSNFS LEDIQHSKGQ EPYSSSKYAI 201 250 ENSP00000254521/1-341 DLLSVALNRN FNQQGLYSNV ACPGTALTNL TYGILPPFIW TLLMPAILLL ENSBTAP00000007841/1-334 DLLSVALNRH FNHQGLYSSV VCPGTMLTNL TYGILPPFVW MLIMPIIWLL ENSTTRP00000010480/1-330 DLLSVALNRN FNQRGLYSSV ACPGTVLTNL TYGIMPPFVW TLIMPIIWLF bmy_21118T0/1-276 DLLSVALNRN FNQRGLYSSV ACPGTVLTNL TYGIMPPFVW TLIMPIIWLL BACU014427/1-297 DLLSVALNRN FNQRGLYSSV ACPGTVLTNL TYGIMPPFVW TLIMPIIWLL 251 300 ENSP00000254521/1-341 RFFANAFTLT PYNGTEALVW LFHQKPESLN PLIKYLSATT GFGRNYIMTQ ENSBTAP00000007841/1-334 RFFANAFTLT PHNGTEALVW LFHQKPESLN PLVKYLSATT GFGSNYVTSK ENSTTRP00000010480/1-330 RFFANAFTLT PYNGTEALVW LFHQKPESLD PLVKYLSATT GFGSNYVTSK bmy_21118T0/1-276 RFFANAFTLT PYNGTEVLVW LFHQKPESLN PLVKYLSATT GFGSNYI--- BACU014427/1-297 RFFANAFTLT PYNGTEVLVW LFHQKPESLN PLVKYLSATT GFGSNYVTSK 301 350 ENSP00000254521/1-341 KMDLDEDTAE KFYQKLLELE KHIRVTIQKT DNQARLSGSC L ENSBTAP00000007841/1-334 KMDLDEDTAE KFYQKLLKLE KEIRVTIQKT NNQN------ - ENSTTRP00000010480/1-330 KIDLDEDTAE KFYQNLLELE RDIRVTIQKS ---------- - bmy_21118T0/1-276 --DLDEDTAE KFYQNLLELE KDIRVTIQKT KNQS------ - BACU014427/1-297 KIDLDEDTAE KFYHNLLELE KDIRVTIQKT KNQS------ -