KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:33:19 2014 Check: 00 .. Name: bmy_17134T0/1-160 Len: 224 Check: 1052 Weight: 1.00 Name: ENSP00000269503/1-224 Len: 224 Check: 2627 Weight: 1.00 Name: ENSTTRP00000014620/1-224 Len: 224 Check: 2665 Weight: 1.00 Name: ENSBTAP00000007856/1-224 Len: 224 Check: 2227 Weight: 1.00 Name: BACU018330/1-188 Len: 224 Check: 2431 Weight: 1.00 // 1 50 bmy_17134T0/1-160 ---------- ---------- --MHCERTEL CFGPRFTF-- ---------- ENSP00000269503/1-224 MQAPGRGPLG LRLMMPGRRG ALREPGGCGS CLGVALALLL LLLPACCPVR ENSTTRP00000014620/1-224 MPAPGRGPRG PPLTMPGRRR ALREPAACGS SLGAALALLL LLLPAGCPVR ENSBTAP00000007856/1-224 MLAPGRGPRG PPLTMPGRRG ALREPAGCGS GLGAALALLL LLLPAGCPVR BACU018330/1-188 ---------- ---------- ---------- ------ALLL LLLPAGCPVR 51 100 bmy_17134T0/1-160 ---------- ---------T SPESYGPLNR ---LSYSVST ELIVFPCFLS ENSP00000269503/1-224 AQNDTEPIVL EGKCLVVCDS SPSADGAVTS SLGISVRSGS AKVAFSATRS ENSTTRP00000014620/1-224 AQNDTEPIVL EGKCLVVCDS SPSADGAVTS SLGISVRSGS AKVAFSATRS ENSBTAP00000007856/1-224 AQNDTEPIVL EGKCLVVCDS SPSADGAVTS SLGISVRSGS AKVAFSATRS BACU018330/1-188 AQNDTEPIVL EGKCLVVCDS SPSADGAVTS SLGISVRSGS AKVAFSATRS 101 150 bmy_17134T0/1-160 ALPTAA---- -TICIH---V LVNIGNHFDL ASSIFVAPRK GIYSFSFHVV ENSP00000269503/1-224 TNHEPSEMSN RTMTIYFDQV LVNIGNHFDL ASSIFVAPRK GIYSFSFHVV ENSTTRP00000014620/1-224 TNHEPSEMSN RTMTIYFDQV LVNIGNHFDL ASSIFVAPRK GIYSFSFHVV ENSBTAP00000007856/1-224 TNHEPSEMSN RTMTIYFDQV LVNIGNHFDL ASSIFVAPRK GIYSFSFHVV BACU018330/1-188 TNHEPSEMSN RTMTIYFDQV LVNVGNHFDL ASSIFVAPRK GIYSFSFHVV 151 200 bmy_17134T0/1-160 KVYNRQTIQV SLMQNGYPVI SAFAGDQDVT REAASNGVLL LMEREDKVHL ENSP00000269503/1-224 KVYNRQTIQV SLMQNGYPVI SAFAGDQDVT REAASNGVLL LMEREDKVHL ENSTTRP00000014620/1-224 KVYNRQTIQV SLMQNGYPVI SAFAGDQDVT REAASNGVLL LMEREDKVHL ENSBTAP00000007856/1-224 KVYNRQTIQV SLMQNGYPVI SAFAGDQDVT REAASNGVLL LMEREDKVHL BACU018330/1-188 KVYNRQTIQV SLMQNGYPVI SAFAGDQDVT REAASNGVLL LMEREDKVHL 201 250 bmy_17134T0/1-160 KLERGNLMGG WKYSTFSGFL VFPL ENSP00000269503/1-224 KLERGNLMGG WKYSTFSGFL VFPL ENSTTRP00000014620/1-224 KLERGNLMGG WKYSTFSGFL VFPL ENSBTAP00000007856/1-224 KLERGNLMGG WKYSTFSGFL VFPL BACU018330/1-188 KLERGNLMGG WKYSTFSGFL VFPL