KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:33:19 2014 Check: 00 .. Name: ENSP00000310803/1-215 Len: 225 Check: 8887 Weight: 1.00 Name: ENSBTAP00000007857/1-220 Len: 225 Check: 2761 Weight: 1.00 Name: bmy_10446T0/1-148 Len: 225 Check: 2689 Weight: 1.00 Name: ENSTTRP00000011011/1-218 Len: 225 Check: 7718 Weight: 1.00 // 1 50 ENSP00000310803/1-215 -------MAD LHRQLQEYLA QGKAGGPAAA EPLLAAEKAE EP--GDRPAE ENSBTAP00000007857/1-220 SRKRPSNMAD LNRQLQEYLA QGKAGGPAAT EPLLAAGEAK ESAAGAR--- bmy_10446T0/1-148 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000011011/1-218 -------MAD LHRQLQEYLA QGKAGGPAAA EPLLDAGEAE EPTAGAGPAG 51 100 ENSP00000310803/1-215 EWLGRAGLRW TWARSPAES- AAAGLTCLPS VTRGQRLAAG GGCLLLAALC ENSBTAP00000007857/1-220 AWFSRVGLRW TWTQSPAEP- -AAGQTCLPS VTRTQRLAAS GVCLLLAALC bmy_10446T0/1-148 ---------- ---------- -------MPS VTRFQRLAAS GVCLLLAALC ENSTTRP00000011011/1-218 AWLGRAGLHW TWARNSAEPT TAAGPTCMPS VTRAQRLAAS GVCLLLAALC 101 150 ENSP00000310803/1-215 FGLAALYAPV LLLRARKFAL LWSLGSALAL AGSALLRGGA ACGRLLRCEE ENSBTAP00000007857/1-220 FGLAALYAPV LLLRARKFAL LWSLGSALAL AGGTLLRGGA ACGRLLRGEE bmy_10446T0/1-148 FGLAALYAPV LLLRARKFAL LWSLGSALAL AGGSLLRGGA ACGRLLRGEE ENSTTRP00000011011/1-218 FGLAALYAPV LLLRARKFAL LWSLGSVLAL AGGTLLRGGA ACGRLLRGEE 151 200 ENSP00000310803/1-215 APSRPALLYM AALGATLFAA LGLRSTLLTV LGAGAQVAAL LAALVGLLPW ENSBTAP00000007857/1-220 APSRPALLYV FALGVTLYAA LCLRSTLLTA LGACAQVAAL LAALLGVLPR bmy_10446T0/1-148 APSRPALLYV AALGATLYAA LGLRSTLLTA LGACAQVAAL LAVLLGLLPR ENSTTRP00000011011/1-218 APSRPALLYV AALGATLYAA LGLRSTLLTA LGACAQVAAL LAVLLGLLPR 201 250 ENSP00000310803/1-215 GGGTALRLAL GRLGRGAGLA KVLPV ENSBTAP00000007857/1-220 GAGTALRITL GRLGPGAALA KALPV bmy_10446T0/1-148 GAGTALRMTL GRLGPGATLA KALPV ENSTTRP00000011011/1-218 GAGTALRMAL RRLGPGATLT KALPV