KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:33:21 2014 Check: 00 .. Name: BACU019126/1-501 Len: 553 Check: 4199 Weight: 1.00 Name: ENSBTAP00000007860/1-519 Len: 553 Check: 2134 Weight: 1.00 Name: bmy_13840T0/1-553 Len: 553 Check: 4954 Weight: 1.00 Name: ENSTTRP00000005840/1-513 Len: 553 Check: 5948 Weight: 1.00 // 1 50 BACU019126/1-501 ---------- ---------- ---------- ---------L TAAAGSPVRR ENSBTAP00000007860/1-519 ---------- ---------- ---------- ----MFLLPL PAAARVAVRH bmy_13840T0/1-553 PLFPAPESWA ARRALALLAP RARWRAVRGG RAEKMFLLPL PAPARLAVRH ENSTTRP00000005840/1-513 ---------- ---------- ---------- ----MFLLPL PAAARLAVRH 51 100 BACU019126/1-501 LSGKRSWGPG PGAADKTKGL VLGKCGKEKE GDVPQLTSAG ENFNKLVSGK ENSBTAP00000007860/1-519 LSVKRLWAPG PAAADMTKGL VLGIYSKEKE EDEPQFTSAG ENFNKLVSGK bmy_13840T0/1-553 LSVKYFWGPG PAAADMTKGL VLGIYSKEKE DDVPQFTSAG ENFNKLVSGK ENSTTRP00000005840/1-513 LSVKHFWGPG PAAADMTKGL VLGVYSKEKE DDVPQFTSAG ENFNKLVSGK 101 150 BACU019126/1-501 LREILNVSGP PLKAGKTQTF YGLREDFPHV VVVGLGKTTA GVDEQENWHE ENSBTAP00000007860/1-519 LREILNISGP PLKAGKTRTF YGLHEDFPSV VVVGLGKKTA GIDEQENWHE bmy_13840T0/1-553 LREILNISGP PLKAGKTRTF YGLHEDFSSV VVVGLGQRTA GVDEQENWHG ENSTTRP00000005840/1-513 LE-----SGP PLKAGKTRTF YGLHEDFPSV VVVGLGKRTA GVDEQENWHG 151 200 BACU019126/1-501 GKENIRAAVA AGCRQVQDPE IPSVEVDPCG DAH--AHGVV LGLYEYDDLK ENSBTAP00000007860/1-519 GKENIRAAVA AGCRQIQDLE IPSVEVDPCG DAQAAAEGAV LGLYEYDDLK bmy_13840T0/1-553 GKENIRAAAA AGCRQMQDLE IPSVEVDPCG DAQAAAEGAV LGLYEYDDLK ENSTTRP00000005840/1-513 GKENIRAAAA AGCRQFQDLE ISSVEVDPCG DAQAAAEGAM LGLYEYDDLK 201 250 BACU019126/1-501 QKKKVAVSVK PHGSGDQEAW QRGVLFASGQ NLACHFMETP ANEMTPTRFS ENSBTAP00000007860/1-519 QKRKVVVSAK LHGSEDQEAW QRGVLFASGQ NLARRLMETP ANEMTPTKFA bmy_13840T0/1-553 QKKKVAVSVK LHGSGDQEAW QRGVLFASGQ NLARHLMETP ANEMTPTRFA ENSTTRP00000005840/1-513 QKKKVAVSVK LHGSGDQEAW QRGVLFASGQ NLARHLMETP ANEMTPTKFA 251 300 BACU019126/1-501 GITEKNLKSA SSKTDVHIRP KPWIEEQEMG SFLSVAKGSE EPPVFLEIHY ENSBTAP00000007860/1-519 EIVEENLKSA SIKTDVFIRP KSWIEEQEMG SFLSVAKGSE EPPVFLEIHY bmy_13840T0/1-553 EIIEKNLXSA SSKTDVHIRP KPWIEEQEMG SFLSVAKGSE EPPVFLEIHY ENSTTRP00000005840/1-513 EIIEKNLRSA SSKTEVHIRP KPWIEEQEMG SFLSVAKGSE EPPVFLEIHY 301 350 BACU019126/1-501 KGSRNASEPP LVFVGKGITF DSGGISIKAA ANMDLMRADV GGAAAICSAI ENSBTAP00000007860/1-519 KGSPNASEPP LVFVGKGITF DSGGISIKAA ANMDLMRADM GGAATICSAI bmy_13840T0/1-553 KGSPNASEPP LVFVGKGITF DSGGISIKAA ANMDLMRADM GGAATICSAI ENSTTRP00000005840/1-513 KGSPNASEPP LVFVGKGITF DXXXXXXXAA ANMDLMRADM GGAATI-SAI 351 400 BACU019126/1-501 GSAAKLDLPI SFVGLAPLCE NMPSGKANKP GDVVRVKDGK TIQVDNTDAE ENSBTAP00000007860/1-519 VSAAKLDLPI NIVGLAPLCE NMPSGKANKP GDVVRARNGK TIQVDNTDAE bmy_13840T0/1-553 VSAAKLDLPI NIVGLAPLCE NMPSGKANKP GDVVRAKNGK TIQVDNTDAE ENSTTRP00000005840/1-513 VSAAKLDLPI NVVGLAPLCE NMPSGKANKP GDVVRAKNGK TIQVDNTDAE 401 450 BACU019126/1-501 GRLVLADALC YVHTFNPKVI ADAATLTGAT DVALGSGATG VFTNSSWLWS ENSBTAP00000007860/1-519 GRLILADALC YAHTFNPKVI INAATLTGAM DIALGSGATG VFTNSSWLWN bmy_13840T0/1-553 GRLILADALC YAHTFNPKVI INAATLTGAM DIALGSGATG VFTNSSWLWN ENSTTRP00000005840/1-513 GRLILADALC YAHTFNPKVI INAATLTGAM DIALGSGATG VFTNSSWLWN 451 500 BACU019126/1-501 KLFETSIETG DRVWRMPLFE HYTRQVVGCQ LADVNNVGKY RSAGARTAAA ENSBTAP00000007860/1-519 KLFEASIETG DRVWRMPLFE HYTRQVIDCQ LADVNNIGKY RSAGACTAAA bmy_13840T0/1-553 KLFEASIETG DRVWRMPLFE HYTRQVVDCQ LADVNNIGKY RSAGACTAAA ENSTTRP00000005840/1-513 KLFEASIETG DRVWRMPLFE HYTRQVVDCQ LADVNNIGKY RSAGACTAAA 501 550 BACU019126/1-501 FLKEFVT-PK WVRLDTAGVM TNK-EVPYLR KGVAGRPTRT LIEF------ ENSBTAP00000007860/1-519 FLKEFVTHPK WAHLDIAGVM TNKDEVPYLR KGMAGRPTRT LIEFLFRFSQ bmy_13840T0/1-553 FLKEFVTHPK WAHLDIAGVM TNKDEVPYLR KGMAGRPTRT LIEFLLRFSQ ENSTTRP00000005840/1-513 FLKEFVTHPK WAHLDIAGVM TNKDEVPYLR KGMAGRPTRT LIEFLLRFSQ 551 600 BACU019126/1-501 --- ENSBTAP00000007860/1-519 DSA bmy_13840T0/1-553 DSA ENSTTRP00000005840/1-513 DSA