KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:33:22 2014 Check: 00 .. Name: bmy_15832T0/1-437 Len: 589 Check: 2063 Weight: 1.00 Name: ENSP00000221856/1-496 Len: 589 Check: 2766 Weight: 1.00 Name: ENSBTAP00000007877/1-496 Len: 589 Check: 2396 Weight: 1.00 Name: BACU002608/1-568 Len: 589 Check: 9405 Weight: 1.00 Name: ENSTTRP00000001605/1-443 Len: 589 Check: 8548 Weight: 1.00 // 1 50 bmy_15832T0/1-437 MEDQREALRK IITTLAVKNE EIQSFIYSLK QMLLNVEANS AKVQEDLEAE ENSP00000221856/1-496 MEEQREALRK IIKTLAVKNE EIQSFIYSLK QMLLNVEANS AKVQEDLEAE ENSBTAP00000007877/1-496 MEDQKEALRK IITTLAVKNE EIQSFIYSLK QMLLNVEANS AKVQEDLEAE BACU002608/1-568 MEDQREALRK IITTLAVKNE EIQSFIYSLK QMLLNVEANS AKVQEDLEAE ENSTTRP00000001605/1-443 MEDQREALRK IITTLAVKNE EIQSFIYSLK QMLLNVEANS AKVQEDLEAE 51 100 bmy_15832T0/1-437 FQSLFSLLEE LKEGMLMKIK QDRASRAYEL QAAKQIKDGC WDLAPTPLPH ENSP00000221856/1-496 FQSLFSLLEE LKEGMLMKIK QDRASRTYEL QNQLAACTRA LE-SSEELLE ENSBTAP00000007877/1-496 FQSLFSLLEE LKEGMLMKIK QDRASRTYEL QNQLAACTRA LE-SSEELLE BACU002608/1-568 FQSLFSLLEE LKEGMLMKIK QDRASRAYEL QNQLAACTRA LE-SSEELLE ENSTTRP00000001605/1-443 FQSLFSLLEE LKEGMLMKIK QDRASRAYEL QNQLAACTRA LE-SSEELLE 101 150 bmy_15832T0/1-437 PCCEGGNAQV RVPWPRALDR NKGEGVPYTH LRGPGLGVHL LPYSVTMAPA ENSP00000221856/1-496 TANQTLQAMD SEDFPQAAKQ IKD------- ---------- ---GVTMAPA ENSBTAP00000007877/1-496 TANQTLLATD SKDFPQAAKQ IKD------- ---------- ---GVTMAPA BACU002608/1-568 TANQTLQATD REDFPQAAKQ IKD------- ---------- ---GVTMAPA ENSTTRP00000001605/1-443 TANQTLQATD RGDFPQAAKQ IKD------- ---------- ---GVTMAPA 151 200 bmy_15832T0/1-437 FRLSLKAKVS DNMSHLMVDF AQERRMLQAL TFLPVPSAPV IDLAESLVAD ENSP00000221856/1-496 FRLSLKAKVS DNMSHLMVDF AQERQMLQAL KFLPVPSAPV IDLAESLVAD ENSBTAP00000007877/1-496 FRLSLKAKVS DNMSHLMVDF AQERRMLQAL TFLPVPSAPV IDLTESLVAD BACU002608/1-568 FRLSLKAKVS DNMSHLMVDF AQERRMLQAL TFLPVPSAPV IDLAESLVAD ENSTTRP00000001605/1-443 FRLSLKAKVS DNMSHLMVDF AQERRMLQGL TFLPVPSAPV IDLAESLVAD 201 250 bmy_15832T0/1-437 NCVTLVWRMP DEDNKIDHYV LEYRRTNFEG PPRLKEDQPW MVIEGIQQTE ENSP00000221856/1-496 NCVTLVWRMP DEDSKIDHYV LEYRRTNFEG PPRLKEDQPW MVIEGIRQTE ENSBTAP00000007877/1-496 NCVTLVWRMP DEDNKIDHFV LEYRRTNFEG PPRLKEDQPW MVIEGIRQTE BACU002608/1-568 NCVTLVWRMP DEDNKIDHYV LEYRRTNFEG PPRLKEDQPW MVIEGIQQTE ENSTTRP00000001605/1-443 NCVTLVWRMP DEDNKIDHYV LEYRRTNFEG PPRLKEDQPW MVIEGIQQTE 251 300 bmy_15832T0/1-437 YTLTGLKFDM KYMNFRVKAC NKAVSGEFSE PVTLET---- ---------- ENSP00000221856/1-496 YTLTGLKFDM KYMNFRVKAC NKAVAGEFSE PVTLET---- ---------- ENSBTAP00000007877/1-496 YTLTGLKFDM KYMNFRVKAC NKAVSGEFSE PVTLET---- ---------- BACU002608/1-568 YTLTGLKFDM KYMNFRVKAC NKAVSGEFSE PVTLETPVSV SLFFCSLSLS ENSTTRP00000001605/1-443 YTLTGLKFDM KYMNFRVKAC NKAVSGEFSE PVTLET---- ---------- 301 350 bmy_15832T0/1-437 ---------- ---------- -----P---- ---------- ---------- ENSP00000221856/1-496 ---------- ---------- -----PAFMF RLDASTSHQN LRVDDLSVEW ENSBTAP00000007877/1-496 ---------- ---------- -----PAFMF RLDASTSHQN LRVDDLSVEW BACU002608/1-568 WSVLVTVSLC ASGFPHLCDS HVCPAPAFMF RLDASTSHQN LRVDDLSVEW ENSTTRP00000001605/1-443 ---------- ---------- -----PAFMF RLDASTSHQN LRVDDLSVEW 351 400 bmy_15832T0/1-437 ---------- ---------- ---------- ---------- ---------- ENSP00000221856/1-496 DAMGGKVQDI KAREKDGKGR TASPINSPAR GTPSPKRMPS GRGGRDRFTA ENSBTAP00000007877/1-496 DAMGGKVQDI KAREKDGKGR TASPVNSPAR GTPSPKRMPS GRGGRDRFTA BACU002608/1-568 DAMGGKVQDI KAREKDGKGR TASPVNSPAR GTPSPKRMPS GRGGRDRFTA ENSTTRP00000001605/1-443 DAMGGKVQDI KAREKDGKGR TASPVNSPAR GTPSPKRMPS GRGGRDRFTA 401 450 bmy_15832T0/1-437 ------GDTL IDGGEHYWEV RYEPDSKAFG LGVAYRSLGR FEQLGKTAAS ENSP00000221856/1-496 ESYTVLGDTL IDGGEHYWEV RYEPDSKAFG VGVAYRSLGR FEQLGKTAAS ENSBTAP00000007877/1-496 ESYTVLGDTL IDGGEHYWEV RYEPDSKAFG VGVAYRSLGR FEQLGKTAAS BACU002608/1-568 ESYTVLGDTL IDGGEHYWEV RYEPDSKAFG LGVAYRSLGR FEQLGKTAAS ENSTTRP00000001605/1-443 ESYTVLGDTL IDGGEHYWEV RYEPDSKAFG LGVAYRSLGR FEQLGKTAAS 451 500 bmy_15832T0/1-437 WCLYVNNWLQ VSFTAKHANK AKVLDTPVPD CLGVHCDFHQ GLLSFYNART ENSP00000221856/1-496 WCLHVNNWLQ VSFTAKHANK VKVLDAPVPD CLGVHCDFHQ GLLSFYNART ENSBTAP00000007877/1-496 WCLHVNNWLQ VSFTAKHANK AKMLDAPVPD CLGVHCDFHQ GLLSFYNGRT BACU002608/1-568 WCLYVNNWLQ VSFTAKHANK AKVLDTPVPD CLGVHCDFHQ GLLSFYNART ENSTTRP00000001605/1-443 WCVYVNNWLQ VSFTAKHANK AKVLDTPVPD CLGVHCDFHQ GLLSFYNART 501 550 bmy_15832T0/1-437 KQLLHTFKAK FTQPLLPAFT ---------- ---------- ---------- ENSP00000221856/1-496 KQVLHTFKTR FTQPLLPAFT ---------- ---------- ---------- ENSBTAP00000007877/1-496 KQLLHTFKAK FTQPLLPAFT ---------- ---------- ---------- BACU002608/1-568 KQLLHTFKAK FTQPLLPAFT VRPPPRPRGK SGGGVRAGFT TEPLCVPPDA ENSTTRP00000001605/1-443 KQL------- ---------- ---------- ---------- ---------- 551 600 bmy_15832T0/1-437 ---VWCGSFH VTAGLQVPSS VRCLQKRGSA TSSSNTSLT ENSP00000221856/1-496 ---VWCGSFQ VTTGLQVPSA VRCLQKRGSA TSSSNTSLT ENSBTAP00000007877/1-496 ---VWCGSFH VTTGLQVPSS VRCLQKRGSA TSSSNTSLT BACU002608/1-568 VPQVWCGSFH VTAGLQVPSS VRCLQKRGSA TSSSNTSLT ENSTTRP00000001605/1-443 ---------- ---------- ---------- ---------