KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:33:25 2014 Check: 00 .. Name: ENSP00000262966/1-471 Len: 570 Check: 3367 Weight: 1.00 Name: ENSBTAP00000007889/1-491 Len: 570 Check: 7107 Weight: 1.00 Name: BACU002607/1-544 Len: 570 Check: 2196 Weight: 1.00 Name: bmy_15830T0/1-411 Len: 570 Check: 6404 Weight: 1.00 Name: ENSTTRP00000001609/1-324 Len: 570 Check: 5605 Weight: 1.00 // 1 50 ENSP00000262966/1-471 MAAPEPLSPA GGAGEEAPEE DEDEAEAEDP ERPNAGAGGG RSGGGGSSVS ENSBTAP00000007889/1-491 PVAPEPLSPA GAAGEEAPDE DEDEAEAEDP ERPGA-SGGA R--------- BACU002607/1-544 ------MHEA LGLGVAADLN FLARRSGLSP PYPPA----- ---------- bmy_15830T0/1-411 MAALEPLSPA GGAGEEVPDE DEDEAEAEDS ERPGA-SGGA RSGGG----- ENSTTRP00000001609/1-324 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000262966/1-471 GGGGGGGAGA GGCGGPGGAL TRRAVTLRVL LKDALLEPGA GVLSIYYLGK ENSBTAP00000007889/1-491 GGGGGGGAGP GSCGGPGGAL TRRAVTLRVL LKDALLEPGA GVLSIYYLGK BACU002607/1-544 -----PGLNP VGDGGVIGSP KARAVTLRVL LNDALLEPGA GVLSIYYLGK bmy_15830T0/1-411 GGGGGGGAGP GSCGGPGGAL TRRAVTLRVL LKDALLEPGA GVLSIYYL-- ENSTTRP00000001609/1-324 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000262966/1-471 KFLGDLQPDG RIMWQETGQT FNSPSAWATH CKKLVNPAKK SGCGWASVKY ENSBTAP00000007889/1-491 KFVGDLQPDG RIVWQETGQV FNSPSAWATH CKKLVNPAKK SGCGWASVKY BACU002607/1-544 KFVGDLQPDG RIVWQETGQV FNSPSAWATH CKKLVNPAKK SGCGWASVKY bmy_15830T0/1-411 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000001609/1-324 ---------- ---------- ---------- ---------- ---------- 151 200 ENSP00000262966/1-471 KGQKLDKYKA TWLRLHQLHT PATAADE--- ---------- ---------- ENSBTAP00000007889/1-491 KGQKLDKYKA AWLRRNQLHM TATAADE--- ---------- ---------- BACU002607/1-544 KGQKLDKYKA AWLRRNQLHI PAAAADEWAP GATTGTEGSG QPEVSVELAG bmy_15830T0/1-411 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000001609/1-324 ---------- ---------- ---------- ---------- ---------- 201 250 ENSP00000262966/1-471 ---------- ---------- SPASEGEEEE LLMEEEEEDV LAGVSAEDKS ENSBTAP00000007889/1-491 ---------- ---------- SPASEGEEEE PLIEEEEEEV LTAASADDKS BACU002607/1-544 RVGSSQLKVP SLSPQPRPRQ SPASEGEEEE LMMEEEEEEV LTGASAEDKS bmy_15830T0/1-411 ---------- ---------- SPASEGEEEE LMMEEEEEEV LTGASAEDKS ENSTTRP00000001609/1-324 ---------- ---------- SPASEGEEEE LMMEEEEEEV LTGASAEDKS 251 300 ENSP00000262966/1-471 RRPLGKSPSE PAHPEATTPG KRVDSKIRVP VRYCMLGSRD LARNPHTLVE ENSBTAP00000007889/1-491 RRPQGKGPSE PVHSEATPPG KRVDNKIRVP VRYCMLGSRD SARNPHTLVE BACU002607/1-544 RRPPVKGPSE PVHPEATPPG KRVENKIRVP VRYCMLGSRD SARNPHTLVE bmy_15830T0/1-411 RRPPVKGLSE PVHPEATPPG KRVENKIRVP VRYCMLGSRD SARNPHTLVE ENSTTRP00000001609/1-324 RRPPVKGPSE PVHPEATPPG KRVENKIRVP VRYCMLGSRD SARNPHTLVE 301 350 ENSP00000262966/1-471 VTSFAAINKF QPFNVAVSSN VLFLLDFHSH LTRSEVVGYL GGRWDVNSQ- ENSBTAP00000007889/1-491 VTSFAAINKF QPFNVAVSSN VLFLLDFHSH LTRSQVVGYL GGRWDINSQ- BACU002607/1-544 VTSFAAINKF QPFNVAISSN VLCLLDFHSH LTRSQVVGYL GGRWDINSQS bmy_15830T0/1-411 VTSFAAINKF QPFNVAISTN VLFLLDFHSH LTRSQVVGYL GGRWDINSQS ENSTTRP00000001609/1-324 VTSFAAINKF QPFNVAISSN VLFLLDFHSH LTRSQVVGYL GGRWDINSQ- 351 400 ENSP00000262966/1-471 ---------- ---------- -----MLTVL RAFPCRSRLG DAETAAAIEE ENSBTAP00000007889/1-491 ---------- ---------- -----MLTVL RAFPCRSRLG DAETAATVEE BACU002607/1-544 GYLGPVGRGV FGAGVDVHAF SRLRAALTVL RAFPCRSRLG DADTAATMEE bmy_15830T0/1-411 GYLGPVGRGV FGAGVDVHAF SRLRAVLTVL RAFPCRSRLG DADTAATMEE ENSTTRP00000001609/1-324 ---------- ---------- -----MLTVL RAFPCRSRLG DADTAAAMEE 401 450 ENSP00000262966/1-471 EIYQSLFLRG LSLVGWYHSH PHSPALPSLQ DIDAQMDYQL RLQGSSNGFQ ENSBTAP00000007889/1-491 EIYQSLLLRG LSLVGWYHSH PHSPALPSLQ DIDKQMDYQL RLQGSSNGFQ BACU002607/1-544 EIYQSLLLRG LSLVGWYHSH PYSPALPSLQ DIDAQMEYQL RLQGSSNGFQ bmy_15830T0/1-411 EIYQSLLLRG LSLVGWYHSH PYSPALPSLQ DIDAQMDYQL RLQGSSNGFQ ENSTTRP00000001609/1-324 EIYQSLLLRG LSLVGWYHSH PYSPALPSLQ DIDAQMDYQL RLQGSSNGFQ 451 500 ENSP00000262966/1-471 PCLALLCSPY YSGNPGPESK ISPFWVMPPP E--------- ---------- ENSBTAP00000007889/1-491 PCLALLCSPY YSGNPGPESK ISPFWVMPPP EQRPSDYGIP MDVEMAYVQD BACU002607/1-544 PCLALLCSPY YSGNPGPESK ISPFWVMPPP EQRPSDYGIP MDVEMAYVQD bmy_15830T0/1-411 PCLALLCSPY YSGNPGPESK ISPFWVMPPP EQRPSDYGIP MDVEMAYVQD ENSTTRP00000001609/1-324 PCLALLCSPY YSGNPGPESK ISPFWVMPPP EQRPSDYGIP MDVEMAYVQD 501 550 ENSP00000262966/1-471 ---------- -MLLVEFYKG SPDLVRLQEP WSQEHTYLDK LKISLASRTP ENSBTAP00000007889/1-491 NFLTNDILHE MMLLVEFYRG APDFIRFQEP WNQEHTYLDK LKISLASRMP BACU002607/1-544 GFLTNDVLHE MMLLVEFYKG AHDLIRFQEP WNQEHTYLDK LKISLASRTP bmy_15830T0/1-411 SFLTNDILHE M--------- ---------- ---------- --ISLASRTP ENSTTRP00000001609/1-324 GFLTNDILHE MMLLVEFYKG APDLVRFQEP WNQEHTYLDK LKISLASRTP 551 600 ENSP00000262966/1-471 KDQSLCHVLE QVCGVLKQGS ENSBTAP00000007889/1-491 KDQGLGHMLE QVYSLLKQGN BACU002607/1-544 KDQGLCHVLE QVYGVLKQGS bmy_15830T0/1-411 KDQGLCHVLE QVYSVLKQGS ENSTTRP00000001609/1-324 KDQGLCHVLE QVYSVLRQGS