KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:33:28 2014 Check: 00 .. Name: ENSP00000376615/1-548 Len: 632 Check: 3507 Weight: 1.00 Name: ENSBTAP00000007899/1-545 Len: 632 Check: 9924 Weight: 1.00 Name: ENSTTRP00000008763/1-417 Len: 632 Check: 1178 Weight: 1.00 Name: bmy_04801T0/1-503 Len: 632 Check: 8290 Weight: 1.00 Name: BACU000917/1-516 Len: 632 Check: 9361 Weight: 1.00 // 1 50 ENSP00000376615/1-548 MTMAAAAVVA RGAGARAATA AALRGGCGTA ARGRPCAGPA RPLCTAPGTA ENSBTAP00000007899/1-545 MATAAVTAAA RGAGARAVT- -ALRDGCRTA ARGRSRTGPT RPLCTAPGTA ENSTTRP00000008763/1-417 ---------- ---------- ---------- ---------- ---------- bmy_04801T0/1-503 --MATAAAVA RGAGARAVA- -ALRSGCRTA ARGRSRAGPA RPLCTAPGTA BACU000917/1-516 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000376615/1-548 PDMKRYLWER YREAKRSTEE LVPSIMSNLL NPDAIFSNNE MSLSDIEIYG ENSBTAP00000007899/1-545 PDMKRYLWER YREAKRSTEE LVPSIMNNLL NPDAIFSNNE MSLSDIEIYG ENSTTRP00000008763/1-417 ---------- ---------- ---------- ---------- ---------- bmy_04801T0/1-503 PDMKRYLRER YREAKRSTAE LVPSIMSNLL NPDAIFSNNE MSLSDIEIYG BACU000917/1-516 --MKRYLRER YREAKRSTAE LVPSIMSNLL NPDAIFSNNE MSLSDIEIYG 101 150 ENSP00000376615/1-548 FDYDYTLVFY SKHLHTLIFN AARDLLINEH RYPAEIRKYE YDPNFAIRGL ENSBTAP00000007899/1-545 FDYDYTLVFY SKHLHTLIFN AARDLLINEH RYPVEIRKYE YDPNFAIRGL ENSTTRP00000008763/1-417 ---------- ---------- ---------- -YPVEIRKYE YDPNFAIRGL bmy_04801T0/1-503 FDYDYTLVFY SKHLHTLIFN AARDLLINEH RYPAEIRKYE YDPNFAIRGL BACU000917/1-516 FDYDYTLVFY SKHLHTLIFN AARDLLINEH RYPAEIRKFE YDPNFAIRGL 151 200 ENSP00000376615/1-548 HYDVQR---- ---------- ---------- ---------- ---------- ENSBTAP00000007899/1-545 HYDVQR---- ---------- ---------- ---------- ---------- ENSTTRP00000008763/1-417 HYDVQR---- ---------- ---------- ---------- ---------- bmy_04801T0/1-503 HYDVQRTGRF LNEELSKQTF QKHTGCFFVY DNLMLIGFIM TPGIFIKYAN BACU000917/1-516 HYDVQR---- ---------- ---------- ---------- ---------- 201 250 ENSP00000376615/1-548 ---------- -----AVLMK IDAFHYIQLG TVYR------ ---------- ENSBTAP00000007899/1-545 ---------- -----AVLMK IDAFHYIQLG TVYR------ ---------- ENSTTRP00000008763/1-417 ---------- -----AVLMK IDAFHYIQLG TVYR------ ---------- bmy_04801T0/1-503 CCALVTCVCA CVFLKAVLMK IDAFHYIQLG TVYRNIDQAT TMLDANGLAC BACU000917/1-516 ---------- -----AVLMK IDAFHYIQLG TVYRNIDQAT TMLDANGLAC 251 300 ENSP00000376615/1-548 ---------G LSVVPDEEVI EMYEGSHVPL EQMSDFYGKS SHGNTMKQFM ENSBTAP00000007899/1-545 ---------G LSVVPDEEVI EMYEGSHVPL EQMSDFYGKS S-GNTMKQFM ENSTTRP00000008763/1-417 ---------G LSVVPDEEVI EMYEGSHVPL EQMSDFYGKS SHGNTMKQFM bmy_04801T0/1-503 EDVFKELGIG LSVVPDEEVI EMYEGSHVPL EQMSDFYGKS SHGNTMKQFM BACU000917/1-516 EDVFKELGIG LSVVPDEEVI EMYEGSHVPL EQMSDFYGKS SHGNTMKQFM 301 350 ENSP00000376615/1-548 DIFSLPEMTL LSCVNEYFLK NNIDYEPVHL YKDVKDSIRD VHIKGIMYRA ENSBTAP00000007899/1-545 DIFSLPEMTL LSCVNEYFLK NNIDYEPVHL YKDVKDSIRD VHTKGIMYRA ENSTTRP00000008763/1-417 DIFSLPEMTL LSCVNEYFLK NNIDYEPVHL YKDVKDSIRD VHTKGIMYRA bmy_04801T0/1-503 DIFSLPEMTL LSCVNEYFLK NNIDYEPVHL YKDVKDSIRD VHTKGIMYRA BACU000917/1-516 DIFSLPEMTL LSCVNEYFLK NNIDYEPVHL YKDVKDSIRD VHTKGIMYRA 351 400 ENSP00000376615/1-548 IEADIEKYIC YAEQTRAVLA KLADHGKKMF LITNSPSSFV DKGMSYIVGK ENSBTAP00000007899/1-545 IEADIEKYIC YAEQTRAVLA KLADHGKKMF LITNSPSSFV DKGMRYIVGK ENSTTRP00000008763/1-417 IEADIEKYIC YPEQTRAVLA KLADHGKKMF LITNSPSSFV DKGMRYIVGK bmy_04801T0/1-503 IEADIEKYIC YPEQTRAVLA KLADHGKKMF LITNSPSSFV DKGMRYIVGK BACU000917/1-516 IEADIEKYIC YPEQTRAVLA KLADHGKKMF LITNSPSSFV DKGMRYIVGK 401 450 ENSP00000376615/1-548 DWRDLFDVVI VQAEKPNFFN DKRRPFRKMN EKGVLLWDKI HKLQKGQIYK ENSBTAP00000007899/1-545 DWRDLFDVVI VQAEKPNFFN DKRRPFRKVN EKGVLLWDKI YKLQKGQIYK ENSTTRP00000008763/1-417 DWRDLFDVVI VQAEKPNFFN DKRRPFRKVN EKGVLLWDKI YKLQKGQIYK bmy_04801T0/1-503 DWRDLFDVVI VQAEKPNFFN DKR------- ---------- ---------- BACU000917/1-516 DWRDLFDVVI VQAEKPNFFN DKRS-----T QPALLPHVIM FPVSVVRPFR 451 500 ENSP00000376615/1-548 QGNLYEFLKL TGWRGSRVLY FGDHIYSDLA DLTLKHGWRT GAIIPELRSE ENSBTAP00000007899/1-545 QGNLYEFLKL TGWRGSKVLY FGDHIYSDLA DLTLKHGWRT GAIIPELRSE ENSTTRP00000008763/1-417 QGNLYEFLKL TGWRGSKVLY FGDHIYSDLA DLTLKHGWRT GAIIPELRSE bmy_04801T0/1-503 ---------- ---------- ---------- ---------- ---------- BACU000917/1-516 KGNLYEFLKL TGWRGSKVLY FGDHIYSDLA DLTLKHGWRT GAIIPELRSE 501 550 ENSP00000376615/1-548 LKIMNTEQYI QTMTWLQTLT GLLEQMQVHR DAESQLVLQE WKKERKEMRE ENSBTAP00000007899/1-545 LKTMNTEQYI QTVAWLQTLT GLLEQMQVHR DAESQLVLQE WKKERKDMRE ENSTTRP00000008763/1-417 LRIMNTEQYI QTMTWLQTLT GLLEQMQVHR DAESQLVLQE WKKERKEMRE bmy_04801T0/1-503 ---------- ---------- ---------- ---------- --------RE BACU000917/1-516 LRIMNTEQYI QTMTWLQTLT GLLEQMQVHR DAESQLVLQE WKKERKEMRE 551 600 ENSP00000376615/1-548 MTKSFFNAQF GSLFRTDQNP TYFLRRLSRF ADIYMASLSC LLNYDVSHTF ENSBTAP00000007899/1-545 MTKGFFNAQF GSLFRTDQNP TYFLRRLSRF ADIYMASLSC LLNYDVSHTF ENSTTRP00000008763/1-417 MTKGSFNTQF GSLFRTDQNP TYFLRRLSRF ADIYMASLSC LLSYDVSHTF bmy_04801T0/1-503 MTKGSFNTQF GSLFRTDQNP TYFLRRLSRF ADIYMASLSC LLSYDVSHTF BACU000917/1-516 MTKGSFNTQF GSLFRTDQNP TYFLRRLSRF ADIYMASLSC LLSYDVSHTF 601 650 ENSP00000376615/1-548 YPRRTPLQHE LPAWSERPPT FGTPLLQEAQ AK ENSBTAP00000007899/1-545 YPRRTPLQHE LPAWSDRPPA ARLPLLQEAQ AK ENSTTRP00000008763/1-417 YPRRTPLQHE LPAWSDRSPA TRPPLLQEAQ AK bmy_04801T0/1-503 YPRRTPLQHE LPAWSDRPPA ARLPLLQEAQ AK BACU000917/1-516 YPRRTPLQHE LPAWSDRPPA ARLPLLQEAQ AK