KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:33:33 2014 Check: 00 .. Name: ENSTTRP00000013985/1-1021 Len: 1230 Check: 3371 Weight: 1.00 Name: BACU012593/1-1065 Len: 1230 Check: 172 Weight: 1.00 Name: bmy_16673T0/1-1131 Len: 1230 Check: 9157 Weight: 1.00 Name: ENSP00000222673/1-1023 Len: 1230 Check: 7374 Weight: 1.00 Name: ENSBTAP00000007922/1-1023 Len: 1230 Check: 7329 Weight: 1.00 // 1 50 ENSTTRP00000013985/1-1021 ---------- ---------- ---------- ---------M FHLRTCAAKL BACU012593/1-1065 MTPHAGAGPR VWCPGVGCRR LIRVELSWRQ TVVRDFRTRM FHLRTCAAKL bmy_16673T0/1-1131 ---------- ---------- ---------- ---------M HVFRDCLA-- ENSP00000222673/1-1023 ---------- ---------- ---------- ---------M FHLRTCAAKL ENSBTAP00000007922/1-1023 ---------- ---------- ---------- ---------M FHLRTCAAKL 51 100 ENSTTRP00000013985/1-1021 RPLTASQTVK TFSQNRPAAA RTFGQVRCYT APVAAEPFLS GTSSNYVEEM BACU012593/1-1065 RPLTASQTVK TFSQNRPAAA RTFGQIRCYT APVAAEPFLS GTSSNYVEEM bmy_16673T0/1-1131 ---------- ---------- ---------- --LKQEPFV- ---------- ENSP00000222673/1-1023 RPLTASQTVK TFSQNRPAAA RTFQQIRCYS APVAAEPFLS GTSSNYVEEM ENSBTAP00000007922/1-1023 RPLTASQTVK TFSQNRPAAA RTFGQIRCYT APVAAEPFLS GTSSNYVEEM 101 150 ENSTTRP00000013985/1-1021 YYAWLENPKS VHKSWDIFFR NTNAGAPPGT AYQSPLPLSL GSLSAVARAQ BACU012593/1-1065 YYAWLENPKS VHKSWDIFFR NTNAGAPPGT AYQSPLPLSL GSLAAVARAQ bmy_16673T0/1-1131 ---------- --QSWDIFFR NTNAGAPPGT AYQSPLPLSL GSLAAVARAR ENSP00000222673/1-1023 YCAWLENPKS VHKSWDIFFR NTNAGAPPGT AYQSPLPLSR GSLAAVAHAQ ENSBTAP00000007922/1-1023 YYAWLENPKS VHKSWDIFFR NTNAGAPPGT AYQSPLPLSP GSLSAVARAG 151 200 ENSTTRP00000013985/1-1021 PLVEVQPNVD KLVEDHLAVQ SLIRAYQIRG HHVAQLDPLG ILDADLDSSV BACU012593/1-1065 PLVEAQPNVD KLVEDHLAVQ SLIRAYQIRG HHVAQLDPLG ILDADLDSSV bmy_16673T0/1-1131 PLVEAQPNVD KLVEDHLAVQ SLIRAYQIRG HHVAQLDPLG ILDADLDSSV ENSP00000222673/1-1023 SLVEAQPNVD KLVEDHLAVQ SLIRAYQIRG HHVAQLDPLG ILDADLDSSV ENSBTAP00000007922/1-1023 PLVEAQPNVD KLVEDHLAVQ SLIRAYQIRG HHVAQLDPLG ILDADLDSSV 201 250 ENSTTRP00000013985/1-1021 PADIISSTDK L--------- ---------- ---------- ---------- BACU012593/1-1065 PADIISSTDK L--------- ---------- ---------- ---------- bmy_16673T0/1-1131 PADIISSTDK LGHLELLSSS SPLSPRSTQA RPKLCSPVLK PPQHHLAVFK ENSP00000222673/1-1023 PADIISSTDK L--------- ---------- ---------- ---------- ENSBTAP00000007922/1-1023 PADIISSTDK L--------- ---------- ---------- ---------- 251 300 ENSTTRP00000013985/1-1021 ---------X XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXMA BACU012593/1-1065 ---------G FYGLDESDLD KVFHLPTTTF IGGQESALPL REIIRRLEMA bmy_16673T0/1-1131 ERLRMLTVGG FYGLDESDLD KVFHLPTTTF IGGQESALPL REIIRRLEMA ENSP00000222673/1-1023 ---------G FYGLDESDLD KVFHLPTTTF IGGQESALPL REIIRRLEMA ENSBTAP00000007922/1-1023 ---------G FYGLDESDLD KVFHLPTTTF IGGQESALPL REIIRRLEMA 301 350 ENSTTRP00000013985/1-1021 YCQHIGVEFM FINDLEQCQW IRQKFETPGI MQFTNEEKRT LLARLVRSTR BACU012593/1-1065 YCQHIGVEFM FINDLEQCQW IRQKFETPGI LQFTNEEKRT LLARLVRSTR bmy_16673T0/1-1131 YCQHIGVEFM FINDLEQCQW IRQKFETPGI LQFTNEEKRT LLARLVRSTR ENSP00000222673/1-1023 YCQHIGVEFM FINDLEQCQW IRQKFETPGI MQFTNEEKRT LLARLVRSTR ENSBTAP00000007922/1-1023 YCQHIGVEFM FINDLEQCQW IRQKFETPGV MQFTNEEKRT LLARLVRSTR 351 400 ENSTTRP00000013985/1-1021 FEEFLQRKWS SEKRFGLEGC EVLIPALKTI IDKSSENGVD YVIMGMPHRG BACU012593/1-1065 FEEFLQRKWS SEKRFGLEGC EVLIPALKTI IDKSSENGVD YVIMGMPHRG bmy_16673T0/1-1131 FEEFLQRKWS SEKRFGLEGC EVLIPALKTI IDKSSENGVD YVIMGMPHRG ENSP00000222673/1-1023 FEEFLQRKWS SEKRFGLEGC EVLIPALKTI IDKSSENGVD YVIMGMPHRG ENSBTAP00000007922/1-1023 FEEFLQRKWS SEKRFGLEGC EVLIPALKTI IDKSSENGVD YVIMGMPHRG 401 450 ENSTTRP00000013985/1-1021 RLNVLANVIR KELEQIFCQF DSKLEAADEG SGDVKYHLGM YHRRINRVTD BACU012593/1-1065 RLNVLANVIR KELEQIFCQF DSKLEAADEG SGDVKYHLGM YHRRINRVTD bmy_16673T0/1-1131 RLNVLANVIR KELEQIFCQF DSKLEAADEG SGDVKYHLGM YHRRINRVTD ENSP00000222673/1-1023 RLNVLANVIR KELEQIFCQF DSKLEAADEG SGDVKYHLGM YHRRINRVTD ENSBTAP00000007922/1-1023 RLNVLANVIR KELEQIFCQF DSKLEAADEG SGDVKYHLGM YHRRINRVTD 451 500 ENSTTRP00000013985/1-1021 RNITLSLVAN PSHLEAADPV VMGKTKAEQF YCGDTEGKKV MSIVLHGDAA BACU012593/1-1065 RNITLSLVAN PSHLEAADPV VMGKTKAEQF YCGDTEGKKV MSILLHGDAA bmy_16673T0/1-1131 RNITLSLVAN PSHLEAADPV VMGKTKAEQF YCGDTEGKKV MSILLHGDAA ENSP00000222673/1-1023 RNITLSLVAN PSHLEAADPV VMGKTKAEQF YCGDTEGKKV MSILLHGDAA ENSBTAP00000007922/1-1023 RNITLSLVAN PSHLEAADPV VMGKTKAEQF YCGDTEGKKV MSILLHGDAA 501 550 ENSTTRP00000013985/1-1021 FAGQGIVYET F---HVSDLP SYTTHGTVHV VVNNQIGFTT DPRMARSSPY BACU012593/1-1065 FAGQGIVYET FXXXXXXXXX XXXXXXXXXV VVNNQIGFTT DPRMARSSPY bmy_16673T0/1-1131 FAGQGIVYET F---HLSDLP SYTTHGTVHV VVNNQIGFTT DPRMARSSPY ENSP00000222673/1-1023 FAGQGIVYET F---HLSDLP SYTTHGTVHV VVNNQIGFTT DPRMARSSPY ENSBTAP00000007922/1-1023 FAGQGIVYET F---HLSDLP SYTTHGTVHV VVNNQIGFTT DPRMARSSPY 551 600 ENSTTRP00000013985/1-1021 PTDVARVVNA PIFHVNADDP EAVMYVCKVA AEWRSTFHKD VVVDLVCYRR BACU012593/1-1065 PTDVARVVNA PIFHVNADDP EAVMYVCKVA AEWRSTFHKD VVVDLVCYRR bmy_16673T0/1-1131 PTDVARVVNA PIFHVNADDP EAVMYVCKVA AEWRSTFHKD VVVDLVCYRR ENSP00000222673/1-1023 PTDVARVVNA PIFHVNSDDP EAVMYVCKVA AEWRSTFHKD VVVDLVCYRR ENSBTAP00000007922/1-1023 PTDVARVVNA PIFHVNSDDP EAVMYVCKVA AEWRSTFHKD VVVDLVCYRR 601 650 ENSTTRP00000013985/1-1021 NGHNEMDEPM FTQPLMYKQI RKQKPVLQKY AEVLVSQGVV NQPEYEXXXX BACU012593/1-1065 NGHNEMDEPM FTQPLMYKQI RKQKPVLQKY AEVLVSQGVV NQPEYEEEIS bmy_16673T0/1-1131 NGHNEMDEPM FTQPLMYKQI RKQKPVLQKY AEVLVSQGVV NQPEYEEEIS ENSP00000222673/1-1023 NGHNEMDEPM FTQPLMYKQI RKQKPVLQKY AELLVSQGVV NQPEYEEEIS ENSBTAP00000007922/1-1023 NGHNEMDEPM FTQPLMYKQI RKQKPVLQKY AELLVSQGVV NQPEYEEEIS 651 700 ENSTTRP00000013985/1-1021 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XFFT-DEQPR SMTCPST-LT BACU012593/1-1065 KYDKICEEAF TRSKDEKILH IKHWLDSPWP GFFTLDGQPR SMTCPSTGLT bmy_16673T0/1-1131 KYDKICEEAF TRSKDEKILH IKHWLDSPWP GFFTLDGQPR SMTCPSTGLT ENSP00000222673/1-1023 KYDKICEEAF ARSKDEKILH IKHWLDSPWP GFFTLDGQPR SMSCPSTGLT ENSBTAP00000007922/1-1023 KYDKICEEAF ARSKDEKILH IKHWLDSPWP GFFTLDGQPR SMTCPSTGLT 701 750 ENSTTRP00000013985/1-1021 EDILAHIGNV ASSVPVENFT IHG------- ---------- ---------- BACU012593/1-1065 EDILTHIGNV ASSVPVENFT IHG------- ---------- ---------- bmy_16673T0/1-1131 EDILTHIGNV ASSVPVENFT IHGGKGATRT FGSVGPSPVP AVSRHETSPR ENSP00000222673/1-1023 EDILTHIGNV ASSVPVENFT IHG------- ---------- ---------- ENSBTAP00000007922/1-1023 EDILTHIGNV ASSVPVEDFT IHG------- ---------- ---------- 751 800 ENSTTRP00000013985/1-1021 ---------- ---------- ---------- ---------- ---------- BACU012593/1-1065 ---------- ---------- ---------- ---------- ---------- bmy_16673T0/1-1131 PPEVPARSRP GWLDEGSPRL TSPLPRRGPQ PAEQWRKGRD VTASLAWSPL ENSP00000222673/1-1023 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000007922/1-1023 ---------- ---------- ---------- ---------- ---------- 801 850 ENSTTRP00000013985/1-1021 ---------- ---------- ---------- ---------- GLSRILKTRG BACU012593/1-1065 ---------- ---------- ---------- ---------- GLSRILKTRG bmy_16673T0/1-1131 SSLPRSPGES GLPKAGSEGS SALVPSGRVC RAAGEHAVSA GLSRILKTRG ENSP00000222673/1-1023 ---------- ---------- ---------- ---------- GLSRILKTRG ENSBTAP00000007922/1-1023 ---------- ---------- ---------- ---------- GLSRILKTRG 851 900 ENSTTRP00000013985/1-1021 ELVKNRTVDW ALAEYMAFGS LLKEGIHIRL SGQDVERGTF SHRHHVLHDQ BACU012593/1-1065 ELVKNRTVDW ALAEYMAFGS LLKEGIHIRL SGQDVERGTF SHRHHVLHDQ bmy_16673T0/1-1131 ELVKNRTVDW ALAEYMAFGS LLKEGIHIRL SGQDVERGTF SHRHHVLHDQ ENSP00000222673/1-1023 EMVKNRTVDW ALAEYMAFGS LLKEGIHIRL SGQDVERGTF SHRHHVLHDQ ENSBTAP00000007922/1-1023 ELVKNRTVDW ALAEYMAFGS LLKEGIHIRL SGQDVERGTF SHRHHVLHDQ 901 950 ENSTTRP00000013985/1-1021 NVDKRTCIPM NHLWPNQAPY TVCNSSLSEY GVLGFELGFA MASPNALVLW BACU012593/1-1065 NVDKRTCIPM NHLWPNQAPY TVCNSSLSEY GVLGFELGFA MASPNALVLW bmy_16673T0/1-1131 NVDKRTCIPM NHLWPNQAPY TVCNSSLSEY GVLGFELGFA MASPNALVLW ENSP00000222673/1-1023 NVDKRTCIPM NHLWPNQAPY TVCNSSLSEY GVLGFELGFA MASPNALVLW ENSBTAP00000007922/1-1023 NVDKRTCIPM NHLWPNQAPY TVCNSSLSEY GVLGFELGFA MASPNALVLW 951 1000 ENSTTRP00000013985/1-1021 EAQFGDFHNT AQCIIDQFIC PGQAKWVRQN GIVLLLPHGM EGMGPEHSSA BACU012593/1-1065 EAQFGDFHNT AQCIIDQFIC PGQAKWVRQN GIVLLLPHGM EGMGPEHSSA bmy_16673T0/1-1131 EAQFGDFHNT AQCIIDQFIC PGQAKWVRQN GIVLLLPHGM EGMGPEHSSA ENSP00000222673/1-1023 EAQFGDFHNT AQCIIDQFIC PGQAKWVRQN GIVLLLPHGM EGMGPEHSSA ENSBTAP00000007922/1-1023 EAQFGDFHNT AQCIIDQFIC PGQAKWVRQN GIVLLLPHGM EGMGPEHSSA 1001 1050 ENSTTRP00000013985/1-1021 RPERFLQMCN DDPDVLPDLK EANFDINQLY DCNWVVVNCS TPGNFFHVLR BACU012593/1-1065 RPERFLQMCN DDPDVLPDLK EANFDINQLY DCNWVVVNCS TPGNFFHVLR bmy_16673T0/1-1131 RPERFLQMCN DDSDVLPDLK EANFDINQLY DCNWVVVNCS TPGNFFHVLR ENSP00000222673/1-1023 RPERFLQMCN DDPDVLPDLK EANFDINQLY DCNWVVVNCS TPGNFFHVLR ENSBTAP00000007922/1-1023 RPERFLQMCN DDPDVLPDLK EANFDINQLY DCNWVVVNCS TPGNFFHVLR 1051 1100 ENSTTRP00000013985/1-1021 RQILLPFRKP LIIFTPKSLL RHPEARSSFD EMLPGTHFQR VIPEDGPAAQ BACU012593/1-1065 RQILLPFRKP LIIFTPKSLL RHPEARSSFD EMLPGTHFQR VIPEDGPAAQ bmy_16673T0/1-1131 RQILLPFRKP LIIFTPKSLL RHPEARSSFD EMLPGTHFQR VIPEDGPAAQ ENSP00000222673/1-1023 RQILLPFRKP LIIFTPKSLL RHPEARSSFD EMLPGTHFQR VIPEDGPAAQ ENSBTAP00000007922/1-1023 RQILLPFRKP LIIFTPKSLL RHPEARSNFD EMLPGTHFQR VIPEDGPAAQ 1101 1150 ENSTTRP00000013985/1-1021 NPENVKRLLF CTGKVYYDLT RERKARDMAE QVAITRIEQL SPFPFDLLLQ BACU012593/1-1065 NPENVKRLLF CTGKVYYDLT RERKARDMAE QVAITRIEQL SPFPFDLLLQ bmy_16673T0/1-1131 NPENVKRLLF CTGKVYYDLT RERKARDMAE QVAITRIEQL SPFPFDLLLQ ENSP00000222673/1-1023 NPENVKRLLF CTGKVYYDLT RERKARDMVG QVAITRIEQL SPFPFDLLLK ENSBTAP00000007922/1-1023 NPGNVKRLLF CTGKVYYDLT RERKARDMVE QVAITRIEQL SPFPFDLLLQ 1151 1200 ENSTTRP00000013985/1-1021 EVQKYPSAEL AWCQEEHKNQ GYYDYVKPRL RTTINRAKPV WYAGRDPAAA BACU012593/1-1065 EVQKYPNAEL AWCQEEHKNQ GYYDYVKPRL RTTINRAKPV WYAGRDPAAA bmy_16673T0/1-1131 EVQRYPSAEL AWCQEEHKNQ GYYDYVKPRL RTTISRAKPV WYAGRDPAAA ENSP00000222673/1-1023 EVQKYPNAEL AWCQEEHKNQ GYYDYVKPRL RTTISRAKPV WYAGRDPAAA ENSBTAP00000007922/1-1023 EVQKYPSAEL AWCQEEHKNQ GYYDYVKPRL RTTISRAKPV WYAGRDPAAA 1201 1250 ENSTTRP00000013985/1-1021 PATGNKKTHL TELQRLLDTA FDLDAFKKFS BACU012593/1-1065 PATGNKKTHL TELQRLLDTA FDLDAFKKFS bmy_16673T0/1-1131 PATGNKKTHL TELQRLLDTA FDLDAFKKFS ENSP00000222673/1-1023 PATGNKKTHL TELQRLLDTA FDLDVFKNFS ENSBTAP00000007922/1-1023 PATGNKKTHL TELQRLLDTA FDLDAFKNFS