KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:33:34 2014 Check: 00 .. Name: ENSP00000254079/1-204 Len: 215 Check: 7881 Weight: 1.00 Name: ENSTTRP00000007756/1-212 Len: 215 Check: 1153 Weight: 1.00 Name: ENSBTAP00000007930/1-202 Len: 215 Check: 3274 Weight: 1.00 Name: bmy_12739T0/1-171 Len: 215 Check: 2177 Weight: 1.00 Name: BACU007011/1-206 Len: 215 Check: 2786 Weight: 1.00 // 1 50 ENSP00000254079/1-204 MDPKDRKKIQ FSVPAPPSQL DPRQVEMIRR RRPTPAMLFR LSEHSSPEEE ENSTTRP00000007756/1-212 MDPKDRKKIQ FSVPAPPSQL DPRQVEMIRR RRPTPAMLFR LSEHSSPEEE ENSBTAP00000007930/1-202 MDPKDRKKIQ FSVPAPPSQL DPRQVEMIRR RRPTPAMLFR LSEHSSPEEE bmy_12739T0/1-171 MDPKDRKKIQ FSVPAPPSQL DPRQVEMIRR RRPTPAMLFR LSEHSSP--- BACU007011/1-206 MDPKDRKKIQ FSVPAPPSQL DPRQVEMIRR RRPTPAMLFR LSEHSSPEED 51 100 ENSP00000254079/1-204 ASPH------ ----QRASGE GHHLKSKRPN PCAYTPPSLK AVQRIAESHL ENSTTRP00000007756/1-212 ASPHQVTHLT WYFPQRASGE GHHLKSKRPN PCAYTPPSLK AVQRIAESHL ENSBTAP00000007930/1-202 ASPH------ ----QRASGE GHHLKSKRSN PCAYTPPSLK AVQRIAESHL bmy_12739T0/1-171 ---------- ---------- ---------- ---------- AVQRIAESHL BACU007011/1-206 ASPHQ----- ----QRASGE GHHLKSKRAN PCAYTPPSLK AVQRIAESHL 101 150 ENSP00000254079/1-204 QSISNLNENQ ASEEEDELGE LRELGYPREE DEEEEEDD-E EEEEEEDSQA ENSTTRP00000007756/1-212 QSISNLGESQ ASEEEDELGE LRELGYPREE DEEEEDEE-- -EEEDEDSQA ENSBTAP00000007930/1-202 QSISNLGENQ ASEEEDELGE LRELGYPREE EEEEEEED-- -EEEEEDSQA bmy_12739T0/1-171 QSISNVGENQ ASEEEDELGE LRELGYPREE EEEEEEDD-E EEEEEEDSQA BACU007011/1-206 QSISNVGENQ ASEEEDELGE LRELGYPREE EEEEEEDDEE EEEEEEDSQA 151 200 ENSP00000254079/1-204 EVLKVIRQSA GQKTTCGQGL EGPWERPPPL DESERDGGSE DQVEDPALSE ENSTTRP00000007756/1-212 EILKGGRGSA GQKTTFGQGL EGPWERPPPL DEPQRDGSSE DQVEDPALNE ENSBTAP00000007930/1-202 EVLKGSRGSA GQKTTYGQGL EGPWERPPPL DGPQRDGSSE DQVEDPALNE bmy_12739T0/1-171 EILKGSRGSA GQKTTCGQGL EGPWERPPPL DEPQRDGSSE DQVEDPALNE BACU007011/1-206 EILKGSRGSA GQKTTCGQGL EGPWERPPPL DEPQRDGSSE DQVEDPALNE 201 250 ENSP00000254079/1-204 PGEEPQRPSP SEPGT ENSTTRP00000007756/1-212 PGEEPQRPAH PEPGT ENSBTAP00000007930/1-202 PGEEPQRPAH PEPGT bmy_12739T0/1-171 PGEEPQRPAH PEPGT BACU007011/1-206 PGEEPQRPAH PEPGT