KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:33:37 2014 Check: 00 .. Name: bmy_07382T0/1-589 Len: 768 Check: 932 Weight: 1.00 Name: ENSP00000423897/1-755 Len: 768 Check: 7138 Weight: 1.00 Name: ENSBTAP00000007937/1-755 Len: 768 Check: 7526 Weight: 1.00 Name: ENSTTRP00000000607/1-736 Len: 768 Check: 8706 Weight: 1.00 Name: BACU007643/1-709 Len: 768 Check: 404 Weight: 1.00 // 1 50 bmy_07382T0/1-589 -MCVFFLF-- ---------- ---------- ---------- ---------- ENSP00000423897/1-755 MNVIYFPLHI FVVYSRAYTS LVLVGCTNLC AVLFARCLDD HLVSLRMSGS ENSBTAP00000007937/1-755 VNVIYFPFNL FIVYSRAYTS LVLVGCTNLC AVLFARCLDD HLVSLRMSGS ENSTTRP00000000607/1-736 VNVIYFPFNL FIVYNRAYTS LVLVGCTN-C AVLFARCLDD HLVSLRMSGS BACU007643/1-709 ---------- ---------- ---------- ---------- ------MSGS 51 100 bmy_07382T0/1-589 ---------- ---------- ---------- ---------- ---------- ENSP00000423897/1-755 RKEFDVKQIL KIRWRWFGHQ ASSPNSTVDS QQGEFWNRGQ TGANGGRKFL ENSBTAP00000007937/1-755 RKEFDVKQIL KIRWRWFSHQ ASSPNSTVDS QQGEFWNRGQ TGANGGRKFL ENSTTRP00000000607/1-736 RKEFDVKQIL KIRWRWFSHQ GSSPNSTVDS QQGEFWNRGQ TGANGGRKFL BACU007643/1-709 RKEFDVKQIL KIRWRWFSHQ ASSPNSTVDS QQGEFWNRGQ TGANGGRKFL 101 150 bmy_07382T0/1-589 ---------- ---------- ---------- ---------- ---------- ENSP00000423897/1-755 DPCSLQLPLA SIGYRRSSQL DFQNSPSWPM ASTSEVPAFE FTAEDCGGAH ENSBTAP00000007937/1-755 DPCSLQLPLA SIGYRRSSQL DFQNSPSWPM ASTSEVPAFE FTAEDCGGAH ENSTTRP00000000607/1-736 DPCSLQLPLA SIGYRRSSQL DFQNSPSWPM ASTSEVPAFE FTAEDCGGAH BACU007643/1-709 DPCSLQLPLA SIGYRRSSQL DFQNSPSWPM ASTSEVPAFE FTAEDCGGAH 151 200 bmy_07382T0/1-589 ---------- ---------- ---RTSNSSQ TLSACHTMEP CSSDEFFQAL ENSP00000423897/1-755 WLDRPEVDDG TSEEENESDS SSCRTSNSSQ TLSSCHTMEP CTSDEFFQAL ENSBTAP00000007937/1-755 WLDRPEVDDD TSEEENESDS SSCRTSNSSQ TLSSCHTMEP CSSDEFFQAL ENSTTRP00000000607/1-736 WLDRPEVDDG TSEEENESDS SSCRTSNSSQ TVSSCHTMEP CSSDEFFQAL BACU007643/1-709 WLDRPEVDDG TSEEENESDS SSCRTSNSSQ TLSACHTMEP CSSDEFFQAL 201 250 bmy_07382T0/1-589 NHAEQTFKKM ENYLRHKQLC DVILVAGDRR IPAHRLVLSS VSDYFAAMFT ENSP00000423897/1-755 NHAEQTFKKM ENYLRHKQLC DVILVAGDRR IPAHRLVLSS VSDYFAAMFT ENSBTAP00000007937/1-755 NHAEQTFKKM ENYLRHKQLC DVILVAGDRR IPAHRLVLSS VSDYFAAMFT ENSTTRP00000000607/1-736 NHAEQTFKKM ENYLRHKQLC DVILVAGDRR IPAHRLVLSS VSDYFAAMFT BACU007643/1-709 NHAEQTFKKM ENYLRHKQLC DVILVAGDRR IPAHRLVLSS VSDYFAAMFT 251 300 bmy_07382T0/1-589 NDVREARQEE IKMEGVEPNS LWSLIQYAYT GRLELKEDNI ECLLSTACLL ENSP00000423897/1-755 NDVREARQEE IKMEGVEPNS LWSLIQYAYT GRLELKEDNI ECLLSTACLL ENSBTAP00000007937/1-755 SDVREARQEE IKMEGVEPNS LWSLIQYAYT GRLELKEDNI ECLLSTACLL ENSTTRP00000000607/1-736 NDVREARQEE IKMEGVEPNS LWSLIQYAYT GRLELKEDNI ECLLSTACLL BACU007643/1-709 NDVREARQEE IKMEGVEPNS LWSLIQYAYT GRLELKEDNI ECLLSTACLL 301 350 bmy_07382T0/1-589 QLSQVVEACC KFLMKQLHPS NCLGIRSFAD AQGCTDLHKV AHNYTMEHFM ENSP00000423897/1-755 QLSQVVEACC KFLMKQLHPS NCLGIRSFAD AQGCTDLHKV AHNYTMEHFM ENSBTAP00000007937/1-755 QLSQVVEACC KFLMKQLHPS NCLGIRSFAD AQGCTDLHKV AHNYTMENFM ENSTTRP00000000607/1-736 QLSQVVEACC KFLMKQLHPS NCLGIRSFAD AQGCTDLHKV AHNYTMEHFM BACU007643/1-709 QLSQVVEACC KFLMKQLHPS NCLGIRSFAD AQGCTDLHKV AHNYTMEHFM 351 400 bmy_07382T0/1-589 EVIRNQEFVL LPASEIAKLL ASDDMNIPSE ETILNALLTW VRHDLEQRRK ENSP00000423897/1-755 EVIRNQEFVL LPASEIAKLL ASDDMNIPNE ETILNALLTW VRHDLEQRRK ENSBTAP00000007937/1-755 EVIRNQEFVL LPASEIAKLL ASDDMNIPNE ETILNALLTW VRHDLEQRRK ENSTTRP00000000607/1-736 EVIRNQEFVL LPASEIAKLL ASDDMNIPSE ETILNALLTW VRHDLEERRK BACU007643/1-709 EVIRNQEFVL LPASEIAKLL ASDDMNIPSE ETILNALLTW VRHDLEQRRK 401 450 bmy_07382T0/1-589 DLSKLLAYIR LPLLAPQFLA DMENNALFRD DIECQKLIME AMKYHLLPER ENSP00000423897/1-755 DLSKLLAYIR LPLLAPQFLA DMENNVLFRD DIECQKLIME AMKYHLLPER ENSBTAP00000007937/1-755 DLSKLLAYIR LPLLAPQFLA DMENNALFRD DIECQKLIME AMKYHLLPER ENSTTRP00000000607/1-736 DLSKLLAYIR LPLLAPQFLA DMENNALFRD DIQCQKLIME AMKYHLLPER BACU007643/1-709 DLSKLLAYIR LPLLAPQFLA DMENNALFRD DIECQKLIME AMKYHLLPER 451 500 bmy_07382T0/1-589 RPMLQSPRTK PRKSTV---- ---------G ATSIEKYDLR TNMWTPVANM ENSP00000423897/1-755 RPMLQSPRTK PRKSTVGTLF AVGGMDSTKG ATSIEKYDLR TNMWTPVANM ENSBTAP00000007937/1-755 RPMLQSPRTK PRKSTVGTLF AVGGMDSTKG ATSIEKYDLR TNMWTPVATM ENSTTRP00000000607/1-736 RPMLQSPRTK PRKSTVGTLF AVGGMDSTKG ATSIEKYDLR TNMWTPVANM BACU007643/1-709 RPMLQSPRTK PRKSTVGTLF AVGGMDSTKG ATSIEKYDLR TNMWTPVANM 501 550 bmy_07382T0/1-589 NGRRLQFGVA VLDDKLYVVG GRDGLKTLNT VECYNPKTKT WSVMPPMSTH ENSP00000423897/1-755 NGRRLQFGVA VLDDKLYVVG GRDGLKTLNT VECYNPKTKT WSVMPPMSTH ENSBTAP00000007937/1-755 NGRRLQFGVA VLDDKLYVVG GRDGLKTLNT VECYNPKTKT WSVMPPMSTH ENSTTRP00000000607/1-736 NGRRLQFGVA VLDDKLYVVG GRDGLKTLNT VECYNPKTKT WSVMPPMSTH BACU007643/1-709 NGRRLQFGVA VLDDKLYVVG GRDGLKTLNT VECYNPKTKT WSVMPPMSTH 551 600 bmy_07382T0/1-589 RHGLGVAVLE GPMYAVGGHD GWSYLNTVER WDPQARQWNF VATMSTPRST ENSP00000423897/1-755 RHGLGVAVLE GPMYAVGGHD GWSYLNTVER WDPQARQWNF VATMSTPRST ENSBTAP00000007937/1-755 RHGLGVAVLE GPMYAVGGHD GWSYLNTVER WDPQARQWNF VATMSTPRST ENSTTRP00000000607/1-736 RHGLGVAVLE GPMYAVGGHD GWSYLNTVER WDPQARQWNF VATMSTPRST BACU007643/1-709 RHGLGVAVLE GPMYAVGGHD GWSYLNTVER WDPQARQWNF VATMSTPRST 601 650 bmy_07382T0/1-589 VGVAVLSGKL YAVGGRDGSS CLKSVECFDP HTNKWTLCAQ MSKRRGGVGV ENSP00000423897/1-755 VGVAVLSGKL YAVGGRDGSS CLKSVECFDP HTNKWTLCAQ MSKRRGGVGV ENSBTAP00000007937/1-755 VGVAVLSGKL YAVGGRDGSS CLKSVECFDP HTNKWTLCAQ MSKRRGGVGV ENSTTRP00000000607/1-736 VGVAVLSGKL YAVGGRDGSS CLKSVECFDP HTNKWTLCAQ MSKRRGGVGV BACU007643/1-709 VGVAVLSGKL YAVGGRDGSS CLKSVECFDP HTNKWTLCAQ MSKRRGGVGV 651 700 bmy_07382T0/1-589 TTWNGLLYAI GGHDAPASNL TSRLSDCVER YDPKTDMWTA VASMSISRDA ENSP00000423897/1-755 TTWNGLLYAI GGHDAPASNL TSRLSDCVER YDPKTDMWTA VASMSISRDA ENSBTAP00000007937/1-755 TTWNGLLYAI GGHDAPASNL TSRLSDCVER YDPKTDMWTA VASMSISRDA ENSTTRP00000000607/1-736 TTWNGLLYAI GGHDAPASNL TSRLSDCVER YDPKTDMWTA VASMSISRDA BACU007643/1-709 TTWNGLLYAI GGHDAPASNL TSRLSDCVER YDPKTDMWTA VASMSISRDA 701 750 bmy_07382T0/1-589 VGVCLLGDKL YAVGGYDGQT YLNTVEAYDP QTNEWTQLKC IDSYWAPSSP ENSP00000423897/1-755 VGVCLLGDKL YAVGGYDGQA YLNTVEAYDP QTNEWTQVAP L--CLGRAGA ENSBTAP00000007937/1-755 VGVCLLGDKL YAVGGYDGQT YLNTVEAYDP QTNEWTQVAP L--CLGRAGA ENSTTRP00000000607/1-736 VGVCLLGDKL YAVGGYDGQT YLNTVEAYDP QTNEWTQ--- ---------- BACU007643/1-709 VGVCLLGDKL YAVGGYDGQT YLNTVEAYDP QTNEWTQVAP L--CLGRAGA 751 800 bmy_07382T0/1-589 SFKTILVRTY LRYELPSV ENSP00000423897/1-755 CVVTVKL--- -------- ENSBTAP00000007937/1-755 CVVTVKL--- -------- ENSTTRP00000000607/1-736 ---------- -------- BACU007643/1-709 CVVTVKL--- --------