KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:33:43 2014 Check: 00 .. Name: ENSP00000326253/1-261 Len: 383 Check: 4709 Weight: 1.00 Name: bmy_04866T0/1-320 Len: 383 Check: 1057 Weight: 1.00 Name: ENSBTAP00000007986/1-254 Len: 383 Check: 5616 Weight: 1.00 Name: BACU018777/1-245 Len: 383 Check: 8909 Weight: 1.00 Name: ENSTTRP00000003368/1-259 Len: 383 Check: 1211 Weight: 1.00 // 1 50 ENSP00000326253/1-261 MDEALETQLK TSRGRFSATE SLPTLELLSQ VDMDCRVHMR PIGLTWVLQL bmy_04866T0/1-320 ---------- ---------- ---------- --MACRGCTR PRGLAWALQL ENSBTAP00000007986/1-254 ---------- ---------- ---------- --MACRGRTR PRALAWALQL BACU018777/1-245 ---------- ---------- ------LLSQ VDMACRGCTR PRDLAWALQL ENSTTRP00000003368/1-259 MDEALEVQLQ --RREPFSAS ESPPIDLLSQ VDMVCRGCTR PRGLAWALQL 51 100 ENSP00000326253/1-261 TLAWILLEAC GGSRPLQARS QQHHGLAADL GKGKLHLAGP ---------- bmy_04866T0/1-320 TLAWILLGAC GGSHPLPARS QRHHRLATNL GTSQLHLA-- ---------- ENSBTAP00000007986/1-254 TLAWMLLGAC GGSHPLPARS QRHYRLATNL GTDQLHLEEG PQALVPQLYL BACU018777/1-245 TLAWILLGAC GGSHPLPVRS QRHHRLATNL GTSQLHLADG ---------- ENSTTRP00000003368/1-259 TLAWILLGAC GGSHPLPARS QRHHRLVTNL GTSQLHLAGH ---------- 101 150 ENSP00000326253/1-261 ---------- -----CCPSE MDTTETSGPG NHPERCGVPS PE-------- bmy_04866T0/1-320 ---------- ---------E MNTPEALDPG IVSVRCGELS PGCPDQGTEP ENSBTAP00000007986/1-254 RTQDWNSLES LSLWPSFPSE MNPPEASDSG LVPVRCGELS PR-------- BACU018777/1-245 -----NSLES PSPWLSSPSE MNTPEALDPG IVSVRCGELS PG-------- ENSTTRP00000003368/1-259 ---------- -----SCPSE MNTPEASDPG IVSGSCGELS PG-------- 151 200 ENSP00000326253/1-261 ---------- -----CESFL EHLQRALRSR FRLRLLGVRQ AQPLCEELCQ bmy_04866T0/1-320 LRILTYPGLS LPMSRCESFL GHLQVALRSR FHLLLLGVRQ THPLCSELCD ENSBTAP00000007986/1-254 ---------- -----CESFL VHLQAALRSR FHLVLLGVRQ TQPLCSELCD BACU018777/1-245 ---------- -----CESFL EHLQVALRSR FHLLLLGVRQ TQPLCSELCD ENSTTRP00000003368/1-259 ---------- -----CESFL GNLQVALRSR FHLLLLGVRQ TQPLCSELCD 201 250 ENSP00000326253/1-261 AWFANCEDDI TCGPTWLPLS EKRGCEPSCL TYGQ------ TFADGTDLCR bmy_04866T0/1-320 AWFATCESDI ICSPTWLPLL EKRGCEPGCT TYGQGIWTPP TRTQTSPLPA ENSBTAP00000007986/1-254 AWFATCESDV ICSPTWLPLL EKRGCEPGCT TYRQ------ TFADGAELCR BACU018777/1-245 AWFATCESDI ICSPTWLPLL EKRGCEPGCT TYGQ------ TFADGAELCR ENSTTRP00000003368/1-259 AWFATCESDI ICSPTWLPLL EKRGCEPGCT TYGQ------ TFADGAELCR 251 300 ENSP00000326253/1-261 SAL------- ---------- ---------- ----GHALPV AAPGARHCFN bmy_04866T0/1-320 RLLLTERNFA ARFWATRYQW RILALVTAST FPSRCCRVPD THGGPGKPLS ENSBTAP00000007986/1-254 SLL------- ---------- ---------- ----GDALPV ADPGSGHCLN BACU018777/1-245 SFL------- ---------- ---------- ----GYAVPV ADPGSGHCLN ENSTTRP00000003368/1-259 SFL------- ---------- ---------- ----GYAVPV ADPGSGHCLN 301 350 ENSP00000326253/1-261 ---------- ---------I SISAVPRPRP GRRGREAPSR R-----SRSP bmy_04866T0/1-320 GAPAALAPGS WTLRAAEVAV EVEAAPRGRL ALNGRCAPSP HLRPRPSRHP ENSBTAP00000007986/1-254 ---------- ---------I SVSMLPRPRR ARRSRGTVFP R-----SRRS BACU018777/1-245 ---------- ---------I SISVLQHPRH ARRARETTFR R-----SRRP ENSTTRP00000003368/1-259 ---------- ---------I STSVLPRPRH ARRARETTFR R-----SRRP 351 400 ENSP00000326253/1-261 RTSILDAAGS GSGS------ GSGSGP---- --- bmy_04866T0/1-320 ESHHCPSLPS SFQSPILPLC GPRDSPLFRL FEK ENSBTAP00000007986/1-254 RTGILDSASS GSGS------ GSGSGP---- --- BACU018777/1-245 RTWILDAASS GSGS------ GSGSGP---- --- ENSTTRP00000003368/1-259 RTWILDAASS GSGS------ GSGSGP---- ---