KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:33:43 2014 Check: 00 .. Name: ENSP00000369312/1-267 Len: 290 Check: 5974 Weight: 1.00 Name: ENSBTAP00000007987/1-188 Len: 290 Check: 118 Weight: 1.00 Name: bmy_00647T0/1-199 Len: 290 Check: 3443 Weight: 1.00 Name: ENSTTRP00000001261/1-268 Len: 290 Check: 9806 Weight: 1.00 // 1 50 ENSP00000369312/1-267 ---------- ------MAPR RARGCRTLGL P-ALLLLLLL RPP--ATRGI ENSBTAP00000007987/1-188 ---------- -------THC RGKGHRTLGL S-EVIKYAFI KML--ASVGI bmy_00647T0/1-199 MDKTWAEDQS LVQKARVLDR GGPVHREQWF PRSKLKSLHL SPLICTSAGI ENSTTRP00000001261/1-268 ---------- ------EVSR RLRGCGVGAL P--ALLLLLL GPP--ATPGI 51 100 ENSP00000369312/1-267 TCPPPMSVEH ADIWVKSYSL YSRERYICNS GFKRKAGTSS LTECVLNKAT ENSBTAP00000007987/1-188 TCPTPTSVEH ADIQVKSYSI NSRERYVCNS GFKRKAGTSS LTQCVFNETA bmy_00647T0/1-199 TCPAPTSVKH ADIRVKSYNL NSRERYVCNS GFKRKAGTSS LTECVFNQTV ENSTTRP00000001261/1-268 TCPTPTSVKH ADIWVKSYNL NSRERYVCNS GFKRKAGTSS LTECVFNKTV 101 150 ENSP00000369312/1-267 NVAHWTTPSL KCIRDPALVH QRPAPPSTVT TAGVTPQPES LSPSGKEPAA ENSBTAP00000007987/1-188 KVAHWTTPNL KCIRDPSLSH QR--PPSTAA PTGLTPEPES PTPSGKEPDL bmy_00647T0/1-199 NIAHWTTPNL KCIRDPSLTH QT--PPSTAA PTGVTPEPDS PNPSGK---- ENSTTRP00000001261/1-268 NIAHWTTPNL KCIRDPSLTH QR--PPSTAA PTGVTPEPDS PNPSGKXXXX 151 200 ENSP00000369312/1-267 SSPSSNNTAA TTAAIVPGSQ LMPSKSPSTG TTEISSHESS HGTPSQTTAK ENSBTAP00000007987/1-188 TSK------- ---------- ---------- ---------- ---------- bmy_00647T0/1-199 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000001261/1-268 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX 201 250 ENSP00000369312/1-267 NWELTASASH QPPGVYPQGH SDTTVAISTS TVLLCGLSAV SLLA---CYL ENSBTAP00000007987/1-188 ---------- ---SDTKVAT RPATGPGSRL PSTAPPVGTT GVVSKETTYV bmy_00647T0/1-199 ---------- ---GAFQYNP RAVTAAISTS VAVLCGV--- ---------- ENSTTRP00000001261/1-268 XXXXXXXXXX XXPGAYQYNP RAVTAAISTS VAVLCGVCVV CLLVRYVRYI 251 300 ENSP00000369312/1-267 KSRQTPPLAS VEMEAMEALP VTWGTSSRDE DLENCSHHL- ENSBTAP00000007987/1-188 PAQTAAKAPE HTYPALQDTP ---------- ---------- bmy_00647T0/1-199 ---QAYQIPS VEMESMEVVP MTGGTDARGE GTEN------ ENSTTRP00000001261/1-268 RSRQAYQIPS VEMESMEVVP RTGGTDARGE GTENEPHDLG