KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:33:46 2014 Check: 00 .. Name: ENSP00000222219/1-360 Len: 372 Check: 6979 Weight: 1.00 Name: ENSBTAP00000007993/1-365 Len: 372 Check: 8472 Weight: 1.00 Name: ENSTTRP00000003370/1-361 Len: 372 Check: 1827 Weight: 1.00 Name: bmy_04864T0/1-351 Len: 372 Check: 9843 Weight: 1.00 Name: BACU003986/1-351 Len: 372 Check: 9720 Weight: 1.00 // 1 50 ENSP00000222219/1-360 ---MIPLLLA ALLCVPAGAL TCYGDSGQPV DWFVVYKLPA LRGSGEAAQR ENSBTAP00000007993/1-365 MATLSSLLLT ALLWVPVGTL TCYGDSGQPV DWFVVYKLPA HTGSGDATQN ENSTTRP00000003370/1-361 ---LSLLLSA ALLWVPVGTL TCYGDSGQPV DWFVVYKLPA HTGPGDAAQR bmy_04864T0/1-351 MAALSLLLLA ALLWVPVGTL TCYGDSGQPV DWFVVYKLPA HSGPGDAAQR BACU003986/1-351 MAALSLLLLA ALLWVPVGTL TCYGDSGQPV DWFVVYKLPA HSGPGDAAQR 51 100 ENSP00000222219/1-360 GLQYKYLDES SGGWRDGRAL INSPEGAVGR SLQPLYRSNT SQLAFLLYND ENSBTAP00000007993/1-365 GLRYKYFDEH SEDWSDGVGF INSTTGAVGR SLLPLYRNNN SQLAFVLYND ENSTTRP00000003370/1-361 GLRYKYLDED SGGWRDGAGL ISSSTGAVGR SLLPLYRNTT SQLAFLLYND bmy_04864T0/1-351 GLRYKYLDED SGGWRDGAGL ISSPTGAVGR SLLPLYRNTT SQLAFLLYND BACU003986/1-351 GLRYKYLDED SGGWRDGAGL ISSPTGAVGR SLLPLYRNTT SQLAFLLYND 101 150 ENSP00000222219/1-360 QPPQPSKAQD SSMRGHTKGV LLLDHDGGFW LVHSVPNFPP PASSAAYSWP ENSBTAP00000007993/1-365 QPPKSSESKD SSSRGHTKGV LLLDQEGGFW LIHSVPNFPP RASSAVYSWP ENSTTRP00000003370/1-361 QPPRPSGSQD SSSRGHTKGV LLLDQEGGFW LIHSVPNFPP PASSAAYSWP bmy_04864T0/1-351 QPPQSSGSQD SSSRGHTKGV LLLDQEGGFW LIHSVPNFPP PASSAAYSWP BACU003986/1-351 QPPQSSGSQD SSSRGHTKGV LLLDQEGGFW LIHSVPNFPP PASSAAYSWP 151 200 ENSP00000222219/1-360 HSACTYGQTL LCVSFPFAQF SKMGKQLTYT YPWVYNYQLE GIFAQEFPDL ENSBTAP00000007993/1-365 PGAQKYGQTL ICVSFPLTQF LDISKQLTYT YPLVYDHRLE GDFAQKFPYL ENSTTRP00000003370/1-361 PSARNYGQTL ICVSFPLTQF LDISRQLTYT YPLVYDHRLE GDFAQKFPHL bmy_04864T0/1-351 PSAQNYGQTL ICVSFPLTQF LNISRQLTYT YPLVYDHRLE GDFAQKF-HL BACU003986/1-351 PSAQNYGQTL ICVSFPLTQF LNIGRQLTYT YPLVYDHRLE GDFAQKF-HL 201 250 ENSP00000222219/1-360 ENVVKGHHVS QEPWNSSITL TSQAGAVFQS FAKFSKFGDD LYSGWLAAAL ENSBTAP00000007993/1-365 EEVVKGHHVR QGPWNSSVTL TSKKGATFQS FAKFGNFGDD LYSGWLAEAL ENSTTRP00000003370/1-361 EEVVKGHHVR QGPWNSSVTL TSNKGHVFQS FAKFGNFGDD LYSGWLVEAL bmy_04864T0/1-351 EEVVKGHHVR QGPWNSSVTL TSNKGHMFQS FAKFGNFGDD LYSGWLVEAL BACU003986/1-351 EEVVKGHHVR QGPWNSTVTL TSNKGHMFQS FAKFGNFGDD LYSGWLVEAL 251 300 ENSP00000222219/1-360 GTNLQVQFWH KTVGILPSNC SDIWQVLNVN QIAFPGPAGP SFNSTEDHSK ENSBTAP00000007993/1-365 GSTLQVQFWQ RSSGILPSNC SGAQHVFDVT QTAFPGPAGP AFNATEDHSK ENSTTRP00000003370/1-361 GSDLQVQFWQ RSSGILPSNC SGVQHVLDVT QTAFPGLAGP AFNATEDHSK bmy_04864T0/1-351 GSDLQVQFWQ RSSGILPSNC SGVQHVLDVT QTAFPGLAGP TFNATEDHSK BACU003986/1-351 GSDLQVQFWQ RSPGILPSNC SGVQHVLDVT QTAFPGLAGP TFNATEDHSK 301 350 ENSP00000222219/1-360 WCVSPKGPWT CVGDMNRNQG EEQRGGGTLC AQLPALWKAF QPLVKNYQPC ENSBTAP00000007993/1-365 WCVTPKGPWA CVGDMNRNQR EEHRGGGTLC AQM--LWKAF KPLVKAWEPC ENSTTRP00000003370/1-361 WCVAPERPWA CVGDMNRNKR EEHRGGGTLC AQLPALWKAF QPLVKAWEPC bmy_04864T0/1-351 WCVAPERPWA CVGDMNRNKR EEHRGGGTLC AQLPALWKAF QPLVKAWKPC BACU003986/1-351 WCVAPERPWA CVGDMNRNKR EEHRGGGTLC AQLPALWKAF QPLVKAWEPC 351 400 ENSP00000222219/1-360 NG-MARKPSR AYKI------ -- ENSBTAP00000007993/1-365 EK-----KSR AYSLGSPAGL WT ENSTTRP00000003370/1-361 GKSRARKPSR AYKS------ -- bmy_04864T0/1-351 GK-------- ---------- -- BACU003986/1-351 GK-------- ---------- --