KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:33:47 2014 Check: 00 .. Name: ENSP00000384832/1-207 Len: 216 Check: 5537 Weight: 1.00 Name: ENSBTAP00000008000/1-183 Len: 216 Check: 4910 Weight: 1.00 Name: bmy_10999T0/1-215 Len: 216 Check: 8947 Weight: 1.00 Name: ENSTTRP00000004924/1-206 Len: 216 Check: 2464 Weight: 1.00 Name: BACU018991/1-206 Len: 216 Check: 2380 Weight: 1.00 // 1 50 ENSP00000384832/1-207 MGGRGADAGS SGGTGPTEGY SPPAASTRAA ARAKARGGGR GGRRNTTPSV ENSBTAP00000008000/1-183 MGGRGADAGS SGGTGPPEGY SAPAASARAA SRAKARGGGR GGRRNTTPSV bmy_10999T0/1-215 MGGRGADAGS RGGTGPTEGY SPPAASTGAA VRAKARGCGR GGRRNTTPSV ENSTTRP00000004924/1-206 MGGRGSDAGS RGGTGPTEGY SSPAASTGAA VRAKARGCGR GGRRNTTPSV BACU018991/1-206 MGGRGADAGS RGGTGPTEGY SPPAASTGAA VRPKARGCGR GGRRNTTPSV 51 100 ENSP00000384832/1-207 PSLRGAAPRS FHPPAAMSER LRPRKRRRNG NEEDNHLPPQ TKRSSRNPVF ENSBTAP00000008000/1-183 PSPRGAAPRR SSPSAAMSER LRPRKRRRNG SEEDHHLPPQ TKRSSRNPVF bmy_10999T0/1-215 LSLRGAAPRR SPPSANMSER LRPRKRRRNG SEEDHHLPPQ TKRSSRNPVF ENSTTRP00000004924/1-206 FSLRGAAPRR SPPSANMSER LRPRKRRRNG SEEDHHLPPQ TKRSSRNPVF BACU018991/1-206 LSLRGAAPRR SPPSVNMSER LRPRKRRRNG SEEDHHLPPQ TKRSSRNPVF 101 150 ENSP00000384832/1-207 QDSWDTETVP VMRNSKEN-- --RLRGN--- --KAFCASSG SDSGGSSSSS ENSBTAP00000008000/1-183 HDSWDTE--- ---------- ---------- -------SSS SDSGG-S--S bmy_10999T0/1-215 HDSWDTENSP FSPKCDNIGK YWEIRHEVFE LFRTVPQSSS SDSGG-SSGS ENSTTRP00000004924/1-206 HDSWDTETVP VTRNRKEN-- --RLRGD--- --RVLCASSS SDSGG-SSGS BACU018991/1-206 HDSWDTETVP VMRNSKDN-- --RLRGD--- --RVLCESSS SDSGG-SSGS 151 200 ENSP00000384832/1-207 SSSINSPDRA SGPEGSLSQT MAGSSPNTPQ PVPEQSALCQ GLYFHINQTL ENSBTAP00000008000/1-183 SSSISSPDRA SGPESSLHHL AAGPGPHTPQ PAPEPSALCQ GPYFHINQTL bmy_10999T0/1-215 SSSINSPDRA SGPESSSSHP ATRSSPHGPQ PAPAPSALCQ SPYFHINQTL ENSTTRP00000004924/1-206 SSSINSPDRA SAPESGSSHP TARSSPHGPQ PAPVPSALCQ SPYFHINQTL BACU018991/1-206 GSSINSPDRA SGPESSSSHP AARSSPHGPQ PAPAPSALCQ SPYFHINQTL 201 250 ENSP00000384832/1-207 REAHFHSLQH RGRPLT ENSBTAP00000008000/1-183 KEAHFHSLQH RGRPPS bmy_10999T0/1-215 KEAHFHSLQH RGRPPT ENSTTRP00000004924/1-206 KEAHFHSLQH RGRPPT BACU018991/1-206 KEAHFHSLQH RGRPPT