KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:33:48 2014 Check: 00 .. Name: ENSP00000357883/1-562 Len: 616 Check: 5982 Weight: 1.00 Name: ENSTTRP00000006637/1-553 Len: 616 Check: 6546 Weight: 1.00 Name: bmy_11121T0/1-603 Len: 616 Check: 1970 Weight: 1.00 Name: ENSBTAP00000008015/1-549 Len: 616 Check: 2234 Weight: 1.00 // 1 50 ENSP00000357883/1-562 MASASSGPSS SVGFSSFDPA VPSCTLSSA- ---------- -ASGIKRPMA ENSTTRP00000006637/1-553 -MAASSGS-S VSGFGV---- --SCSSQS-- ---------- -ASGIKRPMA bmy_11121T0/1-603 MASASSGS-S AVGFSSADSG VPPCTSSSGF NFLCCGVSRK RASGIKRPMA ENSBTAP00000008015/1-549 MASASSGP-S AVGFSSADSS VPPCTSAS-- ---------- -ASGIKRPTA 51 100 ENSP00000357883/1-562 SEVLEARQDS YISLVPYASG MPIKKIGHRS VDSSGETTYK KTTSSALKGA ENSTTRP00000006637/1-553 SEVLESR-GS HISLVPYASS MPMKKIGHRG VDSSGETTYK KTTSSALKGA bmy_11121T0/1-603 SEV------- -----PYASS MSMKKIGHRG VDSSGETTYK KTTSSALKGA ENSBTAP00000008015/1-549 SEV------- -----PYSSG MSMKKIGHRG VDSSGETTYK KTTSSALKGA 101 150 ENSP00000357883/1-562 IQLGITHTVG SLSTKPERDV LMQDFYVVES IFFPSEGSNL TPAHHYNDFR ENSTTRP00000006637/1-553 IQLGITHTVG SLSTKPERDV LMQDFYVVES IFFPSEGSNL TPAHHYNDFR bmy_11121T0/1-603 IQLGITHTVG SLSTKPERDV LMQDFYVVES IFFPSEGSNL TPAHHYNDFR ENSBTAP00000008015/1-549 IQLGITHTVG SLSTKPERDV LMQDFYVVES IFFPSEGSNL TPAHHYNDFR 151 200 ENSP00000357883/1-562 FKTYAPVAFR YFRELFGIRP DDYLYSLCSE PLIELCSSGA SGSLFYVSSD ENSTTRP00000006637/1-553 FKTYAPVAFR YFRELFGIRP DDYLYSLCNE PLIELCNSGA SGSLFYVSSD bmy_11121T0/1-603 FKTYAPVAFR YFRELFGIRP DDYLYSLCNE PLIELCNSGA SGSLFYVSSD ENSBTAP00000008015/1-549 FKTYAPVAFR YFRELFGIRP DDYLYSLCNE PLIELCNSGA SGSLFYVSSD 201 250 ENSP00000357883/1-562 DEFIIKTVQH KEAEFLQKLL PGYYMNLNQN PRTLLPKFYG LYCVQAGGKN ENSTTRP00000006637/1-553 DEFIIKTVQH KEAEFLQKLL PGYYMNLNQN PRTLLPKFYG LYCVQAGGKN bmy_11121T0/1-603 DEFIIKTVQH KEAEFLQKLL PGYYMNLNQN PRTLLPKFYG LYCVQAGGKN ENSBTAP00000008015/1-549 DEFIIKTVQH KEAEFLQKLL PGYYMNLNQN PRTLLPKFYG LYCVQAGGKN 251 300 ENSP00000357883/1-562 IRIVVMNNLL PRSVKMHIKY DLKGSTYKRR ASQKEREKPL PTFKDLDFLQ ENSTTRP00000006637/1-553 IRIVVMNNLL PRSVKMHIKY DLKGSTYKRR ASQKEREKPL PTLKDLDFLQ bmy_11121T0/1-603 IRIVVMNNLL PRSVKMHIKY DLKGSTYKRR ASQKERDKPL PTLKDLDFLQ ENSBTAP00000008015/1-549 IRIVVMNNLL PRSVKMHIKY DLKGSTYKRR ASQKEREKPL PTLKDLDFLQ 301 350 ENSP00000357883/1-562 DIPDGLFLDA DMYNALCKTL QRDCLVLQSF KIMDYSLLMS IHNIDHAQRE ENSTTRP00000006637/1-553 DIPDGLFLDA DMYNALCKTL QRDCLVLQSF KIMDYSLLVS IHNIDYAQRE bmy_11121T0/1-603 DIPDGLFLDA DMYNALCKTL QRDCLVLQSF KIMDYSLLVS IHNIDHAQRE ENSBTAP00000008015/1-549 DIPDGLFLDA DMYNALCKTL QRDCLVLQSF KIMDYSLLVS IHNIDHAQRE 351 400 ENSP00000357883/1-562 PLSSETQYSV DTRRPAPQKA LYSTAMESIQ GEARRGGTME TDDHMGGIPA ENSTTRP00000006637/1-553 PLGNEAQYST DTRRPAPQKA LYSTAMESIQ GEARRGGTME TEDHMGGIPA bmy_11121T0/1-603 PLGNEAQYST DTRRPAPQKA LYSTAMESIQ GEARRGGTME TDDHMGGIPA ENSBTAP00000008015/1-549 PLGSEAQYSA DTRRPAPQKA LYSTAMESIQ GEARRGGTME TDDHMGGIPA 401 450 ENSP00000357883/1-562 RNSKGERLLL YIGIIDILQS YRFVKKLEHS WKALVHDGDT VSVHRPGFYA ENSTTRP00000006637/1-553 RNSKGERLLL YIGIIDILQS YRFVKKLEHS WKALVHDGDT VSVHRPSFYA bmy_11121T0/1-603 RNSKGERLLL YIGIIDILQS YRFVKKLEHS WKALVHDGDT VSVHRPSFYA ENSBTAP00000008015/1-549 RNSKGERLLL YIGIIDILQS YRFIKKLEHS WKALVHDGDT VSVHRPSFYA 451 500 ENSP00000357883/1-562 ERFQRFMCNT VFKKIPLKPS PSKKFRSGSS FSRRAGSSGN SCITYQPSVS ENSTTRP00000006637/1-553 ERFQRFMCTT VFKKILLKPS PSKKFRSGSS FSRRAGPSGN SCVTYQPSVS bmy_11121T0/1-603 ERFQRFMCTT VFKKIPLKPS PSKKFRSGSS FSRRAGPSGN SCVTYQPSVS ENSBTAP00000008015/1-549 ERFQRFMCTT VFKKIPLKSS PSKKFRSGSS FSRRAGPSGN SCVTYQPSVS 501 550 ENSP00000357883/1-562 GEHKAQVTTK AEVEPGVHLG RPDVLPQTPP LEEISEGSPI PDPSFSPLVG ENSTTRP00000006637/1-553 GEHKAQVTTK AEVEPGVHFG RPDVLPQTPP LEKISEVSTI PDPYFSPVVG bmy_11121T0/1-603 GEHKAQVTTK AEVEPGVHFG RPDVLPQTPP LEKISEVSTI PDPYFSPVVG ENSBTAP00000008015/1-549 GEHKAQVTTK AEVEPGVHLG RPDVLPQTPP LEKISEVSTI PDPYFSPVVG 551 600 ENSP00000357883/1-562 ETLQMLTTST T-LEKLEVAE SEFTH----- ---------- ---------- ENSTTRP00000006637/1-553 ETLQMLTTSS TLLEKHEVPE SEFIH----- ---------- ---------- bmy_11121T0/1-603 ETLQMLTTSS TLLEKHEVPE SEFIHVSVWD VGEVDALEGE QKSSEDLEQD ENSBTAP00000008015/1-549 ETLQTLTTSS TLLEKHEVPE SEFIH----- ---------- ---------- 601 650 ENSP00000357883/1-562 ---------- ------ ENSTTRP00000006637/1-553 ---------- ------ bmy_11121T0/1-603 STISAIPRCQ PLTQQC ENSBTAP00000008015/1-549 ---------- ------