KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:33:49 2014 Check: 00 .. Name: ENSTTRP00000006384/1-609 Len: 615 Check: 2846 Weight: 1.00 Name: ENSP00000352257/1-609 Len: 615 Check: 4586 Weight: 1.00 Name: ENSBTAP00000008020/1-612 Len: 615 Check: 9800 Weight: 1.00 Name: bmy_01008T0/1-583 Len: 615 Check: 6617 Weight: 1.00 Name: BACU013415/1-608 Len: 615 Check: 5666 Weight: 1.00 // 1 50 ENSTTRP00000006384/1-609 -----MSGWE SYYKNQGDEE -EEDQEEGLE EGGDYKYSGR DSLIFLIDAS ENSP00000352257/1-609 -----MSGWE SYYKTEGDEE AEEEQEENLE ASGDYKYSGR DSLIFLVDAS ENSBTAP00000008020/1-612 MSSNNMSGWE SYYKNEGDE- -EEEQEEGLE AGGDYSYSGR DSLIFLVDAS bmy_01008T0/1-583 -----MSGWE SYYKNQGDEE -EEDQEEGLE AGGDYKYSGR DSLIFLIDAS BACU013415/1-608 -----MSGWE SYYKNQGDEE -EEDQEEGLE A-GDYKYSGR DSLIFLIDAS 51 100 ENSTTRP00000006384/1-609 EAMFETQDED ELTPFDMSIQ CIRSVYTSKI ISSDRDLLAV VFYGTKKDKN ENSP00000352257/1-609 KAMFESQSED ELTPFDMSIQ CIQSVYISKI ISSDRDLLAV VFYGTEKDKN ENSBTAP00000008020/1-612 RAMFESQDED ELTPFDMSIQ CIRSVYTNKI ISSNRDLLAV VFYGTKKDKN bmy_01008T0/1-583 EAMFETQDED ELTPFDMSIQ ---------I ISSDRDLLAV VFYGTKKDKN BACU013415/1-608 EAMFETQDED ELTPFDMSIQ CIRSVYTSKI ISSDRDLLAV VFYGTKKDKN 101 150 ENSTTRP00000006384/1-609 SVNFKNIYVL QELDNPGAKR VLELDRFKGQ EGKKHFQDLI GHGSDYSLSE ENSP00000352257/1-609 SVNFKNIYVL QELDNPGAKR ILELDQFKGQ QGQKRFQDMM GHGSDYSLSE ENSBTAP00000008020/1-612 SVNFKNIYVL QELDNPGVKR VQELDKFKGQ EGKKYFEDQI GHGSDYSLSE bmy_01008T0/1-583 SVNFKNIYVL QELDNPGAKR VLELDHFKGQ EGKKHFQDLI GHGSDYSLSE BACU013415/1-608 SVNFKNIYVL QELDNPGAKR LLELDHFKGQ EGKKHFQDLV GHGSDYSLSE 151 200 ENSTTRP00000006384/1-609 VLWVCANLFS DVQFKMSHKR IMLFTNEDDP HGNDSAKASR ARTKAGDLRD ENSP00000352257/1-609 VLWVCANLFS DVQFKMSHKR IMLFTNEDNP HGNDSAKASR ARTKAGDLRD ENSBTAP00000008020/1-612 VLWVCANLFS DVQFKMSHKR IMLFTNEDDP HGDDSAKASR ARTKAGDLRD bmy_01008T0/1-583 VLWVCANLFS DVQFKMSHKR IMLFTNEDDP HGNDS----- ---------- BACU013415/1-608 VLWVCANLFS DVQFKMSHKR VMLFTNEDDP HGNDSAKASR ARTKAGDLHD 201 250 ENSTTRP00000006384/1-609 TGIFLDLLHL RKRGGFDISL FYRDIISIAE DEDIGVHFEE SSKLEDLSRK ENSP00000352257/1-609 TGIFLDLMHL KKPGGFDISL FYRDIISIAE DEDLRVHFEE SSKLEDLLRK ENSBTAP00000008020/1-612 TGIFLDLMHL KKRGGFDTSL FYRDVI-IAE NEDIGIHFEE SSKLEDLLRK bmy_01008T0/1-583 --IFLDLLHL KKRGGFDISL FYRDIISIAE DEDIGVHFEE SSKLKDLLRK BACU013415/1-608 TGIFLDLLHL KKRGGFDISL FYRDIISIAE DEDIGVHFEE SSKLKDLLRK 251 300 ENSTTRP00000006384/1-609 VRAKETRKRV LCRLKLKLNK DVALTVGIYN MVQKALKPSP VRLYRETNEP ENSP00000352257/1-609 VRAKETRKRA LSRLKLKLNK DIVISVGIYN LVQKALKPPP IKLYRETNEP ENSBTAP00000008020/1-612 VRAKETRKRV LSRLKLKLNK DVTLTVGIYN MVQKAYRPPP VRLYRETNEP bmy_01008T0/1-583 VRAKETRKRV LCRLKLKLNK DVALTVGIYN MVQKALKPSP VRLYRXTNEP BACU013415/1-608 VRAKETRKRV LHRLKLKLDK DVALTVGIYN MVQKALKPSP VRLYRETNEP 301 350 ENSTTRP00000006384/1-609 VKTKTRTFNV NTGSLLLPSD TKRSQXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000352257/1-609 VKTKTRTFNT STGGLLLPSD TKRSQIYGSR QIILEKEETE ELKRFDDPGL ENSBTAP00000008020/1-612 VKTKTRTFNV NTGSLLLPSD TKRSQTYSHR QIVLEKEETE ELKRFDEPGF bmy_01008T0/1-583 VKTKTRTFNV NTGSLLLPSD TKRSQTYGSR QIVLEKEETE ELKRFDEPGL BACU013415/1-608 VKTKTRTFNV NTGSLLLPSD TKRSQTYGSR QIVLEKKETE ELKRFDEPGL 351 400 ENSTTRP00000006384/1-609 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXSSTLFSAL LTKCLEKEVM ENSP00000352257/1-609 MLMGFKPLVL LKKHHYLRPS LFVYPEESLV IGSSTLFSAL LIKCLEKEVA ENSBTAP00000008020/1-612 ILIGFKPLMM LKKHHYLRHS LFVYPEESLI NGSSTLFSAL LTKCLEKEVM bmy_01008T0/1-583 ILIGFKPLIM LKKHHYLRPS LFVYPEESLI NGSSTLFSAL LTKCLEKEVM BACU013415/1-608 LLIGFKTLIM LKKHHYLRPS LFVYPDESLI NGSSTLFSAL LTKCLEKEVM 401 450 ENSTTRP00000006384/1-609 AVCRYTPRQN VPPCFVALMP QEEELDDQKI QVTPPXXXXX XXXXXXXXXX ENSP00000352257/1-609 ALCRYTPRRN IPPYFVALVP QEEELDDQKI QVTPPGFQLV FLPFADDKRK ENSBTAP00000008020/1-612 AVCRYTPRRN SPPCFVALVP QEEELDDQKI QVAPPGFQLV FLPYADDKRK bmy_01008T0/1-583 AVCRYTPXQN IPPCFVALMP QEEELDDQKI QVTPPGFQLI FLPYADDKRK BACU013415/1-608 AVCRYTPRQN IPPCFVALMP QEEELDDQKI QVTPPGFQLI FLPYADDKRK 451 500 ENSTTRP00000006384/1-609 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXS GSFENPVLQQ HFRNMEALAL ENSP00000352257/1-609 MPFTEKIMAT PEQVGKMKAI VEKLRFTYRS DSFENPVLQQ HFRNLEALAL ENSBTAP00000008020/1-612 VPFTEKVMAN PEQVDKMKAI VQKLRFKYRS DSFENPVLQQ HFRNMEALAL bmy_01008T0/1-583 VPFTEKVMAN PEQVDKMKAI VQKLRFKYRS DSFENPVLQQ YFRNMEALAL BACU013415/1-608 VPFTEKVMAN PEQVDKMKAI VQKLRFKYRS DSFENPVLQQ HFRNMEALAL 501 550 ENSTTRP00000006384/1-609 DLMEPEQAVD LTLPKVEVMD RRLGSLVDEF KELVYPPDYN PEEKVPKRKQ ENSP00000352257/1-609 DLMEPEQAVD LTLPKVEAMN KRLGSLVDEF KELVYPPDYN PEGKVTKRKH ENSBTAP00000008020/1-612 DLMEPEQAVD LTLPKTEVMD KRLGSLVDEF KELVYPPDYN PEGKVTKRKK bmy_01008T0/1-583 DLMEPEQAVD LTLPKVEVMD KRLGSLVDEF KELVYPPGYN PEEKVSKRKQ BACU013415/1-608 DLMEPEQAVD LTLPKVEVMD KRLGSLVDEF KELVYPPDYN PEEKVPKRKQ 551 600 ENSTTRP00000006384/1-609 GDENSGSKRP KVELSEEELK AHVSKGTLGK LTVPTLKEAC RVYGLKSGTK ENSP00000352257/1-609 DNEGSGSKRP KVEYSEEELK THISKGTLGK FTVPMLKEAC RAYGLKSGLK ENSBTAP00000008020/1-612 DDESYGSKRP KVELSEEELK AHVSKGTLGK LTVPALKEAC RMYGLKGGLK bmy_01008T0/1-583 GDENSGSKRP KVELSEEELK AHVSKGTLGK LTVPTLKEAC RVYGLKSGTK BACU013415/1-608 GDENSGSKRP KVELSEEELK AHVSRGTLGK LTVPTLKEAC RVYGLKSGMK 601 650 ENSTTRP00000006384/1-609 KQELLDALTK RFQKA ENSP00000352257/1-609 KQELLEALTK HFQD- ENSBTAP00000008020/1-612 KQELLDVLTE HFQKA bmy_01008T0/1-583 KQELLDALTK RFQKA BACU013415/1-608 KQELLDALTK RFQKA