KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:33:50 2014 Check: 00 .. Name: ENSP00000215743/1-488 Len: 488 Check: 6396 Weight: 1.00 Name: ENSBTAP00000008025/1-452 Len: 488 Check: 6753 Weight: 1.00 Name: ENSTTRP00000001923/1-488 Len: 488 Check: 247 Weight: 1.00 Name: bmy_19805T0/1-442 Len: 488 Check: 7133 Weight: 1.00 Name: BACU017146/1-411 Len: 488 Check: 6414 Weight: 1.00 // 1 50 ENSP00000215743/1-488 MAPAAWLRSA AARALLPPML LLLLQPPPLL ARALPPDAHH LHAERRGPQP ENSBTAP00000008025/1-452 ---------- ---------- ---------- ------DAPR RHPVSRGPQP ENSTTRP00000001923/1-488 MAWAARIRGA APRTLLLPLL LLLLPPPPLA RAPRSPDAHR RHPVRRGPQP bmy_19805T0/1-442 ---------- ---------- -----MLPWK HSRPLKDAYR RHPVRRGPQP BACU017146/1-411 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000215743/1-488 WHAALPSSPA PAPATQEAPR PASSLRPPRC GVPDPSDGLS ARNRQKRFVL ENSBTAP00000008025/1-452 WPDAPPDSDA PALATQEALP LAGRPRPPRC GVPDLPDGPS ARNRQKRFVL ENSTTRP00000001923/1-488 WREAPPSSPA SAPTAQEAPQ PAAGPRPPRC GVPDPLDGPS AHNRQKRFVL bmy_19805T0/1-442 WREAPPSSPA PAPTTQEAPQ PAAGPRPPRC GVPDPPDGPS ARNRQKRFVL BACU017146/1-411 ---------- ---------- -------PRC GVPDPPDGPS ARNRQKRFVL 101 150 ENSP00000215743/1-488 SGGRWEKTDL TYRILRFPWQ LVQEQVRQTM AEALKVWSDV TPLTFTEVHE ENSBTAP00000008025/1-452 SGGRWEKTDL TYRILRFPWQ LLREQVRQTV AEALQVWSDV TPLTFTEVHE ENSTTRP00000001923/1-488 SGGRWEKTDL TYRILRFPWQ LVREQVRQTV AEALQVWSDV TPLTFTEVHE bmy_19805T0/1-442 SGGRWEKTDL TYRILRFPWQ LVREQVRQTV AEALQVWSDV TPLTFTEVHE BACU017146/1-411 SGGRWEKTDL TYRILRFPWQ LVREQVRQTV AEALQVWSDV TPLTFTEVHE 151 200 ENSP00000215743/1-488 GRADIMIDFA RYWHGDDLPF DGPGGILAHA FFPKTHREGD VHFDYDETWT ENSBTAP00000008025/1-452 GRADIVIDFT RYWHGDNLPF DGPGGILAHA FFPKTHREGD VHFDYDETWT ENSTTRP00000001923/1-488 GHADIMIDFT RYWHGDNLPF DGPGGILAHA FFPKTHREGD VHFDYDETWT bmy_19805T0/1-442 GHADIIIDFT RYWHGDNLPF DGPGGILAHA FFPKTHREGD ---------- BACU017146/1-411 GHADIIIDFT RYWHGDNLPF DGPGGILAHA FFPKTHREGD VHFDYDETWT 201 250 ENSP00000215743/1-488 IGDDQGTDLL QVAAHEFGHV LGLQHTTAAK ALMSAFYTFR YPLSLSPDDC ENSBTAP00000008025/1-452 IGDNQGTDLL QVAAHEFGHV LGLQHTTAAK ALMSPFYTFR YPLSLSPDDR ENSTTRP00000001923/1-488 IGDNQGTDLL QVAAHEFGHV LGLQHTTAAK ALMSPFYTFR YPLSLSPDDR bmy_19805T0/1-442 ---------- -VAAHEFGHV LGLQHTTAAK ALMSPFYTFR YPLSLSPDDR BACU017146/1-411 IGDNQGTDLL QVAAHEFGHV LGLQHTTAAK ALMSPFYTFR YPLSLSPDDR 251 300 ENSP00000215743/1-488 RGVQHLYGQP WPTVTSRTPA LGPQAGIDTN EIAPLEPDAP PDACEASFDA ENSBTAP00000008025/1-452 RGIQQLYGRP QLAPTSRPPD LGPGTGADTN EIAPLEPDAP PDACQVSFDA ENSTTRP00000001923/1-488 RGIQHLYGRP RLAPTSRPPD LGPGAGVDTN EIAPLEPDAP PDACQVSFDA bmy_19805T0/1-442 RGIQHLYGRP RLAPTSRPPD LGPGARVDTN EIAPLEPDAP PDACQVSFDA BACU017146/1-411 RGIQHLYGRP RLAPTSRPPD LGPGAGVDTN EIAPLEPDAP PDACQVSFDA 301 350 ENSP00000215743/1-488 VSTIRGELFF FKAGFVWRLR GGQLQPGYPA LASRHWQGLP SPVDAAFEDA ENSBTAP00000008025/1-452 AATIRGELFF FKAGFVWRLR GGRLQPGYPA LASRHWQGLP SPVDAAFEDA ENSTTRP00000001923/1-488 VATIRGELFF FKAGFVWRLR GGQLQPGYPA LASRHWQGLP TSVDAAFEDA bmy_19805T0/1-442 VATIRGELFF FKAGFVWRLR GGRLQPGYPA LASRHWQGLP TSVDAAFEDA BACU017146/1-411 VATIRGELFF FKAGFVWRLR GGRLQPGYPA LASRHWQGLP TSVDAAFEDA 351 400 ENSP00000215743/1-488 QGHIWFFQGA QYWVYDGEKP VLGPAPLTEL GLVRFPVHAA LVWGPEKNKI ENSBTAP00000008025/1-452 QGHIWFFQGA QYWVYDGEKP VLGPAPLSEL GLQGSPIHAA LVWGSEKNKI ENSTTRP00000001923/1-488 QGHIWFFQGA QYWVYDGEKP VLGPAPLSEL GLLGSLVHAA LVWGPEKNKI bmy_19805T0/1-442 QGHIWFFQGA QYWVYDGEKP VLGPAPLSEL GLLGSLVHAA LVWGPEKNKI BACU017146/1-411 QGHIWFFQGA QYWVYDGEKP VLGPAPLSEL GLLGSLVHAA LVWGPEKNKI 401 450 ENSP00000215743/1-488 YFFRGRDYWR FHPSTRRVDS PVPRRATDWR GVPSEIDAAF QDADGYAYFL ENSBTAP00000008025/1-452 YFFRSGDYWR FQPSARRVDS PVPRRVTDWR GVPSEIDAAF QDAEGFAYFL ENSTTRP00000001923/1-488 YFFRGGDYWR FHPSTRRVDS PVPRRATDWR GVPSEIDAAF QDADGYAYFL bmy_19805T0/1-442 YFFRGGDYWR FHPSTRRVDS PVPRRATDWR GVPSEIDAAF QDADGYAYFL BACU017146/1-411 YFFRGGDYWR FHPSTRRVDS PVPRRATDWR GVPSEIDAAF QDADGYAYFL 451 500 ENSP00000215743/1-488 RGRLYWKFDP VKVKALEGFP RLVGPDFFGC AEPANTFL ENSBTAP00000008025/1-452 RGRLYWKFDP VKVKALEGFP RLVGPDFFSC TEAANTFR ENSTTRP00000001923/1-488 RGRLYWKFDP VKVKALEGFP RLVGPDFFGC TEPANTFR bmy_19805T0/1-442 RGRLYWKFDP VKVKALEGFP RLVGPDFFGC TEPANTFR BACU017146/1-411 RGRLYWKFDP VKVKALEGFP RLVGPDFFGC TEPANTFR