KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:33:51 2014 Check: 00 .. Name: ENSP00000265140/1-1058 Len: 1060 Check: 7165 Weight: 1.00 Name: ENSBTAP00000008026/1-1050 Len: 1060 Check: 1993 Weight: 1.00 Name: ENSTTRP00000006297/1-895 Len: 1060 Check: 9845 Weight: 1.00 Name: bmy_19750T0/1-1057 Len: 1060 Check: 7395 Weight: 1.00 Name: BACU017779/1-1057 Len: 1060 Check: 5668 Weight: 1.00 // 1 50 ENSP00000265140/1-1058 MEDGTPKHII QMTGFKMEEK EALVKLLLKL DCTFIKSEKY KNCTHLIAER ENSBTAP00000008026/1-1050 MEDDAPKHII QMTGFKVEEK EALGKLLLKL DCTFIKSEKY KNCTHLIAER ENSTTRP00000006297/1-895 MEDGAPKHII QMTGFKMEEK EALGKLLLKL DCTFIKSEKY KNCTHLIAER bmy_19750T0/1-1057 MEDGAPKHII QMTGFKMEEK EALGKLLLKL DCTFIKSEKY KNCTHLIAER BACU017779/1-1057 MEDGAPKHII QMTGFKMEEK EALGKLLLKL DCTFIKSEKY KNCTHLIAER 51 100 ENSP00000265140/1-1058 LCKSEKFLAA CAAGKWILTK DYIIHSAKSG RWLDETTYEW GYKIEKDSRY ENSBTAP00000008026/1-1050 LCKSEKFLAA CAAGNWFTEK EYKPHS-NCG RWLDETTYEW GYKIEKDSHY ENSTTRP00000006297/1-895 LCKSEKFLAA CAAGKWVLTK DYIIHSAKSG KWLDETTYEW GYKIEKDSHY bmy_19750T0/1-1057 LCKSEKFLAA CAAGKWVLTK DYIIHSAKSG RWLDETTYEW GYKIEKDSHY BACU017779/1-1057 LCKSEKFLAA CAAGKWVLTK DYIIHSAKSG RWLDETTYEW GYKIEKDSHY 101 150 ENSP00000265140/1-1058 SPQMQSAPKR WREELKRTGA PGAFHRWKVV LLVRTDKRSD SLIRVLEAGK ENSBTAP00000008026/1-1050 SPQMQSAPKR WREELKRTGA PGAFHKWKVV LLVRADKRSD SLVRVLEAGK ENSTTRP00000006297/1-895 SPQMQSAPKR WREELKRTGA PGAFHRWKVV LLVRADKRSD SLVXXXXXXX bmy_19750T0/1-1057 SPQMQSAPKR WREELKRTGA PGAFHRWKVV LLVRADKRSD SLVRVLEAGK BACU017779/1-1057 SPQMQSAPKR WREELKRTGA PGAFHRWKVV LLVRADKRSD SLVRVLEAGK 151 200 ENSP00000265140/1-1058 ANVILPKSSP SGITHVIASN ARIKAEKEKD NFKAPFYPIQ YLGDFLLEKE ENSBTAP00000008026/1-1050 ANVILPKNSP TGITHVIASN ARIKAEQEKD DFKAPFYPIQ YLEDFLLEKE ENSTTRP00000006297/1-895 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXKE bmy_19750T0/1-1057 ANVFLPKNSP SEITHVIASN ARIKAEQEKD NFKAPFYPIQ YLGDFLLEKE BACU017779/1-1057 ANVFLPKNSP SEITHVIASN ARIKAEQEKD NFKAPFYPIQ YLGDFLLEKE 201 250 ENSP00000265140/1-1058 IQNDEDSQTN SVWTEHSNEE TNKDFRKDAG FLEMKGALRE TMYRTQKEMQ ENSBTAP00000008026/1-1050 IHNDEDSQTN STWKNHSSQE KSNDFRENMG FLEMKGTLKE TMCRTQKEMK ENSTTRP00000006297/1-895 IQNDEDSQTS SVWNNHSNQE KNKDFRKDMG FLEMKGALKE IMCRTQKEVK bmy_19750T0/1-1057 IQNDEDSQTS SVWNNHSNQE KNKDFRKDMG FLEMKGALKE MMCRTQKEVK BACU017779/1-1057 IQNDEDSQTS SVWSNHSNQE KNKDFRKDMG FLEMKGALKE MMCRTQKEVK 251 300 ENSP00000265140/1-1058 NH-EDVNVGS ILIQHHKKEK FSGSSKDLKF VKMRNTFGSH TYENQKEIKK ENSBTAP00000008026/1-1050 NHDEDVTISS ILTEHQSKER FRDSRKNLKF VKMRNALGRH TYRNQ-EMKK ENSTTRP00000006297/1-895 NHDEDVNISS ILTEHHRKEK YRDSSKDLKF VKMRNALGRH TYGNQKGIKK bmy_19750T0/1-1057 NHDEDVNVRS ILTEHHRKEK YRDSSKDLKF VKMRNXLGRH TYGNQKEIKK BACU017779/1-1057 NHDEDVNVHS ILTEHHRKEK YRDSSKDLKF VKMRNALGRH TYGNQKEIKK 301 350 ENSP00000265140/1-1058 KDEDIQRSYT LRRKRKKGKE SNCKKGVEHE KIKSTLRRHI YNRDQKEMKN ENSBTAP00000008026/1-1050 KDEDIQSIYT LRKKRKKEKE RDSRKDIEHD --RSTLRKHI Y-RDQKERKN ENSTTRP00000006297/1-895 KDEDIQRNYT LRKKHKREKE RDSRKDNEHD --KITVRKHI Y-RDQKEMKN bmy_19750T0/1-1057 EDEDIQRNYT LRKKRKKEKE RDSRKDNEHD --KSTLRKHV Y-RDQKEMKN BACU017779/1-1057 EDEDIQRNYT LRKKRKKEKE RDSRKDTEHD --KSTLRKHV Y-RDQKEMKN 351 400 ENSP00000265140/1-1058 SIFAEYAKES KAMAIKTDVD VVEIKNTLRK HIYRAQAVRY NCIRIDKQPV ENSBTAP00000008026/1-1050 SVFAGHAKES KTKDIRTNVD IVDLKNALRK HIYRAQAVRY RGIRIDKQPA ENSTTRP00000006297/1-895 SVFADHAKES KTKDIRTDVD IADIKNALRK HIYRAQAIRY SCIRIDKQPA bmy_19750T0/1-1057 SVFADHAKES KTKDIRTDVD IAXIKNALRK HVYRAQAIRY SCIRIDKQPV BACU017779/1-1057 SVFADHAKES KTKDIRTDVD IADIKNALRK HIYRAQAIRY SCIRIDKQPV 401 450 ENSP00000265140/1-1058 YNVEVKNAEF PRGVLNLIES LIEGHFFKEA IEELSTLQAH YIPPVCVLHA ENSBTAP00000008026/1-1050 YNVEVKNAEF PRGILNLIES LIEGQFFKEA IEELSSLQAH YIPPVYLLHA ENSTTRP00000006297/1-895 YNVEVKNAEF PRGVLNLIES LIEGQFFKEA IEELSSLQSH YIPPVCLLHA bmy_19750T0/1-1057 YNVEVKNAEF PRGVLNLIES LIEGQFFKEA IEELSSLQSH YIPPVCLLHA BACU017779/1-1057 YNVEVKNAEF PRGVLNLIES LIEGQFFKEA IEELSSLQSH YIPPVCLLHA 451 500 ENSP00000265140/1-1058 LLENVLQDNI DTFSGRYFHI LSALLHLHPP WKSPAMSRYY LELFQCPTCM ENSBTAP00000008026/1-1050 LLENILQDNI DTFSGRYFHK MSALLHLHPP WKSPAISVYL IALL----CL ENSTTRP00000006297/1-895 LLENILQDNI DTFSGRYFHI LSALLHLHPP WKSPAMSRYY LELFQCPTCM bmy_19750T0/1-1057 LLENILQDNI DTFSGRYFDI LSALLHLHPP WKSPAMSRYY LELFQCPTCM BACU017779/1-1057 LLENILQDNI DTFSGRYFHI LSALLHLHPP WKSPAMSRYY LELFQCPTCM 501 550 ENSP00000265140/1-1058 KGAWSLVEVL IRSCLFNESF CHQISEN-IG SKVLHLTLLK FFFNLIESEV ENSBTAP00000008026/1-1050 RSTFKVIHLH IVSCLFNESF CHQISENIIG SKVLHLTLLK FFFNLIESEV ENSTTRP00000006297/1-895 KGAWSLIEVL IRSCLFSESF CHQISENIIG SKLLHLTLLK FFFNLVKSEV bmy_19750T0/1-1057 KGAWSLIEVL IRSCLFSESF CHQISENIIG SKVLHLTLLK FFFNLVESEV BACU017779/1-1057 KGAWSLIEVL IRSCLFSESF CHQISENIIG SKVLHLTLLK FFFNLVESEV 551 600 ENSP00000265140/1-1058 QHLSQKLYDW SDSQNLKITG KAMLLEIFWS GSETSGLLTK PVNMLLEWTI ENSBTAP00000008026/1-1050 RHLSQKLYDW SDSQSLKITG KAVLLEIFWS GNETSGLLTK PVNMLLEWTI ENSTTRP00000006297/1-895 RHLSQKLYDW SDSQSLKITG KAVLLEIFWS GSETSGLLTK PINMLLEWTI bmy_19750T0/1-1057 RHLSQKLYXW SDSQSLKITG KAVLLEIFWS GSETSGLLTK PVNMLLEWTI BACU017779/1-1057 RHLSQKLYDW SDSQSLKITG KAVLLEIFWS GSETSGLLTK PVNMLLEWTI 601 650 ENSP00000265140/1-1058 YSHKEKFKSN DVFKHELAYL LAGILGAAID YWIFLGLKMG RNVMRHMSDD ENSBTAP00000008026/1-1050 YSHKEKCKSN DVFRHELAYL LTGILGAAID YWIVLGLNMG RNVMRHMSDD ENSTTRP00000006297/1-895 YSHKEKCKSS DVFKHELAYL LTGILGAAID YWIVLGLKMG RNVMRHMSDD bmy_19750T0/1-1057 YSHKEKCKSN DVFKHELAYL LTGILGAAID YWIVLGLKMG RNVMRHMSDD BACU017779/1-1057 YSHKEKCKSN DVFKHELAYL LTGILGAAID YWIVLGLKMG RNVMRHMSDD 651 700 ENSP00000265140/1-1058 LGSYVSLSCD DFSSQELEIF ICSFSSSWLQ MFVAEAVFKK LCLQSSGSVS ENSBTAP00000008026/1-1050 VGSYVSLSCD DFSSQDLEIF ISSFSSSWLQ MFVAEAVFKK LCLQNSISIS ENSTTRP00000006297/1-895 LGSYVSLSCD DFSSQELEIF ICSFSSSWLQ MFVAEAVFKK LCLQSSISIS bmy_19750T0/1-1057 LGSYVSLSCD DFSSQELEIF ICSFSSSWLQ MFVAEAVFKK LCLQSSISIS BACU017779/1-1057 LGSYVSLSCD DFSSQELEIF ICSFSSSWLQ MFVAEAVFKK LCLQSSISIS 701 750 ENSP00000265140/1-1058 SEPLSLQKMV YSYLPALGKT GVLGSGKIQV SKKIGQRPCF DSQRTLLMLN ENSBTAP00000008026/1-1050 SEPLSLQKMV YSYLPALGKT GVRGTRKMQK PKKIGLRPCF ESQRALIMLN ENSTTRP00000006297/1-895 SEPLSLQKMV YSYLPALGKT GVHGTGKMQI PKKIGQRPCF ESQRALIMLN bmy_19750T0/1-1057 SEPLSLQKMV YSYLPALGKT GVHGTGKMQI PKKIGPRPCF ESQRALIMLN BACU017779/1-1057 SEPLSLQKMV YSYLPALGKT GVHGTGKMQI PKKIGPRPCF ESQRALIMLN 751 800 ENSP00000265140/1-1058 GTKQKQVEGL PELLDLNLAK CSSSLKKLKK KSEGELSCSK ENCPSVVKKM ENSBTAP00000008026/1-1050 GAKQKQGEGL PEIPELNLAK CSSSLKRLKK KSEGELSCSK ENCPSLVTKI ENSTTRP00000006297/1-895 GAKQKQVEGL PELPELNLAK CSSSLKRLKK KSEGELSCSK ENCPSLVTKI bmy_19750T0/1-1057 GAKQKQVEGL PELPELNLAK CSSSLKRLKK KSEGELSCSK ENCPSLVTKI BACU017779/1-1057 GAKQKQVEGL PELPELNLAK CSSSLKRLKK KSEGELSCSK ENCPSLVTKI 801 850 ENSP00000265140/1-1058 NFHKTNLKGE TALHRACINN QVEKLILLLS LPGIDINVKD NAGWTPLHEA ENSBTAP00000008026/1-1050 NFHKTNLKGE TALHRACINN QVDRLILLLS MPGIDINVKD NAGWTPLHEA ENSTTRP00000006297/1-895 N-HKTN-KGE TALHRACINN QVEKLILLLS MPGIDINVKD NAGWTPLHEA bmy_19750T0/1-1057 NFHKTNLKGE TALHRACINN QVEKLILLLS MPGIDINVKD NAGWTPLHEA BACU017779/1-1057 NFHKTNLKGE TALHRACINN QVEKLILLLS MPGIDINVKD NAGWTPLHEA 851 900 ENSP00000265140/1-1058 CNYGNTVCVQ EILQRCPEVD LLTQVDGVTP LHDALSNGHV EIGKLLLQHG ENSBTAP00000008026/1-1050 CNYGNTVCVQ EILQRCPEVD LLTQVDGVTP LHDALSNGHV EIGKLLLQHG ENSTTRP00000006297/1-895 CNYGNTVCVQ EILQRCPEVD LLTQVDGVTP LHDALSNGHV EIGKLLLQHG bmy_19750T0/1-1057 CNYGNTVCVQ EILQRCPEVD LLTQVDGVTP LHDALSNGHV EIGKLLLQHG BACU017779/1-1057 CNYGNTVCVQ EILQRCPEVD LLTQVDGVTP LHDALSNGHV EIGKLLLQHG 901 950 ENSP00000265140/1-1058 GPVLLQQRNA KGELPLDYVV SPQIKEELFA ITKIEDTVEN FHAQAEKHFH ENSBTAP00000008026/1-1050 GPVLLQQRNS KGELPLDYVV SSQIKEELFA ITKIEDTVEN FHAQAEKHFY ENSTTRP00000006297/1-895 ---------- ---------- ---------- ---------- ---------- bmy_19750T0/1-1057 GPVLLQQRNS KGELPLDYVV SSQVKEELFA ITKIEDTVEN FHAQAEKHFY BACU017779/1-1057 GPVLLQQRNS KGELPLDYVV SSQVKEELFA ITKIEDTVEN FHAQAEKHFY 951 1000 ENSP00000265140/1-1058 YQQLEFGSFL LSRMLLNFCS IFDLSSEFIL ASKGLTHLNE LLMACKSHKE ENSBTAP00000008026/1-1050 HQQLEFGSFL LSRMLLNFCS IFGLSSE-SL AFKGLTHLSE LLIACQNYKE ENSTTRP00000006297/1-895 ---------- ---------- ---------- ---------- ---------- bmy_19750T0/1-1057 HQQLEFGSFL LSRMLLNFCS VFGLSSELFL AFRGLTHLNE LLIPCQNYKE BACU017779/1-1057 HQQLEFGSFL LSRMLLNFCS VFGLSSELFL AFRGLTHLNE LLIPCQNYKE 1001 1050 ENSP00000265140/1-1058 TTSVHTDWLL DLYAGNIKTL QKLPHILKEL PENLKVCPGV HTEALMITLE ENSBTAP00000008026/1-1050 TTSVHTDWLL DLYARNIMTL QKLPNALKEL PENVKVCPGV HTEALLVTLE ENSTTRP00000006297/1-895 ---------- ---------- ---------- ---------- ---------- bmy_19750T0/1-1057 TTSARTDWLL DLYARNIKTL QKLPNILKEL PENLKACPGV HTEALLVTLE BACU017779/1-1057 TTSARTDWLL DLYARNIKTL QKLPNILKEL PENLKACPGV HTEALLVTLE 1051 1100 ENSP00000265140/1-1058 MMCRSVMEFS ENSBTAP00000008026/1-1050 VMCRSVTEIS ENSTTRP00000006297/1-895 ---------- bmy_19750T0/1-1057 MMCRSVTEFS BACU017779/1-1057 MMCRSVTEFS