KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:33:53 2014 Check: 00 .. Name: ENSP00000337313/1-707 Len: 1004 Check: 7268 Weight: 1.00 Name: ENSBTAP00000008035/1-710 Len: 1004 Check: 8501 Weight: 1.00 Name: ENSTTRP00000014984/1-702 Len: 1004 Check: 662 Weight: 1.00 Name: BACU013640/1-869 Len: 1004 Check: 9938 Weight: 1.00 Name: bmy_01455T0/1-680 Len: 1004 Check: 1318 Weight: 1.00 // 1 50 ENSP00000337313/1-707 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000008035/1-710 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000014984/1-702 ---------- ---------- ---------- ---------- ---------- BACU013640/1-869 MAASDTERDG LAPEKTSPDR DKKKEQSDVS VSPRASKHHY SRSRSRSRER bmy_01455T0/1-680 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000337313/1-707 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000008035/1-710 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000014984/1-702 ---------- ---------- ---------- ---------- ---------- BACU013640/1-869 KRKSDNEGRK HRSRSRSKEA RRHESKDKSS KKHKSEEHND KEHSSDKGRE bmy_01455T0/1-680 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000337313/1-707 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000008035/1-710 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000014984/1-702 ---------- ---------- ---------- ---------- ---------- BACU013640/1-869 RLNSSENGED RHKRKERKSS RGRSHSRSRS RERLERAKKL QEQREKEMVE bmy_01455T0/1-680 ---------- ---------- ---------- ---------- ---------- 151 200 ENSP00000337313/1-707 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000008035/1-710 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000014984/1-702 ---------- ---------- ---------- ---------- ---------- BACU013640/1-869 KQKQQEIAAA AAATGGSVLN VAALLASGTQ VTPQIAMAAQ MAALQAKALA bmy_01455T0/1-680 ---------- ---------- ---------- ---------- ---------- 201 250 ENSP00000337313/1-707 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000008035/1-710 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000014984/1-702 ---------- ---------- ---------- ---------- ---------- BACU013640/1-869 ETGIAVPSYY NPAAVNPMKF AEQEKKRKML WQGKKEGDKS QSAEIWEKLN bmy_01455T0/1-680 ---------- ---------- ---------- ---------- ---------- 251 300 ENSP00000337313/1-707 ---------- ---------- ---------- ---------- --MAAEVYFG ENSBTAP00000008035/1-710 ---------- ---------- ---------- ---------- --MAAEVDFG ENSTTRP00000014984/1-702 ---------- ---------- ---------- ---------- --MAAEVDFG BACU013640/1-869 FGNKDQNVKF RKLMGIKSED EAGCSSVDEE SYKTLKQQEE PKMAAEVDFG bmy_01455T0/1-680 ---------- ---------- ---------- ---------- --MAAEVDFG 301 350 ENSP00000337313/1-707 DLELFEPFDH PEESIPKPVH TRFKDDDGDE EDENGVGDAE LRERLRQCEE ENSBTAP00000008035/1-710 DLELFEAFDH PEESTPKPVH TRFKDDDGDE EDENGIGDVE LRERLRQCEE ENSTTRP00000014984/1-702 DLELFEAFDH LEESTPKPVH TLFKDDDGDE EDENGVGDAE LRERLRQYEE BACU013640/1-869 DLELFEAFDH LEESTPKPVH TLFKDDDGDE EDENGVGDAE LRERLRQYEE bmy_01455T0/1-680 DLELFEAFDH LEESTPKPVH TLFKDDDGDE EDENGVGDAE LRERLRH--- 351 400 ENSP00000337313/1-707 TIEQLRAENQ ELKRKLNILT RPSGILVNDT KLDGPILQIL FMNNAISKQY ENSBTAP00000008035/1-710 TIEQLRAENQ ELKRKLNILT RPSGILVNNT KLDGPLLQIL FMNNVISKQY ENSTTRP00000014984/1-702 TIEQLRAENQ ELKRKLNILT RPSGILVNNT KLYGPLFQIL FMNNVISKQY BACU013640/1-869 TIEQLRAENI LPARWALSLG SVVGILVNNT KLDGPLFQIL FMNNVISKQY bmy_01455T0/1-680 ---------- ---------- ---GILVNNT KLDGPLFQIL FMNNVISKQY 401 450 ENSP00000337313/1-707 HQEIEEFVSN LVKRFEEQQK NDVEKTSFNL LPQPSSIVLE EDHKVEESCA ENSBTAP00000008035/1-710 HQEIEEFVSN LVKRFEEQQK NDVEKTSFNL LPQPSSVMLE EDHKVEESSA ENSTTRP00000014984/1-702 HQEIEEFVSN LVKRFEEQQK NDVEKTSFNL LPQPSSVMLE EDHKVEESSA BACU013640/1-869 HQEIEEFVSN LVKRFEEQQK NDVEKTSFNL LPQPSSVMLE EDHKVEESSA bmy_01455T0/1-680 HQEIEEFVSN LVKRFEEQQK NDVEKTSFNL LPQPSSVMLE EDHKVEESSA 451 500 ENSP00000337313/1-707 IKNNKEAFSV VGSVLYFTNF CLDKLGQPLL NENPQLSEGW EIPKYHQVFS ENSBTAP00000008035/1-710 V-NNKEAFSV VGSVLYFTNF CLDKLGQPLL NENPQLTEGW EIPKYQQVFS ENSTTRP00000014984/1-702 V-NNKEAFSV VGSVLYFTNF CLDKLGQPLL NENPQLTEGW EIPKYQQVFS BACU013640/1-869 V-NNKEAFSV VGSVLYFTNF CLDKLGQPLL NENPQLTEGW EIP------- bmy_01455T0/1-680 V-NNKEAFSV VGSVLYFTNF CLDKLGQPLL NENPQLTEGW EIPKYQQVFS 501 550 ENSP00000337313/1-707 HIVSLEGQEI QVKAK---RP KPHCFNCGSE EHQMKDCPMP RNAARISEKR ENSBTAP00000008035/1-710 HIVSLEGQEI QVKAKRPNRP KPHCFNCGSE EHQMKDCPMP RNAARISEKR ENSTTRP00000014984/1-702 HIVSLEGQEI QVKAK---RP KPHCFNCGSE EHQMKDCPMP RNAARISEKR BACU013640/1-869 ---------- ---------- ---------- ---------- ---------- bmy_01455T0/1-680 HIVSLEGQEI QVKAK---RP KPHCFNCGSE EHQMKDCPMP RNAARISEKR 551 600 ENSP00000337313/1-707 KEYMDACGEA NNQNFQQRYH AEEVEERFGR FKPGVISEEL QDALGVTDKS ENSBTAP00000008035/1-710 KEYMDACGET NNQNFQQRYH AEEVEERFGR FKPGVISEEL QDALGVTDKS ENSTTRP00000014984/1-702 KEYMDACGET SSQNFQQRYH AEEVEERFGR FKPGVISEEL QDALGVTDKS BACU013640/1-869 ---------- ---------- ---------- ------NEEL QDALGVTDKS bmy_01455T0/1-680 KEYMDACGET SNQNFQQRYH AEEVEERFGR FKPGVISEEL QDALGVTDKS 601 650 ENSP00000337313/1-707 LPPFIYRMRQ LGYPPGWLKE AELENSGLAL YDGKDGTDGE TEVGEIQQNK ENSBTAP00000008035/1-710 LPPFIYRMRQ LGYPPGWLKE AELENSGLAL YDGKDGADGE TEAGEVQQNK ENSTTRP00000014984/1-702 LPPFIYRMRQ LGYPPGWLKE AELETSGLAL YD-KDGADGE TEAGEVQQNK BACU013640/1-869 LPPFIYRMRQ LGYPPGWLKE AELETSGLAL YDGK------ ---------- bmy_01455T0/1-680 LPPFIYRMRQ LGYPPGWLKE AELETSGLAL YDGKDGADGE TEAGEVQQNK 651 700 ENSP00000337313/1-707 SVTYDLSKLV NYPGFNISTP RGIPDEWRIF GSIPMQACQQ KDVFANYLTS ENSBTAP00000008035/1-710 SVTYDLSKLV NYPGFNISTP RGIPDEWRIF GSIPMQACQQ KDVFANYLTS ENSTTRP00000014984/1-702 IVTYDLSKLV NYPGFNISTP RGIPDEWRMF GSIPMQACQQ KDVFANYLTS BACU013640/1-869 ---------- ---------- -GI--EWRMF GSIPMQACQQ KDVFANYLTS bmy_01455T0/1-680 SVTYDLSKLV NYPGFNISTP RGIPDEWRMF GSIPMQACQQ KDVFANYLTS 701 750 ENSP00000337313/1-707 NFQAPGVKSG NKRSSSHSSP GSPKKQKNES NSAGSPADME LDSDMEVPHG ENSBTAP00000008035/1-710 NFQAPSMKSS SKRSSSRSSP SSPKKQKKEN SAAASPADME LDSDAEVPHG ENSTTRP00000014984/1-702 NFQAPSVRSS SKRSSSLPRP SSPKKQKKEG SLAASPADME LDSXXXXXXX BACU013640/1-869 NFQAPSVRSS SKRSSSLPSP SSPKKQKKEG SSAASPADME LDSDAEVPHG bmy_01455T0/1-680 NFQAPSVRSS SKRSSSLPSP SSPKKQKKEG SSAASPADME LDSDAEVPHG 751 800 ENSP00000337313/1-707 SQSSESFQFQ PPLPPDT-PP LPRGTPPPVF TPPLPKGTPP LTPSDSPQTR ENSBTAP00000008035/1-710 SPSSEAFQFQ PPLPPGTPPP LPRGTPPPIF TPPLPKGTPP LTPSDSPRMR ENSTTRP00000014984/1-702 XXXXXTFQ-Q PPL-PGT-PP LPRS-PPPIF TPPLPKGTPP LTPSDSPQTR BACU013640/1-869 PPSSEAFQFQ PPLPPGT-PP LPRSTPPPIF TPPLPKGTPP LTPSGSPQTR bmy_01455T0/1-680 PPSSEAFQFQ PPLPPGT-PP LPRSTPPPIF TPPLPKGTPP LTPSDSPQTR 801 850 ENSP00000337313/1-707 TASGAVDEDA LTLEELEEQQ RRIWAALEQA ESVNSDSDVP VDTPLTGNSV ENSBTAP00000008035/1-710 TASVTMDEDS LTLEELEEQQ RQIWAALEQA ESVNSDSDIP VDTPLTGNSV ENSTTRP00000014984/1-702 TASVTMDEDA LTLEELEEQQ RRIWAALEQA ESVNSDSDIP VDTPLTGNSV BACU013640/1-869 TASVTMDEDA LTLEELEEQQ RRIWAALEQA ESVNSDSDIP VDTPLTGNSV bmy_01455T0/1-680 TASVTMDEDA LTLEELEEQQ RRIWAALEQA ESVNSDSDIP VDTPLTGNSV 851 900 ENSP00000337313/1-707 ASSPCPNELD LPVPEGKTSE KQTLDEPEVP EIFTKKSEAG HASSPDSEVT ENSBTAP00000008035/1-710 ASSPCPNEPD LPVPEGKTPE RQVPGEAEVL DTAAKKSEEE QALSPDSETA ENSTTRP00000014984/1-702 ASSPCPNEPD LPVPEGKTSE KQMSDEAEVP DTSTEKSEVE QTSSPDSEAA BACU013640/1-869 ASSPCPNEPD LPVPEGKTSE KQMSDEAEVP DTCTEKSEVE QTSSPDSEAA bmy_01455T0/1-680 ASSPCPNEPD LPVPEGKTSE KQMSDEAEVP DTCTEKSEVE QTSSPDSEAA 901 950 ENSP00000337313/1-707 SLCQKEKAEL APVNTEGALL DNGSVVPNCD ISNGG-SQKL FPADTSPSTA ENSBTAP00000008035/1-710 LLGQKEKEES TQVDPKGA-H DHGRVESNSE VRNGGSSQQL LHADCSPAAA ENSTTRP00000014984/1-702 LPGQKEEEEP AQVDSKGA-L DSGRVESDCE VKNGGSSPKL LQADASPGTA BACU013640/1-869 LPGQKQEEGP AEADSEGT-L DSGRVGSDCE VKNGGSSQKL LQTDTSPGTT bmy_01455T0/1-680 LRGQKEEEGP AEADSEGT-L DSGRVGSDCE VKNGGSSQKL LQTDTSPGTA 951 1000 ENSP00000337313/1-707 TKIHSPIPDM SKFATGITPF EFENMAESTG MYLRIRSLLK NSPRNQQKNK ENSBTAP00000008035/1-710 TKAHSAIPDM SKFATGITPF EFENMAESTG MYLRIRNLLK NSPRNQQKSK ENSTTRP00000014984/1-702 TKIHSPVPDM SKFATGITPF EFENMAESTG MYLRIRNLLK NSPRNQQKNK BACU013640/1-869 TKIHSPVPDM SKFATGITPF EFENMAESTG MYLRIRNLLK NSPRNQQKHK bmy_01455T0/1-680 TKIHTPVPDM SKFATGITPF EFENMAESTG MYLRIRNLLK NSPRNQQKHK 1001 1050 ENSP00000337313/1-707 KASE ENSBTAP00000008035/1-710 KTSE ENSTTRP00000014984/1-702 KASE BACU013640/1-869 KASE bmy_01455T0/1-680 KTSE