KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:34:12 2014 Check: 00 .. Name: ENSP00000353013/1-490 Len: 492 Check: 7249 Weight: 1.00 Name: ENSBTAP00000008066/1-490 Len: 492 Check: 4889 Weight: 1.00 Name: bmy_03859T0/1-491 Len: 492 Check: 8004 Weight: 1.00 Name: BACU007379/1-477 Len: 492 Check: 5705 Weight: 1.00 // 1 50 ENSP00000353013/1-490 MRPAFALCLL WQALWPGPGG GEHPTADRAG CSASGACYSL HHATMKRQAA ENSBTAP00000008066/1-490 MRPALALCFL WQAFWPRPGR GEHPTADRAS CSASGACYSL HHATFKRQEA bmy_03859T0/1-491 MRPALALCLL WQAFWSRPGS GEHPTADRAG CSASGACYSL HHATFKRQEA BACU007379/1-477 MRPALALCLL WQAFWPRPGS GEHPTADRAG CSASGACYSL HHATFKRQEA 51 100 ENSP00000353013/1-490 EEACILRGGA LSTVRAGAEL RAVLALLRAG PGPGGGSKDL LFWVALERRR ENSBTAP00000008066/1-490 QEACNLRHGV LSTVRGGAEL RAVLALLRAG PGPGGGSKDL LFWVALERRR bmy_03859T0/1-491 EEACSLRGGA LSTVRGDAEL RAVVALLRAG PGPGGGSKDL LFWVALERRR BACU007379/1-477 EEACSLRGGA LSTVRGDAEL RAVVALLRAG PGPGGGSKDL LFWVALERRR 101 150 ENSP00000353013/1-490 SHCTLENEPL RGFSWLSSDP GGLESDTLQW VEEPQRSCTA RRCAVLQATG ENSBTAP00000008066/1-490 SDCTLENEPL RGFSWLSPDV GGSESDTLHW VEEPLLSCTV RRCAGLQATG bmy_03859T0/1-491 SNCTLENEPL RGFSWLSPDV GGSESDTLQW VEEPQRSCTA RSCAGLQATR BACU007379/1-477 SNCTLENEPL RGFSWLSPDV GGSESDTLQW VEEPQRSCTA RSCAGLQATR 151 200 ENSP00000353013/1-490 GVEPAGWKEM RCHLRANGYL CKYQFEVLCP APRPGAASNL SYRAPFQLHS ENSBTAP00000008066/1-490 GVEPAGWKEM RCHQRADGYL CKYQFQSLCP APRPGAASNL SYRAPFQLYS bmy_03859T0/1-491 GIEPAGWKEM RCHQRANGYL CKYQFEGLCP APRPGAASDL SYRAPFQLYS BACU007379/1-477 GIEPAGWKEM RCHQRANGYL CKYQFEGLCP APRPGAASDL SYRAPFQLYS 201 250 ENSP00000353013/1-490 AALDFSPPGT EVSALCRGQL PISVTCIADE IGARWDKL-S GDVLCPCPGR ENSBTAP00000008066/1-490 AALDFSPPGT EVSALCPGQL SITATCTATE VDAHWEGIPS GTELCPCPGR bmy_03859T0/1-491 AALDFSPPGT EVSALCPGQL SITATCTSDE VGARWDGIPS GAVLCPCPGR BACU007379/1-477 AALDFSPPGT EVSALCPGQL SITATCTSDE VGARWDGIPS GAVLCPCPGR 251 300 ENSP00000353013/1-490 YLRAGKCAEL PNCLDDLGGF ACECATGFEL GKDGRSCVTS GEGQPTLGGT ENSBTAP00000008066/1-490 YLRAGKCAEL PDCLDEVGGF ACECAAGFVL GKDGRSCVTN GEGQPTPGGT bmy_03859T0/1-491 YLRAGKCAEL PDCLDDLGGF ACECAADFVL GKDGRSCVTN GEGQPAPGGT BACU007379/1-477 YLRAGKCAEL PDCLDDLGGF ACECAEGFVL G--------- -----APGGS 301 350 ENSP00000353013/1-490 GVPTRRPPAT ATSPVPQRTW PIRVDEKLGE TPLVPEQDNS VTSIPEIPRW ENSBTAP00000008066/1-490 QVVTWHPPAT AASLAPKGTW SPSVQKRPGE IPSAPGQGSA TASFPEIPRW bmy_03859T0/1-491 KVPTWHPPAP TASPVPKGTW SPSVREKPGE IPHAPGQGSS ATSIPEIPRW BACU007379/1-477 QVPTWHPPAP TASPVPKGTW SPSVREKPGE IPHGPGQGSS ATSIPEIPRW 351 400 ENSP00000353013/1-490 GSQ-STMSTL QMSLQAESKA TITPSGSVIS KFNSTTSSAT PQAFDSSSAV ENSBTAP00000008066/1-490 GAQ-STLSTL QMSPQTEVKA DVNSSGTAFP KVNATSPSDN PQAFDSST-V bmy_03859T0/1-491 GAQGTTISTL QMSPQTEAKA DINSSGSVIP KFNSTSSSDN PQAFDSST-V BACU007379/1-477 GAQGTTISTL QMSPQTEAKA DINSSGSVIP KFNSTSSSDN AQAFDSST-V 401 450 ENSP00000353013/1-490 VFIFVSTAVV VLVILTMTVL GLVKLCFHES PSSQPRKESM GPPGLESDPE ENSBTAP00000008066/1-490 VFVLVSMAVV VLVILTVTVL GLFKLCFHKS PSPQQRKGPL ASPGTEGDAE bmy_03859T0/1-491 VFILVSIAVV VLVILTVTVL GLFKLCFHKS PSPRPRKGPL ASPGVESDAE BACU007379/1-477 VFILVSIAVV VLVILTVTVL GLFKLCFHKS PSPRPRKGPL ASPGAESDAE 451 500 ENSP00000353013/1-490 PAALGSSSAH CTNNGVKVGD CDLRDRAEGA LLAESPLGSS DA ENSBTAP00000008066/1-490 AAPLSSSSAR STDNGVKAGD CGLRDKVEGA SLTGSSLGSG DT bmy_03859T0/1-491 AAALSSSSTH CTDNGVKVGD CGLRDRVEGA SLTGSSLGSG DT BACU007379/1-477 AAALSSSSAH CTDNGVKVGD CGLRDRVQGA SLAGSSLGSG DT