KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:34:17 2014 Check: 00 .. Name: ENSTTRP00000015656/1-519 Len: 520 Check: 4144 Weight: 1.00 Name: ENSP00000434939/1-519 Len: 520 Check: 5326 Weight: 1.00 Name: bmy_04105T0/1-413 Len: 520 Check: 7806 Weight: 1.00 Name: BACU008944/1-520 Len: 520 Check: 7778 Weight: 1.00 Name: ENSBTAP00000008081/1-520 Len: 520 Check: 7978 Weight: 1.00 // 1 50 ENSTTRP00000015656/1-519 MDAVLEPFPA DRLFPGSSFL DLGDLNESDF LNNAHFPEHL DHFAENMEDF ENSP00000434939/1-519 MDAVLEPFPA DRLFPGSSFL DLGDLNESDF LNNAHFPEHL DHFTENMEDF bmy_04105T0/1-413 ---------- ---------- ---------- ---------- ------MEDF BACU008944/1-520 MDAVLEPFPA DRLFPGSSFL DLGDLNESDF LNNAHFPEHL DHFGENMEDF ENSBTAP00000008081/1-520 MDAVLEPFPA DRLFPGSSFL DLGDLNESDF LNNAHFPEHL DHFAENMEDF 51 100 ENSTTRP00000015656/1-519 SNDLFSSFFD DPVLDEKSPL LDMELDSPTP GIQAEHSYSL SGDSAPQSPI ENSP00000434939/1-519 SNDLFSSFFD DPVLDEKSPL LDMELDSPTP GIQAEHSYSL SGDSAPQSPL bmy_04105T0/1-413 SNDLFSSFFD DPVLDEKSPL LDMELDSPTP GIQAEHSYSL SGDSAPQSPI BACU008944/1-520 SNDLFSSFFD DPVLDEKSPL LDMELDSPTP GIQAEHSYSL SGDSAPQSPI ENSBTAP00000008081/1-520 SNDLFSSFFD DPVLDEKSPL LDMELDSPTP GIQAEHSYSL SGDSAPQSPV 101 150 ENSTTRP00000015656/1-519 VPIKMEDTTQ DMEHGAWVLG HKLCSVMVKQ EQSLELPMDP LAASSAMAAA ENSP00000434939/1-519 VPIKMEDTTQ DAEHGAWALG HKLCSIMVKQ EQSPELPVDP LAAPSAMAAA bmy_04105T0/1-413 VPIKMEDTTQ DVEHGAWVLG HKLCSVMVKQ EQSPELPVDP LAASSAMAAA BACU008944/1-520 VPIKTEDTTQ DVEHGAWVLG HKLCSVMVKQ EQSPELPVDP LAASSAMAAA ENSBTAP00000008081/1-520 VPIKMEDTTQ DVEHGAWVLG HKLCSVMVKQ EQSPELPVDP LAASSAMAAA 151 200 ENSTTRP00000015656/1-519 AAMATTPLLG LSPLTRLPIP HQAPGEMTQL PVIKAEPQEV NQLLKVTPED ENSP00000434939/1-519 AAMATTPLLG LSPLSRLPIP HQAPGEMTQL PVIKAEPLEV NQFLKVTPED bmy_04105T0/1-413 AAMATTPLLG LSPLTRLPVP HQSWGATL-- ---------L TWLLLLSPED BACU008944/1-520 AAMATTPLLG LSPLTRLPIP HQAPGEMTQL PVIKAEPQEV NQFLKVTPED ENSBTAP00000008081/1-520 AAMATTPLLG LSPLTRLPVP HQAPGEMTQL PVIKAEPQEV HQFLKVTPED 201 250 ENSTTRP00000015656/1-519 LVQMPPTPPS SHGSDSDGSQ SPRSLPPSSP IRPMARSSTA ISTSPLLTAP ENSP00000434939/1-519 LVQMPPTPPS SHGSDSDGSQ SPRSLPPSSP VRPMARSSTA ISTSPLLTAP bmy_04105T0/1-413 LLQMPPTPPS SHGSDSDGSQ SPRSLPPSSP IRPMARSSTA ISTSPLLTAP BACU008944/1-520 LVQMPPTPPS SHGSDSDGSQ SPRSLPPSSP IRPMARSSTA ISTSPLLTAP ENSBTAP00000008081/1-520 LLQMPPTPPS SHGSDSDGSQ SPRSLPPSSP IRPMARSSTA ISTSPLLTAP 251 300 ENSTTRP00000015656/1-519 HKLQGTSGPL LLTEEEKRTL IAEGYPIPTK LPLTKAEEKA LKRVRRKIKN ENSP00000434939/1-519 HKLQGTSGPL LLTEEEKRTL IAEGYPIPTK LPLTKAEEKA LKRVRRKIKN bmy_04105T0/1-413 H--------- ---------- ---------- ---------- ---------- BACU008944/1-520 HKLQGTSGPL LLTEEEKRTL IAEGYPIPTK LPLTKAEEKA LKRVRRKIKN ENSBTAP00000008081/1-520 HKLQGTSGPL LLTEEEKRTL VAEGYPIPTK LPLTKAEEKA LKRVRRKIKN 301 350 ENSTTRP00000015656/1-519 KISAQESRRK KKEYVECLEK KVETFTSENN ELWKKVETLE NANRTLLQQL ENSP00000434939/1-519 KISAQESRRK KKEYVECLEK KVETFTSENN ELWKKVETLE NANRTLLQQL bmy_04105T0/1-413 -ISAQESRRK KKEYVECLEK KVETFTSENN ELWKKVETLE NANRTLLQQL BACU008944/1-520 KISAQESRRK KKEYVECLEK KVETFTSENN ELWKKVETLE NANRTLLQQL ENSBTAP00000008081/1-520 KISAQESRRK KKEYVECLEK KVETFTSENN ELWKKVETLE NANRTLLQQL 351 400 ENSTTRP00000015656/1-519 QKLQTLVTNK ISRPYKMAAT QTGTCLMXXX XXXXXXXXXX XXXXXXXXXX ENSP00000434939/1-519 QKLQTLVTNK ISRPYKMAAT QTGTCLMVAA LCFVLVLGSL VPCLPEFSSG bmy_04105T0/1-413 QKLQTLVTNK ISRPYKMAAT QTGTCLMVAA LCFVLVLGSL VPCLPEFSSG BACU008944/1-520 QKLQTLVTNK ISRPYKMAAT QTGTCLMVAA LCFVLVLGSL VPCLPEFSSG ENSBTAP00000008081/1-520 QKLQTLVTSK ISRPYKMAAT QTGTCLMVAA LCFVLVLGSL VPCLPEFSSG 401 450 ENSTTRP00000015656/1-519 XXXXXXXXXX XXXXXXXXXX PSRSXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000434939/1-519 SQTVKEDPLA ADGVYTASQM PSRSLLFYDD GAGLWEDGRS TLLPMEPPDG bmy_04105T0/1-413 SQTVKEDPMA TDSVYTASQM PSRSLLFYDE GAGSWEDGRS ALLPVEPPDG BACU008944/1-520 SQTVKEDPMA TDSVYTASQM PSRSLLFYDE GAGSWEDGRS ALLPVEPPDG ENSBTAP00000008081/1-520 SQTVKEDPMA TDSVYAASQM PSRSLLFYDE GAGSWEDGRS ALLPVEPPDG 451 500 ENSTTRP00000015656/1-519 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXX- XXXXXXXXXX ENSP00000434939/1-519 WEINPGGPAE QRPRDHLQHD HLDSTHETTK YLSEAWPKD- GGNGTSPDFS bmy_04105T0/1-413 WEIKPGGPAE QRPQDHLQHD HLDSTHETSK YLSEAWPKDV GGNSTSPDFS BACU008944/1-520 WEIKPGGPAE QRPQDHLQHD HLDSTHETSK YLSEAWPKDV GGNSTSPDFS ENSBTAP00000008081/1-520 WEIKPGGPVE QRPQDHLQHD HLDSTHETSK YLSEAWPKDV GGNSTGPDFS 501 550 ENSTTRP00000015656/1-519 XXXXXXXXXX LGPNTTIKLS ENSP00000434939/1-519 HSKEWFHDRD LGPNTTIKLS bmy_04105T0/1-413 HPKEWFHERD LGPNTTIKLS BACU008944/1-520 HPKEWFHERD LGPNTTIKLS ENSBTAP00000008081/1-520 HPKEWFHERD LGPNTTVKLS