KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:34:18 2014 Check: 00 .. Name: ENSP00000417078/1-1008 Len: 1016 Check: 2820 Weight: 1.00 Name: ENSBTAP00000008082/1-1010 Len: 1016 Check: 9883 Weight: 1.00 Name: BACU000434/1-549 Len: 1016 Check: 5431 Weight: 1.00 Name: bmy_18987T0/1-907 Len: 1016 Check: 2248 Weight: 1.00 Name: ENSTTRP00000016006/1-1012 Len: 1016 Check: 4136 Weight: 1.00 // 1 50 ENSP00000417078/1-1008 MSYDYHQNWG -----RDGGP RSSGGGYGGG PAGGHGGNRG S---GGGGGG ENSBTAP00000008082/1-1010 MSYDYHQNWG -----RDGGP RSSGGGYGGS YGGSHGGGHG GNRGSGGGGG BACU000434/1-549 MSYDYQQNWG -----RDSGP RSSGGGYGGS YGGGHGGNRG SGGGGGGGGG bmy_18987T0/1-907 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000016006/1-1012 MSYDYHQNWG RDGGGRDGGS RSSGGGYGGS YGGGHGGNRG S---GGGGGG 51 100 ENSP00000417078/1-1008 GGGGRGGRGR HPGHLKGREI GMWYAKKQGQ KNKEAERQER AVVHMDERRE ENSBTAP00000008082/1-1010 GGGGRGGRGR HPGHLKGREI GLWYAKKQGQ KNKEAERQER AVVHMDERRE BACU000434/1-549 GGGGRGGRGR HPGHLKGREI GLWYAKKQGQ KNKEAERQER AVVHMDERRE bmy_18987T0/1-907 ---------- ---------- ---------- ---------- ----MDERRE ENSTTRP00000016006/1-1012 GGGGRGGRGR HPGHLKGREI GLWYAKKQGQ KNKEAERQER AVVHMDERRE 101 150 ENSP00000417078/1-1008 EQIVQLLNSV QAKNDKESEA QISWFAPEDH GYGTEVSTKN TPCSENKLDI ENSBTAP00000008082/1-1010 EQIVQLLHSV QTKNDKDEEA QISWFAPEDH GYGTEAPAEN KPNSVKNVEH BACU000434/1-549 EQIVQLLHSV QAKNDKDSEA QISWFAPEDH GYGTEAPAEN KPNSVKKVED bmy_18987T0/1-907 EQIVQLLHSV QAKNDKDSEA QISWFAPEDH GYGTEAPAEN KPNSVKKVED ENSTTRP00000016006/1-1012 EQIVQLLHSV QAKNDKDSEA QISWFAPEDH GYGTEAPAEN KPNSVKKVED 151 200 ENSP00000417078/1-1008 QEKKLINQEK KMFRIRNRSY IDRDSEYLLQ ENEPDGTLDQ KLLEDLQKKK ENSBTAP00000008082/1-1010 QEKKMINQEK RPFRIRDK-Y IDRDSEYLLQ ENEPDATLDQ QLLEDLQKKK BACU000434/1-549 QEKKLINQEK RPFRIRDK-Y IDRDSEYLLQ ENEPDVTLDQ QLLEDFQKKK bmy_18987T0/1-907 QEKKLINQEK RPFRIREK-Y IDRDSEYLLQ ENEPDVTLDQ QLLEDLQKKK ENSTTRP00000016006/1-1012 QGKKMINQEK RPFRIRDK-Y IDRDSEYLLQ ENEPDVTLDQ QLLEDLQKKK 201 250 ENSP00000417078/1-1008 NDLRYIEMQH FREKLPSYGM QKELVNLIDN HQVTVISGET GCGKTTQVTQ ENSBTAP00000008082/1-1010 TDLRYIEMQR FREKLPSYGM QKELVNMIDN HQVTVISGET GCGKTTQVTQ BACU000434/1-549 TDLRYIEMQH FREKLPSYGM QKELVNMIDN HQVTVVSGET GCGKTTQVTQ bmy_18987T0/1-907 TDLRYIEMQH FREKLPSYGM QKELVNMIDN HQVTVVSGET GCGKTTQVTQ ENSTTRP00000016006/1-1012 TDLRYIEMQH FREKLPSYGM QKELVNMIDN HQVTVVSGET GCGKTTQVTQ 251 300 ENSP00000417078/1-1008 FILDNYIERG KGSACRIVCT QPRRISAISV AERVAAERAE SCGSGNSTGY ENSBTAP00000008082/1-1010 FILDNYIERG KGSACRIVCT QPRRISAISV AERVAAERAE SCGNGNSTGY BACU000434/1-549 FILDNYIERG KGSACRIVCT QPRRISAISV AERVAAERAE SCGNGNSTGY bmy_18987T0/1-907 FILDNYIERG KGSACRIVCT QPRRISAISV AERVAAERAE SCGNGNSTGY ENSTTRP00000016006/1-1012 FILDNYIERG KGSACRIVCT QPRRISAISV AERVAAERAE SCGNGNSTGY 301 350 ENSP00000417078/1-1008 QIRLQSRLPR KQGSILYCTT GIILQWLQSD PYLSSVSHIV LDEIHERNLQ ENSBTAP00000008082/1-1010 QIRLQSRLPR KQGSILYCTT GIILQWLQSD PHLSSVSHIV LDEIHERNLQ BACU000434/1-549 QIRLQSRLPR KQGSILYCTT GIILQWLQSD QHLSSVSHIV LDEIHERNLQ bmy_18987T0/1-907 QIRLQSRLPR KQGSILYCTT GIILQWLQSD QHLSSVSHIV LDEIHERNLQ ENSTTRP00000016006/1-1012 QIRLQSRLPR KQGSILYCTT GIILQWLQSD PHLSSVSHIV LDEIHERNLQ 351 400 ENSP00000417078/1-1008 SDVLMTVVKD LLNFRSDLKV ILMSATLNAE KFSEYFGNCP MIHIPGFTFP ENSBTAP00000008082/1-1010 SDVLMTVVKD LLSYRPDLKV VLMSATLNAE KFSEYFGNCP MIHIPGFTFP BACU000434/1-549 SDVLMTVVKD LLNYRPDLKI VLMSATLNAE KFSEYFGNCP MIHIPGFTFP bmy_18987T0/1-907 SDVLMTVVKD LLNYRPDLKI VLMSATLNAE KFSEYFGNCP MIHIPGFTFP ENSTTRP00000016006/1-1012 SDVLMTVVKD LLNYRPDLKI VLMSATLNAE KFSEYFGNCP MIHIPGFTFP 401 450 ENSP00000417078/1-1008 VVEYLLEDVI EKIRYVPEQK EHRSQFKRGF MQGHVNRQEK EEKEAIYKER ENSBTAP00000008082/1-1010 VVEYLLEDII EKIRYVPEQK EHRSQFKKGF MQGHVNRQEK EEKEAIYKER BACU000434/1-549 VVEYLLEDII EKIRYVPEQK EHRSQFKRGF MQGHVNRQEK EEKEAIYKER bmy_18987T0/1-907 VVEYLLEDII EKIRYVPEQK EHRSQFKRGF MQGHVNRQEK EEKEAIYKER ENSTTRP00000016006/1-1012 VVEYLLEDII EKTRYVPEQK EHRSQFKRGF MQGHVNRQEK EEKEAIYKER 451 500 ENSP00000417078/1-1008 WPDYVRELRR RYSASTVDVI EMMEDDKVDL NLIVALIRYI VLEEEDGAIL ENSBTAP00000008082/1-1010 WPGYLRELRQ RYSASTVDVV EMMDDEKVDL NLIAALIRYI VLEEEDGAIL BACU000434/1-549 WPGYVRELRK KYSPSTIDVI GMMDDDKVDL NLIAALIRYI VLEEEDGAIL bmy_18987T0/1-907 WPGYVRELRK KYSPSTIDVI GMMDDDKVDL NLIAALIRYI VLEEEDGAIL ENSTTRP00000016006/1-1012 WPGYVRELRK RYSPSTIDVI GMMDDDKVDL NLIAALIRYI VLEEEDGAIL 501 550 ENSP00000417078/1-1008 VFLPGWDNIS TLHDLLMSQV MFKSDKFLII PLHSLMPTVN QTQVFKRTPP ENSBTAP00000008082/1-1010 VFLPGWDNIS TLHDLLMSQV MFKSDKFIII PLHSLMPTVN QTQVFKRTPP BACU000434/1-549 VFLPGWDNIS TLHDLLMSQV MFKSDRFLII PLHSLMPTVN QTQVYLKEP- bmy_18987T0/1-907 VFLPGWDNIS TLHDLLMSQV MFKS------ --------VN QTQVFKRTPP ENSTTRP00000016006/1-1012 VFLPGWDNIS TLHDLLMSQV MFKSDRFLII PLHSLMPTVN QTQVFKRTPP 551 600 ENSP00000417078/1-1008 GVRKIVIATN IAETSITIDD VVYVIDGGKI KETHFDTQNN ISTMSAEWVS ENSBTAP00000008082/1-1010 GVRKIVIATN IAETSITIDD VVYVIDGGKI KETHFDTQNN ISTMSAEWVS BACU000434/1-549 ---------- ---------- ---------- ---------- ---------- bmy_18987T0/1-907 GVRKIVIATN IAETSITIDD VVYVIDGGKI KETHFDTQNN ISTMSAEWVS ENSTTRP00000016006/1-1012 GVRKIVIATN IAETSITIDD VVYVIDGGKI KETHFDTQNN ISTMSAEWVS 601 650 ENSP00000417078/1-1008 KANAKQRKGR AGRVQPGHCY HLYNGLRASL LDDYQLPEIL RTPLEELCLQ ENSBTAP00000008082/1-1010 KANAKQRKGR AGRVQPGHCY HLYNSLRASL LDDYQLPEIL RTPLEELCLQ BACU000434/1-549 ---------- ---------- ---------- ---------- ---------- bmy_18987T0/1-907 KANAKQRKGR AGRVQPGHCY HLYNGLRASL LDDYQLPEIL RTPLEELCLQ ENSTTRP00000016006/1-1012 KANAKQRKGR AGRVQPGHCY HLYNGLRASL LDDYQLPEIL RTPLEELCLQ 651 700 ENSP00000417078/1-1008 IKILRLGGIA YFLSRLMDPP SNEAVLLSIR HLMELNALDK QEELTPLGVH ENSBTAP00000008082/1-1010 IKILRLGGIA HFLSRLMDPP SNEAVLLSIK HLMELNALDK QEELTPLGVH BACU000434/1-549 ---------- ---------- ---------- ---------- ---------- bmy_18987T0/1-907 IKILRLGGIA YFLSRLMDPP SNEAVLLSIK HLMELNALDK QEELTPLGVH ENSTTRP00000016006/1-1012 IKILRLGGIA YFLSRLMDPP SNEAVLLSIK HLMELNALDK QEELTSLGVH 701 750 ENSP00000417078/1-1008 LARLPVEPHI GKMILFGALF CCLDPVLTIA ASLSFKDPFV IPLGKEKIAD ENSBTAP00000008082/1-1010 LARLPVEPHI GKMILFGALF CCLDPVLTIA ASLSFKDPFV IPLGKEKVAD BACU000434/1-549 ---------- ---------- ---------- ---------- ---------- bmy_18987T0/1-907 LARLPVEPHI GKMILFGALF CCLDPVLTIA ASLSFRDPFV IPLGKEKVAD ENSTTRP00000016006/1-1012 LARLPVEPHI GKMILFGALF CCLDPVLTIA ASLSFRDPFV IPLGKEKVAD 751 800 ENSP00000417078/1-1008 ARRKELAKDT RSDHLTVVNA FEGWEEARRR GFRYEKDYCW EYFLSSNTLQ ENSBTAP00000008082/1-1010 ARRKELAKDT KSDHLTVVNA FKGWEKAKQR GFRYEKDYCW EYFLSSNTLQ BACU000434/1-549 ---------- ---------- ---------- ---------- ---------- bmy_18987T0/1-907 ARRKELAKDT KSDHLTVVNA FEGWEEARQR GFRYEKDYCW EYFLSSNTLQ ENSTTRP00000016006/1-1012 ARRKELAKDT KSDHLTVVNA FEGWEAARQR GFRYEKDYCW EYFLSSNTLQ 801 850 ENSP00000417078/1-1008 MLHNMKGQFA EHLLGAGFVS SRNPKDPESN INSDNEKIIK AVICAGLYPK ENSBTAP00000008082/1-1010 MLHNMKGQFA EHLLGAGFVS SRNPQDPESN INSDNEKIIK AVICAGLYPK BACU000434/1-549 ---------- ---------- ---------- ---------- ---------- bmy_18987T0/1-907 MLHNMKGQFA EHLLGAGFVS SRNPKDPKSN INSDNEKIIK AVICAGLYPK ENSTTRP00000016006/1-1012 MLHNMKGQFA EHLLGAGFVS SRNPKDPKSN INSDNEKIIK AVICAGLYPK 851 900 ENSP00000417078/1-1008 VAKIRLNLGK KRKMVKVYTK TDGLVAVHPK SVNVEQTDFH YNWLIYHLKM ENSBTAP00000008082/1-1010 VAKIRLNLGK KRKMVKVYTK TDGVVAIHPK SVNVEQTEFN YNWLIYHLKM BACU000434/1-549 ---------- ---------- ---------- ---------- ---------- bmy_18987T0/1-907 VAKIRLNLGK KRKMVKVYTK TDGLVAIHPK SVNVEQTEFH YNWLIYHLKM ENSTTRP00000016006/1-1012 VAKIRLNLGK KRKMVKVYTK TDGLVAIHPK SVNVEQTEFH YNWLIYHLKM 901 950 ENSP00000417078/1-1008 RTSSIYLYDC TEVSPYCLLF FGGDISIQKD NDQETIAVDE WIVFQSPARI ENSBTAP00000008082/1-1010 RTSSIYLYDC TEVSPYCLLF FGGDISIQKD NDQETIAVDE WIIFQSPARI BACU000434/1-549 ---------- -------LLV FGK------- ---------- ---------- bmy_18987T0/1-907 RTSSIYLYDC TEVSPYCLLF FGGDISIQKD NDQETIAVDE WIIFQSPARI ENSTTRP00000016006/1-1012 RTSSIYLYDC TEVSPYCLLF FGGDISIQKD NDQETIAVDE WIIFQSPARI 951 1000 ENSP00000417078/1-1008 AHLVKELRKE LDILLQEKIE SPHPVDWNDT KSRDCAVLSA IIDLIKTQEK ENSBTAP00000008082/1-1010 AHLVKELRKE LDILLQEKIE SPHPVDWKDT KSRDCAVLSA IIDLIKTQEK BACU000434/1-549 ---------- ---------- ---------- ---------- ---------- bmy_18987T0/1-907 AHLVKELRKE LDILLQEKIE SPHPVDWKDT KSRDCAVLSA IIDLLKTQEK ENSTTRP00000016006/1-1012 AHLVKELRKE LDILLQEKIE SPHPVDWKDT KSRDCAVLSA IIDLLKTQEK 1001 1050 ENSP00000417078/1-1008 ATPRNFPPRF QDGYYS ENSBTAP00000008082/1-1010 ATPRNLPPRF QDGYYS BACU000434/1-549 ---------- ------ bmy_18987T0/1-907 ATPRNLPPRF QDGYYS ENSTTRP00000016006/1-1012 ATPRNLPPRF QDGYYS