KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:34:20 2014 Check: 00 .. Name: BACU010046/1-331 Len: 523 Check: 1142 Weight: 1.00 Name: ENSBTAP00000008100/1-501 Len: 523 Check: 7232 Weight: 1.00 Name: bmy_03757T0/1-523 Len: 523 Check: 3093 Weight: 1.00 Name: ENSP00000295101/1-501 Len: 523 Check: 6681 Weight: 1.00 Name: ENSTTRP00000003528/1-501 Len: 523 Check: 6725 Weight: 1.00 // 1 50 BACU010046/1-331 ---------- ---------L RIMSALRRKF GDDYQVVTTS SSGSGLQPQG ENSBTAP00000008100/1-501 ---------- ---------- --MSALRRKF GDDYQVVTTS SSGSGLQPQG bmy_03757T0/1-523 MDSSARLLRL RFAFESGSPL RIMSALRRKF GDDYQVVTTS SSGSGLQPQG ENSP00000295101/1-501 ---------- ---------- --MSALRRKF GDDYQVVTTS SSGSGLQPQG ENSTTRP00000003528/1-501 ---------- ---------- --MSALRRKF GDDYQVVTTS SSGSGLQPQG 51 100 BACU010046/1-331 PGQGPQQQLV PKKKRQRFVD KNGRCNVQHG NLGSETSRYL SDLFTTLVDL ENSBTAP00000008100/1-501 PGQGPQQQLV PKKKRQRFVD KNGRCNVQHG NLGSETSRYL SDLFTTLVDL bmy_03757T0/1-523 PGQGPQQQLV PKKKRQRFVD KNGRCNVQHG NLGSETSRYL SDLFTTLVDL ENSP00000295101/1-501 PGQDPQQQLV PKKKRQRFVD KNGRCNVQHG NLGSETSRYL SDLFTTLVDL ENSTTRP00000003528/1-501 PGQGPQQQLV PKKKRQRFVD KNGRCNVQHG NLGSETSRYL SDLFTTLVDL 101 150 BACU010046/1-331 KWRWNLFIFI LTYTVAWLFM ASMWWVIAYT RGDLNKAHVG NYTPCVANVY ENSBTAP00000008100/1-501 KWRWNLFIFI LTYTVAWLFM ASMWWVIAYT RGDLNKAHVG NYTPCVANVY bmy_03757T0/1-523 KWRWNLFIFI LTYTVAWLFM ASMWWVIAYT RGDLNKAHVG NYTPCVANVY ENSP00000295101/1-501 KWRWNLFIFI LTYTVAWLFM ASMWWVIAYT RGDLNKAHVG NYTPCVANVY ENSTTRP00000003528/1-501 KWRWNLFIFI LTYTVAWLFM ASMWWVIAYT RGDLNKAHVG NYTPCVANVY 151 200 BACU010046/1-331 NFPSAFLFFI ETEATIGYGY RYITDKCPEG IILFLFQSIL GSIVDAFLIG ENSBTAP00000008100/1-501 NFPSAFLFFI ETEATIGYGY RYITDKCPEG IILFLFQSIL GSIVDAFLIG bmy_03757T0/1-523 NFPSAFLFFI ETEATIGYGY RYITDKCPEG IILFLFQSIL GSIVDAFLIG ENSP00000295101/1-501 NFPSAFLFFI ETEATIGYGY RYITDKCPEG IILFLFQSIL GSIVDAFLIG ENSTTRP00000003528/1-501 NFPSAFLFFI ETEATIGYGY RYITDKCPEG IILFLFQSIL GSIVDAFLIG 201 250 BACU010046/1-331 CMFIKMSQPK KRAETLMFSE HAVISMRDGK LTLMFRVGNL RNSHMVSAQI ENSBTAP00000008100/1-501 CMFIKMSQPK KRAETLMFSE HAVISMRDGK LTLMFRVGNL RNSHMVSAQI bmy_03757T0/1-523 CMFIKMSQPK KRAETLMFSE HAVISMRDGK LTLMFRVGNL RNSHMVSAQI ENSP00000295101/1-501 CMFIKMSQPK KRAETLMFSE HAVISMRDGK LTLMFRVGNL RNSHMVSAQI ENSTTRP00000003528/1-501 CMFIKMSQPK KRAETLMFSE HAVISMRDGK LTLMFRVGNL RNSHMVSAQI 251 300 BACU010046/1-331 RCKLLKSRQT PEGEFLPLDQ LELDVGFSTG ADQLFLVSPL TICHVIDAKS ENSBTAP00000008100/1-501 RCKLLKSRQT PEGEFLPLDQ LELDVGFSTG ADQLFLVSPL TICHVIDAKS bmy_03757T0/1-523 RCKLLKSRQT PEGEFLPLDQ LELDVGFSTG ADQLFLVSPL TICHVIDAKS ENSP00000295101/1-501 RCKLLKSRQT PEGEFLPLDQ LELDVGFSTG ADQLFLVSPL TICHVIDAKS ENSTTRP00000003528/1-501 RCKLLKSRQT PEGEFLPLDQ LELDVGFSTG ADQLFLVSPL TICHVIDAKS 301 350 BACU010046/1-331 PFYDLSQRSM QSEQFEIVVI LEGIVETT-- ---------- ---------- ENSBTAP00000008100/1-501 PFYDLSQRSM QSEQFEIVVI LEGIVETTGM TCQARTSYTE DEVLWGHRFF bmy_03757T0/1-523 PFYDLSQRSM QSEQFEIVVI LEGIVETTGM TCQARTSYTE DEVLWGHRFF ENSP00000295101/1-501 PFYDLSQRSM QTEQFEIVVI LEGIVETTGM TCQARTSYTE DEVLWGHRFF ENSTTRP00000003528/1-501 PFYDLSQRSM QTEQFEIVVI LEGIVETTGM TCQARTSYTE DEVLWGHRFF 351 400 BACU010046/1-331 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000008100/1-501 PVISLEEGFF KVDYSQFHAT FEVPTPPYSV KEQEEMLLMS SPLIAPAITN bmy_03757T0/1-523 PVISLEEGFF KVDYSQFHAT FEVPTPPYSV KEQEEMLLMS SPLIAPAITN ENSP00000295101/1-501 PVISLEEGFF KVDYSQFHAT FEVPTPPYSV KEQEEMLLMS SPLIAPAITN ENSTTRP00000003528/1-501 PVISLEEGFF KVDYSQFHAT FEVPTPPYSV KEQEEMLLMS SPLIAPAITN 401 450 BACU010046/1-331 ---------- ---------- ---------- --DF------ ---------- ENSBTAP00000008100/1-501 SKERHNSVEC LDGLDDISTK LPSKLQKITG REDFPKKLLR MSSTTSEKAY bmy_03757T0/1-523 SKERHNSVEC LDGLDDISTK LPSKLQKITG REDFPKKLLR MSSTTSEKAY ENSP00000295101/1-501 SKERHNSVEC LDGLDDITTK LPSKLQKITG REDFPKKLLR MSSTTSEKAY ENSTTRP00000003528/1-501 SKERHNSVEC LDGLDDISTK LPSKLQKITG REDFPKKLLR MSSTTSEKAY 451 500 BACU010046/1-331 ----LSFKLE NVLTLV---- ---------- ---------- ---------- ENSBTAP00000008100/1-501 SLGDLPMKLQ RISSVPGNSE EKLVSKTTKM LSDPMSQSVA DLPPKLQKMA bmy_03757T0/1-523 SLGDLPMKLQ RISSVPGNSE EKLVSKTTKM LSDPMSQSVA DLPPKLQKMA ENSP00000295101/1-501 SLGDLPMKLQ RISSVPGNSE EKLVSKTTKM LSDPMSQSVA DLPPKLQKMA ENSTTRP00000003528/1-501 SLGDLPMKLQ RISSVPGNSE EKLVSKTTKM LSDPMSQSVA DLPPKLQKMA 501 550 BACU010046/1-331 ---------F KALFRHM--- --- ENSBTAP00000008100/1-501 GGATRMEGNL PAKLRKMNSD RFT bmy_03757T0/1-523 GGAARMEGNL PAKLRKMNSD RFT ENSP00000295101/1-501 GGAARMEGNL PAKLRKMNSD RFT ENSTTRP00000003528/1-501 GGAARMEGNL PAKLRKMNSD RFT