KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:34:23 2014 Check: 00 .. Name: ENSTTRP00000008897/1-569 Len: 571 Check: 2659 Weight: 1.00 Name: ENSBTAP00000008112/1-571 Len: 571 Check: 9794 Weight: 1.00 Name: ENSP00000363064/1-570 Len: 571 Check: 3651 Weight: 1.00 Name: bmy_10968T0/1-544 Len: 571 Check: 5106 Weight: 1.00 Name: BACU018058/1-570 Len: 571 Check: 4012 Weight: 1.00 // 1 50 ENSTTRP00000008897/1-569 MESLGLQTVT LSDGTTAYVQ QAIKGEKLLE GQVIQLEDGT TAYIHQVTVQ ENSBTAP00000008112/1-571 MESLGLQTVT LSDGTTAYVQ QAVKGDKLLE GQVIQLEDGT TAYIHQVTVQ ENSP00000363064/1-570 MESLGLHTVT LSDGTTAYVQ QAVKGEKLLE GQVIQLEDGT TAYIHQVTVQ bmy_10968T0/1-544 MESLGLQTVT LSDGTTAYVQ QAIKGEKLLE GQVIQLEDGT TAYIHQVTVQ BACU018058/1-570 MESLGLQTVT LSDGTTAYVQ QAIKGEKLLE GQVIQLEDGT TAYIHQVTVQ 51 100 ENSTTRP00000008897/1-569 KEPLSFEDGQ PVQ-LEDGSM AYIHRTPKXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000008112/1-571 KEPLSFEDGQ PVQLLEDGST AYIHQTPTQG YDPSALEAVQ LEDGSTAYIH ENSP00000363064/1-570 KEALSFEDGQ PVQ-LEDGSM AYIHRTPREG YDPSTLEAVQ LEDGSTAYIH bmy_10968T0/1-544 KE-------- ---------- ---------G YDPSALEAVQ LEDGSTAYIH BACU018058/1-570 KEPLSFEDGQ PVQ-LEDGSM AYIHRTPKEG YDPSALEAVQ LEDGSTAYIH 101 150 ENSTTRP00000008897/1-569 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXVLHDS ENSBTAP00000008112/1-571 HPVAVPSDGA ILAVQTEVGL EGLAAEDDEG FSADTVVALE QYTSKVLHES ENSP00000363064/1-570 HPVAVPSEST ILAVQTEVGL EDLAAEDDEG FSADAVVALE QYASKVLHDS bmy_10968T0/1-544 HPVAVPSDST ILAVQTEVGL EDLATEDDEG FSTDTVVALE QYASKVLHDS BACU018058/1-570 HPVAVPSDST ILAVQTEVGL EDLATEDDEG FSTDTVVALE QYASKVLHDS 151 200 ENSTTRP00000008897/1-569 QAPHNGKGQQ VGDRAFRCGY KGCGRLYTTA HHLKVHERAH TGDRPYRCDF ENSBTAP00000008112/1-571 QAPHNGKGQQ VGDRAFRCGY KGCGRLYTTA HHLKVHERAH TGDRPYRCDF ENSP00000363064/1-570 QIPRNGKGQQ VGDRAFRCGY KGCGRLYTTA HHLKVHERAH TGDRPYRCDF bmy_10968T0/1-544 QAPHNGKGQQ VGDRAFRCGY KGCGRLYTTA HHLKVHERAH TGDRPYRCDF BACU018058/1-570 QAPHNGKGQQ VGDRAFRCGY KGCGRLYTTA HHLKVHERAH TGDRPYRCDF 201 250 ENSTTRP00000008897/1-569 PSCGKAFATG YGLKSHVRTH TGEKPYKCPE ELCSKAFKTS GDLQKHVRTH ENSBTAP00000008112/1-571 PSCGKAFATG YGLKSHMRTH TGEKPYKCPE ELCSKAFKTS GDLQKHVRTH ENSP00000363064/1-570 PSCGKAFATG YGLKSHVRTH TGEKPYKCPE ELCSKAFKTS GDLQKHVRTH bmy_10968T0/1-544 PSCGKAFATG YGLKSHVRTH TGEKPYKCPE ELCSKAFKTS GDLQKHVRTH BACU018058/1-570 PSCGKAFATG YGLKSHVRTH TGEKPYKCPE ELCSKAFKTS GDLQKHVRTH 251 300 ENSTTRP00000008897/1-569 TGERPFRCPF EGCGRSFTTS NIRKVHVRTH TGERPYTCPE PHCGRGFTSA ENSBTAP00000008112/1-571 TGERPFRCPF EGCGRSFTTS NIRKVHVRTH TGERPYTCPE PHCGRGFTSA ENSP00000363064/1-570 TGERPFQCPF EGCGRSFTTS NIRKVHVRTH TGERPYTCPE PHCGRGFTSA bmy_10968T0/1-544 TGERPFRCPF EGCGRSFTTS NIRKVHVRTH TGERPYTCPE PHCGRGFTSA BACU018058/1-570 TGERPFRCPF EGCGRSFTTS NIRKVHVRTH TGERPYTCPE PHCGRGFTSA 301 350 ENSTTRP00000008897/1-569 TNYKNHVRIH TGEKPYVCTV PGCGKRFTEY SSLYKHHVVH THCKPYTCST ENSBTAP00000008112/1-571 TNYKNHVRIH TGEKPYVCTV PGCGKRFTEY SSLYKHHVVH THCKPYTCST ENSP00000363064/1-570 TNYKNHVRIH TGEKPYVCTV PGCGKRFTEY SSLYKHHVVH THCKPYTCST bmy_10968T0/1-544 TNYKNHVRIH TGEKPYVCTV PGCGKRFTEY SSLYKHHVVH THCKPYTCST BACU018058/1-570 TNYKNHVRIH TGEKPYVCTV PGCGKRFTEY SSLYKHHVVH THCKPYTCST 351 400 ENSTTRP00000008897/1-569 CGKTYRQTST LAMHKRSAHG ELEATEESEQ ALYEQQQLEA ASAAEENPLP ENSBTAP00000008112/1-571 CGKTYRQTST LAMHKRSAHG ELEATEESEQ ALYEQQQLEA ASAAEESPPP ENSP00000363064/1-570 CGKTYRQTST LAMHKRSAHG ELEATEESEQ ALYEQQQLEA ASAAEESPPP bmy_10968T0/1-544 CGKTYRQTST LAMHKRSAHG ELEATEESEQ ALYEQQQLEA ASAAEENPLP BACU018058/1-570 CGKTYRQTST LAMHKRSAHG ELEATEESEQ ALYEQQQLEA ASAAEENPLP 401 450 ENSTTRP00000008897/1-569 KRPRIAYLSE VKEEGDDIPA QVAMVTEEDG APQVALITQD GAQQVSLSPE ENSBTAP00000008112/1-571 KRPHIAYVSE VKEEGDDLPT QVAMVTEEDG APQVALITQD GAQQVSLSPE ENSP00000363064/1-570 KRPRIAYLSE VKEERDDIPA QVAMVTEEDG APQVALITQD GAQQVSLSPE bmy_10968T0/1-544 KRPRIAYLSE VKEEGDDIPA QVAMVTEEDG APQVALITQD GAQQVSLSPE BACU018058/1-570 KRPRIAYLSE VKEEGDDIPA QVAMVTEEDG APQVALITQD GAQQVSLSPE 451 500 ENSTTRP00000008897/1-569 DLQALGSAIS MVTQHGSTTL TIPSHDDDLA TSGTHTVTMV SADGTQTQPV ENSBTAP00000008112/1-571 DLQALGSAIS MVTQHGSTTL AIPSHDDTLA TSGAHTVAMV SADGTQTQPV ENSP00000363064/1-570 DLQALGSAIS MVTQHGSTTL TIPSPDADLA TSGTHTVTMV SADGTQTQPV bmy_10968T0/1-544 DLQALGSAIS MVTQHGSTTL TIPSHDDDLA TSGTHTVTMV SADGTQTQPV BACU018058/1-570 DLQALGSAIS MVTQHGSTTL TIPSHDDDLA TSGTHTVTMV SADGTQTQPV 501 550 ENSTTRP00000008897/1-569 TIITSGTVVA EDSSVASLHH QQVALLATAN GTHIAVQLEE QQ-VEEAISV ENSBTAP00000008112/1-571 TIITSGTVVA EDSSVASLHH QQVALLATAN GTHIAVQLEA QQTLEEAISV ENSP00000363064/1-570 TIITSGAVVA EDSSVASLRH QQVALLATAN GTHIAVQLEE QQTLEEAINV bmy_10968T0/1-544 TIITSGTVVA EDSSVASLHH QQVALLATAN GTHIAVQLEE QQTLEEAISV BACU018058/1-570 TIITSGTVVA EDSSVASLHH QQVALLATAN GTHIAVQLEE QQTLEEAISV 551 600 ENSTTRP00000008897/1-569 ATAVMQQGTV TLETTDSESG C ENSBTAP00000008112/1-571 ATAAMQRGAA TLETAESESS C ENSP00000363064/1-570 ATAAMQQGAV TLETTVSESG C bmy_10968T0/1-544 ATAAMQQGTV TLETTDSESG C BACU018058/1-570 ATAAMQQGTV TLETTDSESG C