KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:34:23 2014 Check: 00 .. Name: bmy_16837T0/1-148 Len: 253 Check: 3858 Weight: 1.00 Name: ENSP00000465075/1-197 Len: 253 Check: 3018 Weight: 1.00 Name: ENSBTAP00000008128/1-197 Len: 253 Check: 1386 Weight: 1.00 Name: BACU002481/1-246 Len: 253 Check: 6560 Weight: 1.00 Name: ENSTTRP00000009017/1-197 Len: 253 Check: 3682 Weight: 1.00 // 1 50 bmy_16837T0/1-148 MGALR--PPS APGL-----S WGARVEGRRL LPALQRSSLR ---------- ENSP00000465075/1-197 MAAFRDIEEV SQGLLSLLGA NRAEAQQRRL LGRHEQVVER LLETQDGAEK ENSBTAP00000008128/1-197 MAAFRDMEEV SQGLLSLLGA NRAEAQQRRL LGRHEQMVER LLETQDGAEK BACU002481/1-246 MAAFRDMEEV SQGLLSLLGA NRAEAQQRRL LRRHEQVVER LLETQD---- ENSTTRP00000009017/1-197 MAAFRDMEEV SQGLLSLLGA NRAEAQQRRL LRRHEQVVER LLETQDGAEQ 51 100 bmy_16837T0/1-148 --------RR RWPRASSTRR SRHTRAALSC SSLKPSFRGP ARKTP----- ENSP00000465075/1-197 QLREILTMEK EVAQSLLNAK EQVHQGGVEL QQLEAGLQEA GEEDTRLKAS ENSBTAP00000008128/1-197 WLREILTAEK EVAQRLLDAK EQAHQGGVEV RQLEAELQRA SEEDAHLKAN BACU002481/1-246 ---EVLTAEK EVAQSLLNAK AEAHQGGVEL QQLEAELQRA SEEDARLKTS ENSTTRP00000009017/1-197 RLREVLTAEK EVAQSLLNAK EQAHQGGAEL QQLEAELQRA SEEDARLKAS 101 150 bmy_16837T0/1-148 ---------- ---------- ---------- ---------- ---------- ENSP00000465075/1-197 LLQ------- ---------- ---------- ---------- ---------- ENSBTAP00000008128/1-197 LLQ------- ---------- ---------- ---------- ---------- BACU002481/1-246 LLYPFLCVQN SRAPASPRRP LFTLENTPGA NSPGPNGVGV STWAALPSKP ENSTTRP00000009017/1-197 LLY------- ---------- ---------- ---------- ---------- 151 200 bmy_16837T0/1-148 ---------L SRELEELKEI EADLERQERE VDEDTTVTIP SAVYVAQLYR ENSP00000465075/1-197 ---------L TRELEELKEI EADLERQEKE VDEDTTVTIP SAVYVAQLYH ENSBTAP00000008128/1-197 ---------L TRELEELKEI EADLERQEKE VDEDTTVTIP SAVYVAQLYR BACU002481/1-246 GVLNCLFTQL SRELEELKEI EADLERQERE VDEDTTVTIP SAVYVAQLYR ENSTTRP00000009017/1-197 ---------L SREREELKEI ETDHERQERE VEEDTTVTIP SAVYVAQLYR 201 250 bmy_16837T0/1-148 RI-------- --------IH HGPSVAQPIH LESTQLSKKF ISDYLWSLVD ENSP00000465075/1-197 QVSKIEWDYE CEPGMVKGIH HGPSVAQPIH LDSTQLSRKF ISDYLWSLVD ENSBTAP00000008128/1-197 RISKIEWDYE CEPGMIKGIH HGPSVAQPIH LDSTQLSKKF ISDYLWNLVD BACU002481/1-246 RISKIEWDYE CEPGMIKGIH HGPSVAQPIH LESTQLSKKF ISDYLWSLVD ENSTTRP00000009017/1-197 RISKIEWDYE CEPGMIKGIH HGPSVAQPIH LDSTQLSKKF ISDYLWSLVD 251 300 bmy_16837T0/1-148 TEW ENSP00000465075/1-197 TEW ENSBTAP00000008128/1-197 TEW BACU002481/1-246 TEW ENSTTRP00000009017/1-197 TEW