KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:34:24 2014 Check: 00 .. Name: ENSTTRP00000008854/1-794 Len: 950 Check: 1597 Weight: 1.00 Name: ENSP00000259154/1-815 Len: 950 Check: 7892 Weight: 1.00 Name: ENSBTAP00000008129/1-818 Len: 950 Check: 3733 Weight: 1.00 Name: bmy_21137T0/1-542 Len: 950 Check: 2285 Weight: 1.00 Name: BACU014467/1-921 Len: 950 Check: 3463 Weight: 1.00 // 1 50 ENSTTRP00000008854/1-794 ---------- ---------- -----NVGGT RFS------- -TSRQTLMWI ENSP00000259154/1-815 ---MAGGHCG SFPAAAAGSG EIVQLNVGGT RFS------- -TSRQTLMWI ENSBTAP00000008129/1-818 ---MAGGHCG SFAAAAAGSG EIVQLNVGGT RFS------- -TSRQTLMWI bmy_21137T0/1-542 ---------- ---------- ---------- ---------- ---------- BACU014467/1-921 MKTPPGRTPL TNRAKYADLP STGHFDEGNS VWAPGYPGNE LQTHAQYAPL 51 100 ENSTTRP00000008854/1-794 PDSFFSSLLS GRISTLRDET -GAIFIDRDP AAFAPILN-- ---------- ENSP00000259154/1-815 PDSFFSSLLS GRISTLRDET -GAIFIDRDP AAFAPILN-- ---------- ENSBTAP00000008129/1-818 PDSFFSSLLS GRISTLRDET -GAIFIDRDP AAFAPILN-- ---------- bmy_21137T0/1-542 ---------- ---------- ---------- ---------- ---------- BACU014467/1-921 LEAFGTRALQ AGLKLLRKSR LQGVSYEADP GEPARPLPET EVEYPCVLPG 101 150 ENSTTRP00000008854/1-794 ---------- ---------- ---------- FLRTKELDL- -----RGVSI ENSP00000259154/1-815 ---------- ---------- ---------- FLRTKELDL- -----RGVSI ENSBTAP00000008129/1-818 ---------- ---------- ---------- FLRTKELDL- -----RGVSI bmy_21137T0/1-542 ---------- ---------- ---------- ---------- ---------- BACU014467/1-921 GGILSIGWHE RITTNLSNKG DDAEQQRFAL YVAINQDDMW LQPLSGGVSI 151 200 ENSTTRP00000008854/1-794 NVLRHEAEFY GITPLVRRLL LCEELERSSC GSVLFHGYLP PPGIPSRKIN ENSP00000259154/1-815 NVLRHEAEFY GITPLVRRLL LCEELERSSC GSVLFHGYLP PPGIPSRKIN ENSBTAP00000008129/1-818 NVLRHEAEFY GITPLVRRLL LCEELERSSC GSVLFHGYLP PPGIPSRKIN bmy_21137T0/1-542 ---------- ---------- ---------- ---------- ---------- BACU014467/1-921 NVLRHEAEFY GITPL----- ---------- ---------- --GIPSRKIN 201 250 ENSTTRP00000008854/1-794 NTTRSSADSR NGLNFTEGEA RGNGTQPVIS GAGEETVRLG FPVHPRKVLI ENSP00000259154/1-815 NTVR-SADSR NGLNSTEGEA RGNGTQPVLS GTGEETVRLG FPVDPRKVLI ENSBTAP00000008129/1-818 NTTRSSADSR NGLNFTEGEA RGNGTQPVLS GTGEETVRLG FPVDPRKVLI bmy_21137T0/1-542 ---------- ---------- ---------- ---------- ---------- BACU014467/1-921 NTTRSSADSR NGLNFTEGEA RGNGTQPVLS GTGEETVRLG FPVDPRKVLI 251 300 ENSTTRP00000008854/1-794 VAGXXXXXXX XXXXXXXXXX IKESSGWQQV FTSPYLDWTI ERVALNAKVV ENSP00000259154/1-815 VAGHHNWIVA AYAHFAVCYR IKESSGWQQV FTSPYLDWTI ERVALNAKVV ENSBTAP00000008129/1-818 VAGHHNWIVA AYAHFAVCYR IKESSGWQQV FTSPYLDWTI ERVALNAKVV bmy_21137T0/1-542 ---------- ---------- ---------- ---------- ---------- BACU014467/1-921 VAGHHNWIVA AYAHFAVCYR IKESSGWQQV FTSPYLDWTI ERVALNAKVV 301 350 ENSTTRP00000008854/1-794 GGPHGDKDKM VAVASESSII LWSVQDGGSG SEIGVFSLGV PVDALFFIGN ENSP00000259154/1-815 GGPHGDKDKM VAVASESSII LWSVQDGGSG SEIGVFSLGV PVDALFFIGN ENSBTAP00000008129/1-818 GGPHGDKDKM VAVASESSII LWSVQDGGSG SEIGVFSLGV PVDALFFIGN bmy_21137T0/1-542 ---------- ---------- ---------- ----VFSLGV PVDALFFIGN BACU014467/1-921 GGPHGDKDKM VAVASESSII LWSVQDGGSG SEIGVFSLGV PVDALFFIGN 351 400 ENSTTRP00000008854/1-794 QLVATSHTGK VGVWNAVTQH WQ-------- ---------- ---------- ENSP00000259154/1-815 QLVATSHTGK VGVWNAVTQH WQ-------- ---------- ---------- ENSBTAP00000008129/1-818 QLVATSHTGK VGVWNAVTQH WQ-------- ---------- ---------- bmy_21137T0/1-542 QLVATSHTGK VGVWNAVTQH WQ-------- ---------- ---------- BACU014467/1-921 QLVATSHTGK VGVWNAVTQH WQCSAELGCN ETSVSDLQTS ADSSDLRLAA 401 450 ENSTTRP00000008854/1-794 ---------- ---------- ---------- ---------- ----VQDVVP ENSP00000259154/1-815 ---------- ---------- ---------- ---------- ----VQDVVP ENSBTAP00000008129/1-818 ---------- ---------- ---------- ---------- ----VQDVVP bmy_21137T0/1-542 ---------- ---------- ---------- ---------- ----VQDVVP BACU014467/1-921 VALDERVLLW PLATVLPVSD TDGNRGEVFS GEYESREDYL FKEMVQDVVP 451 500 ENSTTRP00000008854/1-794 ITSYDTAGSF LLLGCNNGSI YYIDMQKFPL RMKDNDLLVT ELYHDPSNDA ENSP00000259154/1-815 ITSYDTAGSF LLLGCNNGSI YYIDMQKFPL RMKDNDLLVT ELYHDPSNDA ENSBTAP00000008129/1-818 ITSYDTAGSF LLLGCNNGSI YYIDMQKFPL RMKDNDLLVT ELYHDSSNDA bmy_21137T0/1-542 ITSYDTAGSF LLLGCNNGSI YYIDMQKFPL RMKDNDLLVT ELYHDPSNDA BACU014467/1-921 ITSYDTAGSF LLLGCNNGSI YYIDMQKFPL RMKDNDLLVT ELYHDPSNDA 501 550 ENSTTRP00000008854/1-794 ITALSVYLTP KTSVSGNWIE IAYGTSSGAV RVIVQHPETV GSGPQLFQTF ENSP00000259154/1-815 ITALSVYLTP KTSVSGNWIE IAYGTSSGAV RVIVQHPETV GSGPQLFQTF ENSBTAP00000008129/1-818 ITALSVYLTP KTSVSGNWIE IAYGTSSGAV RVIVQHPETV GSGPQLFQTF bmy_21137T0/1-542 ITALSVYLTP KTSVSGNWIE IAYGTSSGAV RVIVQHPETV GSGPQLFQTF BACU014467/1-921 ITALSVYLTP KTSVSGNWIE IAYGTSSGAV RVIVQHPETV GSGPQLFQTF 551 600 ENSTTRP00000008854/1-794 TVHRSPVTKI MLSEKHLVSV CADNNHVRTW TVTRFRGMIS TQPGSTPLAS ENSP00000259154/1-815 TVHRSPVTKI MLSEKHLVSV CADNNHVRTW TVTRFRGMIS TQPGSTPLAS ENSBTAP00000008129/1-818 TVHRSPVTKI MLSEKHLVSV CADNNHVRTW TVTRFRGMIS TQPGSTPLAS bmy_21137T0/1-542 TVHRSPVTKI MLSEKHLVSV CADNNHVRTW TVTRFRGMIS TQPGSTPLAS BACU014467/1-921 TVHRSPVTKI MLSEKHLVSV CADNNHVRTW TVTRFRGMIS TQPGSTPLAS 601 650 ENSTTRP00000008854/1-794 FKILSLEETE SHGSYSSGND I--GPFGERD DQQVFIQKVV PITNKLFVRL ENSP00000259154/1-815 FKILSLEETE SHGSYSSGND I--GPFGERD DQQVFIQKVV PITNKLFVRL ENSBTAP00000008129/1-818 FKILSLEETE SHGSYSSGND IDEGPFGERD DQQVFIQKVV PITNKLFVRL bmy_21137T0/1-542 FKILSLEETE SHGSYSSGND I--GPFGERD DQQVFIQKVV PITNKLFVRL BACU014467/1-921 FKILSLEETE SHGSYSSGND I--GPFGERD DQQVFIQKVV PITNKLFVRL 651 700 ENSTTRP00000008854/1-794 SSTGKRICEI QAVDCTTISS FTVRECEGSS RMGSRPRRYL FTGHTNGSIQ ENSP00000259154/1-815 SSTGKRICEI QAVDCTTISS FTVRECEGSS RMGSRPRRYL FTGHTNGSIQ ENSBTAP00000008129/1-818 SSTGKRICEI QAVDCTTISS FTVRECEGSS RMGSRPRRYL FTGHTNGSIQ bmy_21137T0/1-542 SSTGKRICEI QAVDCTTISS FTVRECEGSS RMGSRPRRYL FTGHTNGSIQ BACU014467/1-921 SSTGKRICEI QAVDCTTISS FTVRECEGSS RMGSRPRRYL FTGHTNGSIQ 701 750 ENSTTRP00000008854/1-794 MWDLTTAMDM VNKSEDKDVG GPTEEELLKL LDQCDLSTSR CATPNISPAT ENSP00000259154/1-815 MWDLTTAMDM VNKSEDKDVG GPTEEELLKL LDQCDLSTSR CATPNISPAT ENSBTAP00000008129/1-818 MWDLTTAMDM VNKSEDKDVG GPTEEELLKL LDQCDLSTSR CATPNISPAT bmy_21137T0/1-542 MWDLTTAMDM VNKSEDKDVG GPTEEELLKL LDQCDLSTSR CATPNISPAT BACU014467/1-921 MWDLTTAMDM VNKSEDKDVG GPTEEELLKL LDQCDLSTSR CATPNISPAT 751 800 ENSTTRP00000008854/1-794 SVVQHSRLRE SNSSLQLQHH ETIHEAATYG SMRPYRESPL LXXXXXXXXX ENSP00000259154/1-815 SVVQHSHLRE SNSSLQLQHH DTTHEAATYG SMRPYRESPL LARARRTESF ENSBTAP00000008129/1-818 SVVQHSRLRE SSSSLQLQHH ETIHEAATYG SIRPYRESPL LARARRTESF bmy_21137T0/1-542 SVVQHSRLRE SNSSLQLQHH ETIHEAATYG SMRPYRESPL LARARRTESF BACU014467/1-921 SVVQHSRLRE SNSSLQLQHH ETIHEAATYG SMRPYRESPL LARARRTESF 801 850 ENSTTRP00000008854/1-794 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000259154/1-815 HSYRDFQTIN LNRNVERAVP ENGNLGPIQA EVKGATGECN ISERKSPGVE ENSBTAP00000008129/1-818 HSYRDFQTVN LNRNIERAVP ENGNLGPIQA EVKRAAGECN VSERKSPGTE bmy_21137T0/1-542 HSYRDFQTVN LNRNVERAVP ENGNLGPIQA EVKRATGECN VYERKSPGTE BACU014467/1-921 HSYRDFQTVN LNRNVERAVP ENGNLGPIQA EVKRATGECN VYERKSPGTE 851 900 ENSTTRP00000008854/1-794 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXEGGGFL ENSP00000259154/1-815 IKSLRELDSG LEVHKIAEGF SESKKRSSED ENENKIEFRK KGGFEGGGFL ENSBTAP00000008129/1-818 VKSLRESDSV VEVHRLAEGF LESKKRSSED ENENKVESRK KGGFEGGGFL bmy_21137T0/1-542 VKSLRESDSG VEVHKIAEGF LEPKKKSSED ENENKVELRK KGGFEGGGFL BACU014467/1-921 VKSLRESDSG VEVHKIAEGF LEPKKRSSED ENENKVELRK KGGFEGGGFL 901 950 ENSTTRP00000008854/1-794 GRKKVPHLAS SPSTSDGGTD SPGTASPSPT KTTPSPRHKK SDSSGQEYSL ENSP00000259154/1-815 GRKKVPYLAS SPSTSDGGTD SPGTASPSPT KTTPSPRHKK SDSSGQEYSL ENSBTAP00000008129/1-818 GRKKVPHLAS SPSTSDGGTD SPGTASPSPT KTAPSPRHKK SDSSGQEYSL bmy_21137T0/1-542 GRKKVPHLAS SPSTSDGGTD SPGTASPSPT KTTPSPRHKK SDSSGQEYSL BACU014467/1-921 GRKKVPHLAS SPSTSDGGTD SPGTASPSPT KTTPSPRHKK SDSSGQEYSL