KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:34:25 2014 Check: 00 .. Name: ENSP00000256458/1-625 Len: 635 Check: 8334 Weight: 1.00 Name: ENSBTAP00000008135/1-621 Len: 635 Check: 9393 Weight: 1.00 Name: ENSTTRP00000007151/1-560 Len: 635 Check: 4087 Weight: 1.00 Name: bmy_00433T0/1-533 Len: 635 Check: 7515 Weight: 1.00 Name: BACU015170/1-621 Len: 635 Check: 5952 Weight: 1.00 // 1 50 ENSP00000256458/1-625 MACYIYQLPS WVLDDLCRNM DALSEWDWME FASYVITDLT QLRKIKSMER ENSBTAP00000008135/1-621 MSCYIYQLPS WVLDDLCRNM DTLSEWDWMQ FASYVITDLT QLRKIKSMER ENSTTRP00000007151/1-560 MSCYIYQLPA WVLDDLCRNM DALSEWDWMQ FG-------- ---------- bmy_00433T0/1-533 ---------- ---------- ---------- ---------- ---------- BACU015170/1-621 MSCYIYQLPS WVLDDLCRNM DALSEWDWMQ FASYVITDLT QLRKIKSMER 51 100 ENSP00000256458/1-625 VQGVSITREL LWWWGMRQAT VQQLVDLLCR LELYRAAQII LNWKPAPEIR ENSBTAP00000008135/1-621 AQGVSITREL LWWWGMRQAT VQQLLDLLCH LELYRAAQII LNWKPVLEVK ENSTTRP00000007151/1-560 ---------- ---------- ---------- ---------- ---QSVPEIK bmy_00433T0/1-533 ---------- ---------- ---------- ---------- --------MK BACU015170/1-621 AQGVSITREL LWWWSMRQAT VQQLLDLLCH LELYRAAQII LNWKSVPEIK 101 150 ENSP00000256458/1-625 CPIPAFPDSV KPEKPLAASV RKAEDEQEEG QPVRMATFPG PGSSPARAHQ ENSBTAP00000008135/1-621 SSIPDFSDTV KPGKPLAASV RNTEDKQETG QPVRPPTFPG SGPAAVRVNL ENSTTRP00000007151/1-560 SSIPDFLDTV KPGKPLAASV RNADDEQETE QPMRPATFPG PGPAPARASP bmy_00433T0/1-533 SSIPDFLDTV KPGKPLAASV RNAEDEQETE QPMRPATFPG PGPAPARASL BACU015170/1-621 SSIPDFLDTV KPGKPLAASV RNAEDEQETE QPMRPATFPG PGPAPARASL 151 200 ENSP00000256458/1-625 PAFLQPPEED APHSLRSDLP TSSDSKDFST SIPKQEKLLS LAGDSLFWSE ENSBTAP00000008135/1-621 PA----PPED ASSSLKTNQT ASADSKDFSA SIPKQETLSS LAGDDLFWSE ENSTTRP00000007151/1-560 WG----PAED ASPSVNTDLP ASSDSKDFST SIPKQETLLS LADDSLFWSE bmy_00433T0/1-533 RG----PAED ASPSVKTDLP ASSDSKDFST SIPKQETLLS LADDSLFWSE BACU015170/1-621 PG----PAED ASPSVKTDLP ASSDSKDFST SIPKQETLLS LADDSLFWSE 201 250 ENSP00000256458/1-625 ADVVQATDDF NQNRKISQGT FADVYRGHRH GKPFVFKKLR ETACS----- ENSBTAP00000008135/1-621 VDVIQATDNF NPSHKISEGT FADVYRGHKR GTPFIFKKLR EMACS----- ENSTTRP00000007151/1-560 VDVVQATDNF NPNHKISEGT FADIYRGQRL GTPFIFKKLR EVPCS----- bmy_00433T0/1-533 VDVVQATDNF NPNHKISEGT FADIYRGQRL GTPFVFKKLR EVGSSWFPVR BACU015170/1-621 VDVVQATDNF SPNCKIGEGT FADIYRGQRL GTPFVFKKLR EMACS----- 251 300 ENSP00000256458/1-625 -SPGSIERFF QAELQICL-- --RCCHPNVL PVLGFCAARQ FHSFIYPYMA ENSBTAP00000008135/1-621 -GPGSVEKFF QAEVQICR-- --RCCHPNVL PLLGCCTGEQ FYSLIYPYMA ENSTTRP00000007151/1-560 -GPGTIEKFF QVEVQICR-- --RCCHPNVL PLLGLCTGEQ FYSLIYPYMA bmy_00433T0/1-533 GGDYMVRLDF HVSVSFPTDG LFRCCHPNVL PLLGLCTGKQ FYSLIYPYMA BACU015170/1-621 -GPGSIENFF QAEVQICR-- --RCCHPNVL PLLGLCTGKQ FYSLIYPYMA 301 350 ENSP00000256458/1-625 NGSLQDRLQG QGGSDPLPWP QRVSICSGLL CAVEYLHGLE IIHSNVKSSN ENSBTAP00000008135/1-621 NGSLQDRLQG QGGSDPLPWP QRISICSGLL HAVEHLHSLE IIHGNVKSSN ENSTTRP00000007151/1-560 NGSLQDRLQG QGGSDPLPWP QRVVICSGLL HAVEHLHGLE IIHGNVKSSN bmy_00433T0/1-533 NGSLQDRLQG QGGSDPLPWP QRVIVCSGLL HAVEHLHGLE IIHGNVKSSN BACU015170/1-621 NGSLQDRLQG QGGSDPLPWP QRVIICSGLL HAVEHLHGLE IIHGNVKSSN 351 400 ENSP00000256458/1-625 VLLDQNLTPK LAHPMAHLCP VNKRSKYTMM KTHLLRTSAA YLPEDFIRVG ENSBTAP00000008135/1-621 VLLDQNFTPK LAHSMAHPCP VNRTSKYTMM KTHLFQASTA YLPEDFIRVG ENSTTRP00000007151/1-560 VLLDQNFTPK LAHSMAHWCP VNKKSKYTTV KTRLFQASTA YLPEDFIRVG bmy_00433T0/1-533 VLLDQNFTPK LAHSMAHWCP VNKKSKYTAM KTCLFQASAA YLPEDFIRVG BACU015170/1-621 VLLDQNFTPK LAHSMAHWCP VNKKSKYTAM KTCLFQASAA YLPEDFIRVG 401 450 ENSP00000256458/1-625 QLTKRVDIFS CGIVLAEVLT GIPAMDNNRS PVYLKDLLLS DIPSSTASLC ENSBTAP00000008135/1-621 QLTKRVDIFS CGIVLAEVLT GIPAMDNNRN PVYLKDLLLH EIPSSTISLC ENSTTRP00000007151/1-560 QLTKRVDIFG CGIVLAEVLT GIPAMDDKRS PVYLKDLLLS EIPSSTTRLC bmy_00433T0/1-533 QLTKRVDIFG CGIVLAEVLT GIPAMDKDRS PVYLKDLLLS EIPSSTTWLC BACU015170/1-621 QLTKRVDIFG CGIVLAEVLT GIPAMDKDRS PVYLKDLLLS EIPSSTTWLC 451 500 ENSP00000256458/1-625 SRKTGVENVM AKEICQKYLE KGAGRLPEDC AEALATAACL CLRRRNTSLQ ENSBTAP00000008135/1-621 SRKMGVEKEM AKEICQKYLE KRAGRLPEAH AEALVMAACL CLRRRNASLA ENSTTRP00000007151/1-560 SSKTDVEKVM AKEICQNYLE KRAGRLPEAC AEALAMAACL CLRRRNASLA bmy_00433T0/1-533 SRKTGVEKVM AKEICQKYLE KRAGRLPEAC AEALATAACL CLRRRNASLA BACU015170/1-621 SRKTGVEKVM AKEICQKYLE KRAGRLPAAC AEALATAACL CLRRRNASLA 501 550 ENSP00000256458/1-625 EVCGSVAAVE ERLRGRETLL PWSGLSEGTG SSSNTPEETD DVDNSSLDAS ENSBTAP00000008135/1-621 EVCSSVAAVE EQLRGQETSL PCSGLSEGTG SSFNTPEETD DVDNSSFDGS ENSTTRP00000007151/1-560 EVCGSVAAVE EQLRGQETSL PWSGLSECTG SSSNTPEETD DVDNSSFEAS bmy_00433T0/1-533 EVCGSVAAVE EQLRGQETSL PWSGLSEHTG SSSNTPEETD DVDNSSFEAS BACU015170/1-621 EVCGSVAAVE EQLRGQETSL PWSGLSEHTG SSSNTPEETD DVDNSSFEAS 551 600 ENSP00000256458/1-625 SSMSVAPWAG AATPLLPTEN GEGRLRVIVG READSSSEAC VGLEPPQDVT ENSBTAP00000008135/1-621 YSMRAAPWAG ATSSPPLTAD EEGMLLAGGA VEADSSAEAC APPEPPQDAT ENSTTRP00000007151/1-560 CCMREAPWAG AAYSPPRPAD GESELPAGGA VEADSSSEAC ASAEPPQDAT bmy_00433T0/1-533 CSMREAPWAG AAASRPPPAD GESELPAGGA VEADSSSEAR ASPEPPQDAT BACU015170/1-621 CSMREAPWAG AAASRPPPAD GESELPAGGA VEADSSSEAR ASPEPPQDAT 601 650 ENSP00000256458/1-625 ETSWQIEINE AKRKLMENIL LYKEEKVDSI ELFGP ENSBTAP00000008135/1-621 ETSWKIEINE AKRKLMENIL LYKEEKLDSI ELFGP ENSTTRP00000007151/1-560 ETSWKIEINE AKKKLMENIR LYKEEKLDSI ELFGP bmy_00433T0/1-533 ETSWKIEINE AKKKLMENIR LYREENLDSI ELFGP BACU015170/1-621 ETSWKIEINE AKKKLMENIR LYKEEKLDSI ELFGP