KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:34:25 2014 Check: 00 .. Name: ENSP00000398350/1-293 Len: 293 Check: 5361 Weight: 1.00 Name: ENSTTRP00000008348/1-251 Len: 293 Check: 5746 Weight: 1.00 Name: bmy_10242T0/1-222 Len: 293 Check: 1307 Weight: 1.00 Name: ENSBTAP00000008137/1-292 Len: 293 Check: 4569 Weight: 1.00 // 1 50 ENSP00000398350/1-293 MAAAAAAAVA GVGRGGGGAE PRQERSRARG WAGVERSEGR SRMEPGEELE ENSTTRP00000008348/1-251 ---------- ---------- ---------- ---------- --MEPGEELE bmy_10242T0/1-222 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000008137/1-292 MAAAAAAVAG AGRGGGGGAE PRQERSRARG WAGAERSEGR -RMEPGEELE 51 100 ENSP00000398350/1-293 EEGSPGGRED GFTAEHLAAE AMAADMDPWL VFDARTTPAT ELDAWLAKYP ENSTTRP00000008348/1-251 DEDSPGGRED GFTAEHLAAE AMAADMDPWL VFDARTTPAT ELDAWLAKYP bmy_10242T0/1-222 ---------- ---------- -MAADMDPWL VFDARTTPAT ELDAWLAKYP ENSBTAP00000008137/1-292 EEDSPGGRED GFTAEHLAAE AMAADMDPWL VFDARMTPAT ELDAWLAKYP 101 150 ENSP00000398350/1-293 PSQVTRYGDP GSPNSEPVGW IAVYGQGYSP NSGDVQGLQA AWEALQTSGR ENSTTRP00000008348/1-251 PSQVTRYGDP GSPNSEPVGW IAAYGQGYVP NSGDVQGLQV AWEALQTSGR bmy_10242T0/1-222 PSQVTRYGDP GSPNSEPVGW IAAYGQGYVP NSGDVQGLQA AWEALQTSGR ENSBTAP00000008137/1-292 PSQVTRYGDP GSPNSEPVGW IAAYGQGYIP NSGDVQGLQA AWEALQTSGR 151 200 ENSP00000398350/1-293 PITPGTLRQL AITHHVLSGK WLMHLAPGFK LDHAWAGIAR AVVEGQLQVA ENSTTRP00000008348/1-251 PITPGTLRQL AITHQVLSGK WLIHLAPGFK LDHAWAGIAR AVVEGRLQVA bmy_10242T0/1-222 PVTPGTLRQL AITHQVLSGK WLIHLAPGFK LDHAWAGIAR AVVEGRLQVA ENSBTAP00000008137/1-292 PVTPGTLRQL AITHQVLSGK WLIHLAPGFK LDHAWAGIAR AVVEGRLQVA 201 250 ENSP00000398350/1-293 KVSPRAKEGG RQVICVYTDD FTDRLGVLEA DSAIRAAGIK CLLTYKPDVY ENSTTRP00000008348/1-251 KVSPRAKEGG RQVICVYTDD FTDRLGVLEA DAAIRAAGVK CLLTYKPDVY bmy_10242T0/1-222 KVSPRAKEGG RQVICVYTDD FTDRLGVLEA DAAIRAAGIK CLLTYKPDVY ENSBTAP00000008137/1-292 KVSPRAKEGG RQVICVYTDD FTDRLGVLEA DAAIRAAGVK CLLTYKPDVY 251 300 ENSP00000398350/1-293 TYLGIYRANR WHLCPTLYES RFQLGGSARG SRVLDRANNV ELT ENSTTRP00000008348/1-251 TYLGIYRANR WHLCPTLYES RFQLGGSTRG SRVLDRANNV ELT bmy_10242T0/1-222 TYLGIYRANR WHLCPTLYES RFQLGGSARG SRVLDRANNV ELT ENSBTAP00000008137/1-292 TYLGIYRANR WHLCPTLYES RFQLGGSARG SRVLDRANNV ELT