KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:34:25 2014 Check: 00 .. Name: BACU006588/1-173 Len: 265 Check: 507 Weight: 1.00 Name: bmy_13590T0/1-136 Len: 265 Check: 9600 Weight: 1.00 Name: ENSP00000370303/1-265 Len: 265 Check: 7478 Weight: 1.00 Name: ENSBTAP00000008139/1-265 Len: 265 Check: 6013 Weight: 1.00 Name: ENSTTRP00000007602/1-265 Len: 265 Check: 5621 Weight: 1.00 // 1 50 BACU006588/1-173 ---------- ---------- -MVW------ ---------- ---------- bmy_13590T0/1-136 MGLRIHFVVD PH-------- ---------- ---------- ---------- ENSP00000370303/1-265 MGLRIHFVVD PHGWCCMGLI VFVWLYNIVL IPKIVLFPHY EEGHIPGILI ENSBTAP00000008139/1-265 MGLRIHFVVD PHGWCCMGLI VFVWLYNFFL IPKIVLFPHY EEGHIPGILI ENSTTRP00000007602/1-265 MGLRIHFVAD PHGWCCMGLI VFVWLYNFVL IPKIVLFPHY EEGHIPGILI 51 100 BACU006588/1-173 ---------- ---------K EEESVGRAGK VAAGEGG--- ---------- bmy_13590T0/1-136 -VFYGIAIFC LVALVRASIT DPGRLPENPK IPHGEREFWE LCNKCNLMRP ENSP00000370303/1-265 IIFYGISIFC LVALVRASIT DPGRLPENPK IPHGEREFWE LCNKCNLMRP ENSBTAP00000008139/1-265 IIFYGIAMFC LVALVRASIT DPGRLPENPK IPHGEREFWE LCNKCNLMRP ENSTTRP00000007602/1-265 IIFYGIAIFC LVALVRASIT DPGRLPENPK IPHGEREFWE LCNKCNLMRP 101 150 BACU006588/1-173 ---------G AEVRQE---- PRINNCVGED NHWLFLQLCF YTELLTCYAL bmy_13590T0/1-136 KRSHHCSRCG HCVRRMDHHC PWINNCVGED NHWLFLQLCF YTELLTCYAL ENSP00000370303/1-265 KRSHHCSRCG HCVRRMDHHC PWINNCVGED NHWLFLQLCF YTELLTCYAL ENSBTAP00000008139/1-265 KRSHHCSRCG HCVRRMDHHC PWINNCVGED NHWLFLQLCF YTELLTCYAL ENSTTRP00000007602/1-265 KRSHHCSRCG HCVRRMDHHC PWINNCVGED NHWLFLQLCF YTELLTCYAL 151 200 BACU006588/1-173 MFSFFHYYYF LPLKKRNLDL FVVRHELAIM RLAAFMGVTM LVGITGLFYT bmy_13590T0/1-136 MFSFFHYYYF LPLKKRNL-- ---------- ---------- ---VRNVYIN ENSP00000370303/1-265 MFSFCHYYYF LPLKKRNLDL FVFRHELAIM RLAAFMGITM LVGITGLFYT ENSBTAP00000008139/1-265 MFSFCHYYYF LPLKKRNLDL FVVRHELAIM RLAAFMGITM LVGITGLFYT ENSTTRP00000007602/1-265 MFSFCHYYYF LPLKKHNLDL FVVRHELAIM RLAAFMGITM FVGITGLFYT 201 250 BACU006588/1-173 QLIGIITDTT SIEKMSNCCE EISRPRKPWQ QTFSEVFGTR WKILWFIPFR bmy_13590T0/1-136 ---------- ---------- ---------- ---------- ---------- ENSP00000370303/1-265 QLIGIITDTT SIEKMSNCCE DISRPRKPWQ QTFSEVFGTR WKILWFIPFR ENSBTAP00000008139/1-265 QLIGIITDTT SIEKMSNCCE EISRPRKPWQ QTFSEVFGTR WKILWFIPFR ENSTTRP00000007602/1-265 QLIGIITDTT SIEKMSNCCE EISRPRKPWQ QTFSEVFGTR WKILWFIPFR 251 300 BACU006588/1-173 QRQPLRVPYH FANHV bmy_13590T0/1-136 ---------- ----- ENSP00000370303/1-265 QRQPLRVPYH FANHV ENSBTAP00000008139/1-265 RRQPLRVPYH FANHV ENSTTRP00000007602/1-265 QRQPLRVPYH FANHV