KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:34:29 2014 Check: 00 .. Name: bmy_14934T0/1-413 Len: 746 Check: 4574 Weight: 1.00 Name: BACU013197/1-420 Len: 746 Check: 3150 Weight: 1.00 Name: ENSBTAP00000008154/1-746 Len: 746 Check: 2750 Weight: 1.00 Name: ENSTTRP00000013744/1-746 Len: 746 Check: 2763 Weight: 1.00 Name: ENSP00000367446/1-746 Len: 746 Check: 2365 Weight: 1.00 // 1 50 bmy_14934T0/1-413 ---------- ---------- ---------- ---------- ---------- BACU013197/1-420 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000008154/1-746 MQAKKRYFIL LSAGSCLALL FYFGGLQFRA SRSHSRREEH SGRNGLHHPS ENSTTRP00000013744/1-746 MQAKKRYFIL LSAGSCLALL FYFGGLQFRA SRSHSRREEH SRRNGLHHPS ENSP00000367446/1-746 MQAKKRYFIL LSAGSCLALL FYFGGLQFRA SRSHSRREEH SGRNGLHHPS 51 100 bmy_14934T0/1-413 ---------- ---------- ---------- ---------- ---------- BACU013197/1-420 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000008154/1-746 PDHFWPRFPD ALRPFVPWDQ LENEDSSVHV SPRQKREANS SIYKGKKCRM ENSTTRP00000013744/1-746 PDHFWPRFPD ALRPFVPWDQ LENEDSSVHI SPRQKRDANS SIYKGKKCRM ENSP00000367446/1-746 PDHFWPRFPD ALRPFVPWDQ LENEDSSVHI SPRQKRDANS SIYKGKKCRM 101 150 bmy_14934T0/1-413 ---------- ---------- ---------- ---------- ---------- BACU013197/1-420 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000008154/1-746 ESCFDFTLCK KNGFKVYVYP QQKGEKIAES YQNILAAIEG SRFYTSDPSQ ENSTTRP00000013744/1-746 ESCFDFTLCK KNGFKVYVYP QQKGEKIAES YQNILAAIEG SRFYTSDPSQ ENSP00000367446/1-746 ESCFDFTLCK KNGFKVYVYP QQKGEKIAES YQNILAAIEG SRFYTSDPSQ 151 200 bmy_14934T0/1-413 ---------- ---------- ---------- ---------- ---------- BACU013197/1-420 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000008154/1-746 ACLFVLSLDT LDRDQLSPQY VHNLRSKVQS LHLWNNGRNH LIFNLYSGTW ENSTTRP00000013744/1-746 ACLFVLSLDT LDRDQLSPQY VHNLRSKVQS LHLWNSGRNH LIFNLYSGTW ENSP00000367446/1-746 ACLFVLSLDT LDRDQLSPQY VHNLRSKVQS LHLWNNGRNH LIFNLYSGTW 201 250 bmy_14934T0/1-413 ---MEEVGIN CCR------- ---------- ---------- -PRLTGSRNF BACU013197/1-420 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000008154/1-746 PDYTEDVGFD IGQAMLAKAS ISTENFRPNF DVSIPLFSKD HPRTGGERGF ENSTTRP00000013744/1-746 PDYTEDVGFD IGQAMLAKAS ISTENFRPNF DVSIPLFSKD HPRTGGERGF ENSP00000367446/1-746 PDYTEDVGFD IGQAMLAKAS ISTENFRPNF DVSIPLFSKD HPRTGGERGF 251 300 bmy_14934T0/1-413 FR----NTYD NFII------ ---------- RKIVDIQTLS TVELEDTCQL BACU013197/1-420 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000008154/1-746 LKFNTIPPLR KYMLVFKGKR YLTGIGSDTR NALYHVHNGE DVVLLTTCKH ENSTTRP00000013744/1-746 LKFNTIPPLR KYMLVFKGKR YLTGIGSDTR NALYHVHNGE DVVLLTTCKH ENSP00000367446/1-746 LKFNTIPPLR KYMLVFKGKR YLTGIGSDTR NALYHVHNGE DVVLLTTCKH 301 350 bmy_14934T0/1-413 ---------- ------FPYV WYDYREMLHN ATFCLVPRGR RLGSFRFLEA BACU013197/1-420 ---------- ---------- ------MLHN ATFCLVPRGR RLGSFRFLEA ENSBTAP00000008154/1-746 GKDWQKHKDS RCDRDNTEYE KYDYREMLHN ATFCLVPRGR RLGSFRFLEA ENSTTRP00000013744/1-746 GKDWQKHKDS RCDRDNTEYE KYDYREMLHN ATFCLVPRGR RLGSFRFLEA ENSP00000367446/1-746 GKDWQKHKDS RCDRDNTEYE KYDYREMLHN ATFCLVPRGR RLGSFRFLEA 351 400 bmy_14934T0/1-413 ---------- ---------- ---------- ------LQIP STIRSIHQDK BACU013197/1-420 LQAACVPVML SNGWELPFSE VINWNQAAVI GDERLLLQIP STIRSIHQDK ENSBTAP00000008154/1-746 LQAACVPVML SNGWELPFSE VINWNQAAVI GDERLLLQIP STIRSIHQDK ENSTTRP00000013744/1-746 LQAACVPVML SNGWELPFSE VINWNQAAVI GDERLLLQIP STIRSIHQDK ENSP00000367446/1-746 LQAACVPVML SNGWELPFSE VINWNQAAVI GDERLLLQIP STIRSIHQDK 401 450 bmy_14934T0/1-413 ILALRQQTQF LWEAYFSSVE KIVLTTLEII QDRIFKHISR NSLIWNKHPG BACU013197/1-420 ILALRQQTQF LWEAYFSSVE KIVLTTLEII QDRIFKHISR NSLIWNKHPG ENSBTAP00000008154/1-746 ILALRQQTQF LWEAYFSSVE KIVLTTLEII QDRIFKHISR NSLIWNKHPG ENSTTRP00000013744/1-746 ILALRQQTQF LWEAYFSSVE KIVLTTLEII QDRIFKHISR NSLIWNKHPG ENSP00000367446/1-746 ILALRQQTQF LWEAYFSSVE KIVLTTLEII QDRIFKHISR NSLIWNKHPG 451 500 bmy_14934T0/1-413 GLFVLPQYSS YLGDFPYYYA NLGLKPPSKF TAVIHAVTPL VSQSQPVLKL BACU013197/1-420 GLFVLPQYSS YLGDFPYYYA NLGLKPPSKF TAVIHAVTPL VSQSQPVLKL ENSBTAP00000008154/1-746 GLFVLPQYSS YLGDFPYYYA NLGLKPPSKF TAVIHAVTPL VSQSQPVLKL ENSTTRP00000013744/1-746 GLFVLPQYSS YLGDFPYYYA NLGLKPPSKF TAVIHAVTPL VSQSQPVLKL ENSP00000367446/1-746 GLFVLPQYSS YLGDFPYYYA NLGLKPPSKF TAVIHAVTPL VSQSQPVLKL 501 550 bmy_14934T0/1-413 LVAAARSQYC AQIIVLWNCD KPLPAKHRWP ATAVPVIVIE GESK------ BACU013197/1-420 LVAAARSQYC AQIIVLWNCD KPLPAKHRWP ATAVPVIVIE GESKVMSSRF ENSBTAP00000008154/1-746 LVAAAKSQYC AQIIVLWNCD KPLPAKHRWP ATSVPVIVIE GESKVMSSRF ENSTTRP00000013744/1-746 LVAAAKSQYC AQIIVLWNCD KPLPAKHRWP ATAVPVIVIE GESKVMSSRF ENSP00000367446/1-746 LVAAAKSQYC AQIIVLWNCD KPLPAKHRWP ATAVPVVVIE GESKVMSSRF 551 600 bmy_14934T0/1-413 ---------- ---------- ----VDFAFT VWQSFPERIV GYPARSHFWD BACU013197/1-420 LPYDNIVTDA VLSLDEDTVL STTEVDFAFT VWQSFPERIV GYPARSHFWD ENSBTAP00000008154/1-746 LPYDNIITDA VLSLDEDTVL STTEVDFAFT VWQSFPERIV GYPARSHFWD ENSTTRP00000013744/1-746 LPYDNIITDA VLSLDEDTVL STTEVDFAFT VWQSFPERIV GYPARSHFWD ENSP00000367446/1-746 LPYDNIITDA VLSLDEDTVL STTEVDFAFT VWQSFPERIV GYPARSHFWD 601 650 bmy_14934T0/1-413 NSKERWGYTS KWTNDYSMVL TGAALYHKYY HYLYTHYLPA SLKNMVDQLA BACU013197/1-420 NSKERWGYTS KWTNDYSMVL TGAALYHKYY HYLYTHYLPA SLKNMVDQLA ENSBTAP00000008154/1-746 NSKERWGYTS KWTNDYSMVL TGAAIYHKYY HYLYTHYLPA SLKNMVDQLA ENSTTRP00000013744/1-746 NSKERWGYTS KWTNDYSMVL TGAALYHKYY HYLYTHYLPA SLKNMVDQLA ENSP00000367446/1-746 NSKERWGYTS KWTNDYSMVL TGAAIYHKYY HYLYSHYLPA SLKNMVDQLA 651 700 bmy_14934T0/1-413 NCEDILMNFL VSAVTKLPPI KVTQKKQYKE TMMGQTSRAS RWADPDHFAQ BACU013197/1-420 NCEDILMNFL VSAVTKLPPI KVTQKKQYKE TMMGQTSRAS RWADPDHFAQ ENSBTAP00000008154/1-746 NCEDILMNFL VSAVTKLPPI KVTQKKQYKE TMMGQTSRAS RWADPDHFAQ ENSTTRP00000013744/1-746 NCEDILMNFL VSAVTKLPPI KVTQKKQYKE TMMGQTSRAS RWADPDHFAQ ENSP00000367446/1-746 NCEDILMNFL VSAVTKLPPI KVTQKKQYKE TMMGQTSRAS RWADPDHFAQ 701 750 bmy_14934T0/1-413 RQSCMNTFAS WFGYMPLIHS QMRLDPVLFK DQVSILRKKY RDIERL BACU013197/1-420 RQSCMNTFAS WFGYMPLIHS QMRLDPVLFK DQVSILRKKY RDIERL ENSBTAP00000008154/1-746 RQSCMNTFAS WFGYMPLIHS QMRLDPVLFK DQVSILRKKY RDIERL ENSTTRP00000013744/1-746 RQSCMNTFAS WFGYMPLIHS QMRLDPVLFK DQVSILRKKY RDIERL ENSP00000367446/1-746 RQSCMNTFAS WFGYMPLIHS QMRLDPVLFK DQVSILRKKY RDIERL