KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:34:29 2014 Check: 00 .. Name: ENSTTRP00000011629/1-771 Len: 838 Check: 3687 Weight: 1.00 Name: bmy_00925T0/1-397 Len: 838 Check: 5423 Weight: 1.00 Name: ENSBTAP00000008159/1-773 Len: 838 Check: 3751 Weight: 1.00 Name: ENSP00000373783/1-774 Len: 838 Check: 4184 Weight: 1.00 Name: BACU001974/1-814 Len: 838 Check: 7082 Weight: 1.00 // 1 50 ENSTTRP00000011629/1-771 MERPGGSCLC GCLSVLALLP ALSLAQYESW PHYPEYFQQP APEYHRPQVP bmy_00925T0/1-397 ---------- --------VP AVGRGR---- ---------- GTEYRRP--- ENSBTAP00000008159/1-773 MERRGSSCLC RCLALLALLP TLSLAQYESW RHYPEYFQEP APEYHRPEVP ENSP00000373783/1-774 MERPLCSHLC SCLAMLALLS PLSLAQYDSW PHYPEYFQQP APEYHQPQAP BACU001974/1-814 MGRHGGSRLC RCLSVLALLP ALSLAQYESW PHYPEYFQQP APEYHRPQVP 51 100 ENSTTRP00000011629/1-771 SDVVKIQLRL AGQKRKHSEG RVEVYYDGRW GTVCDDDFSI HAAHVVCREL bmy_00925T0/1-397 ---------- ---------- --------RW ---------- --ARCLRRTV ENSBTAP00000008159/1-773 SDVAKIQLRL AGQKRKHSEG RVEVYYDGQW GTVCDDDFTI HAAHVVCREL ENSP00000373783/1-774 ANVAKIQLRL AGQKRKHSEG RVEVYYDGQW GTVCDDDFSI HAAHVVCREL BACU001974/1-814 SDVVKIQLRL AGQKRKHSEG RVEVYYDGQW GTVCDDDFSI HAAHVVCREL 101 150 ENSTTRP00000011629/1-771 GYVEAKSWTP SSSYGKGEGP IWLDNVYCTG NEGTLAACSS NGWGVTDCKH bmy_00925T0/1-397 G--------- ---------- ---------- ---------- ---------- ENSBTAP00000008159/1-773 GYVEAKSWTA SSSYGKGEGP IWLDNVYCTG SEATLAACSS NGWGVTDCKH ENSP00000373783/1-774 GYVEAKSWTA SSSYGKGEGP IWLDNLHCTG NEATLAACTS NGWGVTDCKH BACU001974/1-814 GYVEAKSWTA SSSYGKGEGP IWLDNVYCTG NEGTLAACSS NGWGVTDCKH 151 200 ENSTTRP00000011629/1-771 TEDVGVVCSD KRIPGFKFDN SLINNIENMN IQVEDIRIRA ILSAYRRRTP bmy_00925T0/1-397 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000008159/1-773 TEDVGVVCSE KRIPGFKFDN SLINSIENMN IQVEDIRIRA ILSAFRKRTP ENSP00000373783/1-774 TEDVGVVCSD KRIPGFKFDN SLINQIENLN IQVEDIRIRA ILSTYRKRTP BACU001974/1-814 TED------- ---------- -------NMH IQVEDIRIRA ILSAYRKRTP 201 250 ENSTTRP00000011629/1-771 VTEGYVEVKE GKTWKQICDR HWTAKNSRVV CGMFGFPGEK SYNAKVYKMF bmy_00925T0/1-397 ---------- ----SQRC-- ---------- CGI------- ---------- ENSBTAP00000008159/1-773 VTEGYVEVKE GKTWKQICDK HWTAKNSRVV CGMFGFPGEK TYNTKVYKMF ENSP00000373783/1-774 VMEGYVEVKE GKTWKQICDK HWTAKNSRVV CGMFGFPGER TYNTKVYKMF BACU001974/1-814 VTEGYVEVKE GKTWKQICDR HWTAKNSRVV CGMFGFPGER SYNAKVYKMF 251 300 ENSTTRP00000011629/1-771 AARKKQRYWP FSMDCTGTEA HISSCRLGPQ VSLDPVKNVT CENGLPAVVS bmy_00925T0/1-397 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000008159/1-773 AARKKQRYWP YSMDCTGTEA HISSCKLGPQ VSLDPVKNVT CENGLPAVVS ENSP00000373783/1-774 ASRRKQRYWP FSMDCTGTEA HISSCKLGPQ VSLDPMKNVT CENGLPAVVS BACU001974/1-814 AARKKQRYWP FSMECTGTEA HISSCKLGPQ VSLDPVKNVT CENGLPAVVS 301 350 ENSTTRP00000011629/1-771 CVPGQVFSPD GPSRFRKAYK PEQPLVRLRG GANVGEGRVE VLKNGEWGTV bmy_00925T0/1-397 CVA------- ---------- ---------- ------GRTP CL--GEIGT- ENSBTAP00000008159/1-773 CVPGQVFSPD GPSRFRKAYK PEQPLVRLRG GANVGEGRVE VLKNGEWGTV ENSP00000373783/1-774 CVPGQVFSPD GPSRFRKAYK PEQPLVRLRG GAYIGEGRVE VLKNGEWGTV BACU001974/1-814 CVPGQVFSPD GPSRFRKAYK PEQPLVRLRG GANVGEGRVE VLKNGEWGTV 351 400 ENSTTRP00000011629/1-771 CDDKWDLVSA SVVCRELGFG SAKEAITGSR LGQGIGPIHL NEIECTGNEK bmy_00925T0/1-397 --------EG SMAGRQPAFP SWRSCLP--- ---------- ---------- ENSBTAP00000008159/1-773 CDDKWDLVSA SVVCRELGFG SAKEAITGSR LGQDIGPSPC RK-ECTGREK ENSP00000373783/1-774 CDDKWDLVSA SVVCRELGFG SAKEAVTGSR LGQGIGPIHL NEIQCTGNEK BACU001974/1-814 CDDKWDLVSA SVVCRELGFG SAKEAITGSR LGQGIGPIHL NEIECTGNEK 401 450 ENSTTRP00000011629/1-771 SIIDCKFNAE SHGCNHEEDA GVRCNIPAMG FQ-MLRLNGG RNPYEGRVEV bmy_00925T0/1-397 ---------- ---------- ---------- FSPQLRLNGG RNPYEGRVEV ENSBTAP00000008159/1-773 STFDVKSWAE SRRCSRREEA ELQCETPGTS FIPQLRLNGG RNPYEGRVEV ENSP00000373783/1-774 SIIDCKFNAE SQGCNHEEDA GVRCNTPAMG LQKKLRLNGG RNPYEGRVEV BACU001974/1-814 SIIDCKFNAE SQGCNHEEDA GVRCNIPAMG FQKRLRLNGG RNPYEGRVEV 451 500 ENSTTRP00000011629/1-771 LVERNGSLVW GTVCGENWGI VEAMVVCRQL GLGFASNAF- ---------- bmy_00925T0/1-397 LVERNGSLVW GTVCGENWGI VEAMVVCRQL GLGFASNAF- ---------- ENSBTAP00000008159/1-773 LVERNGSLVW GMVCGENWGI VEAMVVCRQL GLGFASNAF- ---------- ENSP00000373783/1-774 LVERNGSLVW GMVCGQNWGI VEAMVVCRQL GLGFASNAF- ---------- BACU001974/1-814 LVERNGSLVW GTVCGENWGI VEAMVVCRQL GLGFASNAFQ NQKMSEAPPS 501 550 ENSTTRP00000011629/1-771 ---------- -QXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_00925T0/1-397 ---------- ---------- ----QVVMSG VKCSGTELSL AHCHHDGEDL ENSBTAP00000008159/1-773 ---------- -QETWYWHGN INANKVVMSG VKCSGTELSL AHCRHDGEDV ENSP00000373783/1-774 ---------- -QETWYWHGD VNSNKVVMSG VKCSGTELSL AHCRHDGEDV BACU001974/1-814 CFANPDFSPC AQETWYWHGN INANKVVMSG VKCSGTELSL AHCRHDGEDL 551 600 ENSTTRP00000011629/1-771 XXXXXXXXXX XXXXXXXXAP DLVLNAEIVQ QSTYLEDRPM FMLQCAMEEN bmy_00925T0/1-397 ACPEGRVQHG AGVACSETAP DLVLNAEIVQ QSTYLEDRPM FMLQCAMEEN ENSBTAP00000008159/1-773 ACPEGGVRYG AGVACSETAP DLVLNAEIVQ QSTYLEDRPM FMLQCAMEEN ENSP00000373783/1-774 ACPQGGVQYG AGVACSETAP DLVLNAEMVQ QTTYLEDRPM FMLQCAMEEN BACU001974/1-814 ACPEGGVQHG AGVACSETAP DLVLNAEIVQ QSTYLEDRPM FMLQCAMEEN 601 650 ENSTTRP00000011629/1-771 CLAASAANTN PTTGYRRLLR FSSQIHNNGQ SDFRPKNGRH AWIWHDCHXX bmy_00925T0/1-397 CLAASAANTN PTTGYRRLLR FSSQIHNNGQ SDFRPKNGRH AWIWHDCHRH ENSBTAP00000008159/1-773 CLSASAAQTN PTTGYRRLLR FSSQIHNNGQ SDFRPKNGRH AWIWHDCHRH ENSP00000373783/1-774 CLSASAAQTD PTTGYRRLLR FSSQIHNNGQ SDFRPKNGRH AWIWHDCHRH BACU001974/1-814 CLAASAANTN PTTGYRRLLR FSSQIHNNGQ SDFRPKNGRH AWIWHDCHRH 651 700 ENSTTRP00000011629/1-771 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXIQ -SYECANF-E bmy_00925T0/1-397 YHSMEVFTHY DLLNLNGTKV AEGHKASFCL EDTECEGDIQ KSYECANFGE ENSBTAP00000008159/1-773 YHSMEVFTHY DLLNLNGTKV AEGHKASFCL EDTECEGDIQ KSYECANFGE ENSP00000373783/1-774 YHSMEVFTHY DLLNLNGTKV AEGHKASFCL EDTECEGDIQ KNYECANFGD BACU001974/1-814 YHSMEVFTHY DLQNLNGTKV AEGHKASFCL EDTECEGDIQ KSYECANFGE 701 750 ENSTTRP00000011629/1-771 QGITMGCWDM YRHDIXXXXX XXXXXXXXXX XXX------- ---------- bmy_00925T0/1-397 QGITMGCWDM YRHDIDCQWV DITDVPPGDY LFQ------- ---------- ENSBTAP00000008159/1-773 QGITMGCWDM YRHDIDCQWV DITDVPPGDY LFQ------- ---------- ENSP00000373783/1-774 QGITMGCWDM YRHDIDCQWV DITDVPPGDY LFQ------- ---------- BACU001974/1-814 QGITMGCWDM YRHDIDCQWV DITDVPPGDY LFQKPPQNDG LPAPDPLAYA 751 800 ENSTTRP00000011629/1-771 ---------- ---------- -----VVINP NYEVAESDYT NNIMKCRTRY bmy_00925T0/1-397 ---------- ---------- -----VVINP NYEVAESDYT NNVMKCRTRY ENSBTAP00000008159/1-773 ---------- ---------- -----VVINP NYEVAESDYT NNIMKCRTRY ENSP00000373783/1-774 ---------- ---------- -----VVINP NFEVAESDYS NNIMKCRSRY BACU001974/1-814 LLPGMMQRKG VQGGPSLPQS PGPALVVINP NYEVAESDYT NNVMKCRTRY 801 850 ENSTTRP00000011629/1-771 DGHRIWMYNC HIGGSFSEET EKKFEHFSGL INNQLSTR bmy_00925T0/1-397 DGHRIWMYNC HIGGSFSEET EKKFEHFSGL INNQLSTR ENSBTAP00000008159/1-773 DGHRIWMYNC HIGGSFSEET EKKFEHFSGL INNQVSKR ENSP00000373783/1-774 DGHRIWMYNC HIGGSFSEET EKKFEHFSGL LNNQLSPQ BACU001974/1-814 DGHRIWMYNC HIGGSFSEET EKKFEHFSGL INNQLSTR