KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:34:32 2014 Check: 00 .. Name: bmy_12914T0/1-349 Len: 392 Check: 2910 Weight: 1.00 Name: ENSP00000335522/1-376 Len: 392 Check: 13 Weight: 1.00 Name: ENSBTAP00000008180/1-370 Len: 392 Check: 4202 Weight: 1.00 Name: BACU000724/1-336 Len: 392 Check: 8138 Weight: 1.00 Name: ENSTTRP00000016167/1-377 Len: 392 Check: 2224 Weight: 1.00 // 1 50 bmy_12914T0/1-349 MGGGRSALRV CADHRGGINW LSLSPDGQRL LTGSEDGTAR LWSTADGQCC ENSP00000335522/1-376 MGGGGSALRV CADHRGGINW LSLSPDGQRL LTGSEDGTAR LWSTADGQCC ENSBTAP00000008180/1-370 MGGGGSALRV CADHRGGINW LSLSPDGQRL LTGSEDGTAR LWSTADGTCC BACU000724/1-336 MGGGGSALRV CADHRGGINW LSLSPDGQRL LTGSEDGTAR LWSTADGQCC ENSTTRP00000016167/1-377 MGGGGSALRV CADHRGGINW LSLSPDGQRL LTGSEDGTAR LWSTADGQCC 51 100 bmy_12914T0/1-349 ALLQGHESYV TFCQLEDEAA FTCSADCTIR KWDVLTGQCL QVFRGHTSIV ENSP00000335522/1-376 ALLQGHESYV TFCQLEDEAA FTCSADCTIR RWDVLTGQCL QVYRGHTSIV ENSBTAP00000008180/1-370 ALLQGHESYV TFCQLEDEAA FTCSADCTIR KWDVLTGQCL QVFRGHTSIV BACU000724/1-336 ALLQGHESYV TFCQLEDEAA FTCSADCTIR KWDVLTGQCL QVFRGHTSIV ENSTTRP00000016167/1-377 ALLQGHESYV TFCQLEDEAA FTCSADCTIR KWDVLTGQCL QVFRGHTSIV 101 150 bmy_12914T0/1-349 NRILVANNQL FSSSYDRTAR AWSVDKGQVA REFRGHRNCV LTLAYSAPQD ENSP00000335522/1-376 NRILVANNQL FSSSYDRTAR VWSVDKGQMS REFRGHRNCV LTLAYSAPWD ENSBTAP00000008180/1-370 NRILVADNQL FSSSYDRTAR AWSVDRGQVA REFRGHCNCV LTLAYA---- BACU000724/1-336 NRILVANNQL FSSSYDRTAR AWSVDKGQVA REFRGHRNCV LTLAYSAPQD ENSTTRP00000016167/1-377 NRILVANNQL FSSSYDRTAR AWSVDKGQVA REFRGHRNCV LTLAYSAPQD 151 200 bmy_12914T0/1-349 LPGAPCAEEA VARGLLVTGS TDGTAKVWQV ASGCCHQTLR GHTGAVLCLV ENSP00000335522/1-376 LPSTPCAEEA AAGGLLVTGS TDGTAKVWQV ASGCCHQTLR GHTGAVLCLV ENSBTAP00000008180/1-370 --GAPCMEEA VAGGLLVTGS TDATAKVWQV ASGCCHQTLR GHTGAVLCLV BACU000724/1-336 LPGAPCAEEA VARGLLVTGS TDGTAKVWQV ASGCCHQTLR GHTGAVLCLV ENSTTRP00000016167/1-377 LPGAPCTEEA VARGLLVTGS TDGTAKVWQV ASGCCHQTLR GHTGAVLCLV 201 250 bmy_12914T0/1-349 LATPGHTAFT GSTDATVRAW DILSGQQLRV FQEHQGPVIC LEAECEVSTG ENSP00000335522/1-376 LDTPGHTAFT GSTDATIRAW DILSGEQLRV FREHRGSVIC LEL---VNRL ENSBTAP00000008180/1-370 LDAPGHTAFT GSTDATVRAW DILSGQQLRV FREHQGSVIC LEL---VNRH BACU000724/1-336 LATPGHTAFT GSTDATVRAW DILSGQQLRV FQEHQGSVIC LEL---VNRH ENSTTRP00000016167/1-377 LATPGHTAFT GSTDATVRAW DILSGQQLRV FQEHQGSVIC LEL---VNRH 251 300 bmy_12914T0/1-349 ILGGLFHGAA V-FTPSLGNR VKHANPRGFQ KPGGGRAGVH RPPTEKVGQS ENSP00000335522/1-376 VYSGSADRTV KCWLADTGEC VRTFTAHR-- ---------R NVSALKYHAG ENSBTAP00000008180/1-370 L-AGSADRTV KCWLADTGER VRTFTAHR-- ---------H SVSALKYHAG BACU000724/1-336 VYSGSADRTV KCSLADTGER VRTFAAHR-- ---------H SVSALKYHAG ENSTTRP00000016167/1-377 VYSGSADRTV KCWLADTGER VRTFAAHR-- ---------H SVSALKYHAG 301 350 bmy_12914T0/1-349 RVFTGSGDAR ARAFDAQSGA LRRVFRGHAF IINCIQVGAP AL-------- ENSP00000335522/1-376 TLFTGSGDAC ARAFDAQSGE LRRVFRGHTF IINCIQVHGQ VLYTASHDGA ENSBTAP00000008180/1-370 TLFTGSGDAR ARAFDAQSGA LRRVFRGHAF VINCIQVHGQ VLYTASHDGA BACU000724/1-336 TLFTGSGDAR ARAFDAQSGA LRRVFRGHAF IINCIQVGAP AL-------- ENSTTRP00000016167/1-377 TLFTGSGDAR ARAFDAQSGA LRRVFRGHAF IINCIQVHGQ VLYTASHDGA 351 400 bmy_12914T0/1-349 ---------- ---------- ---------- ----SGAPWL VG ENSP00000335522/1-376 LRLWDVRGLR GAPRPPPPMR SLSRLFSNKV GC--AAAPLQ PA ENSBTAP00000008180/1-370 LRLWDVRGLP -PPRAAAPKR SLSRLFSNKV GCAAAAAPLQ PA BACU000724/1-336 ---------- ---------- ---------- ----SGAPWL VG ENSTTRP00000016167/1-377 LRLWDVRGLP RDPPPPPPKR SLSRLFSNKV GC-AAAAPLQ PA