KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:34:33 2014 Check: 00 .. Name: ENSP00000357669/1-1061 Len: 1081 Check: 1235 Weight: 1.00 Name: bmy_09682T0/1-1027 Len: 1081 Check: 9452 Weight: 1.00 Name: ENSBTAP00000008184/1-1064 Len: 1081 Check: 7303 Weight: 1.00 Name: BACU007490/1-1068 Len: 1081 Check: 7582 Weight: 1.00 Name: ENSTTRP00000014002/1-1055 Len: 1081 Check: 258 Weight: 1.00 // 1 50 ENSP00000357669/1-1061 ------MPGP RRPAGSRLRL LLLLLLPPLL LLLRGSHAGN LTVAVVLPLA bmy_09682T0/1-1027 ------MPRP GCPSGARLRL LLLL---PPL LLLPGGYAGD LTVAVVLPLA ENSBTAP00000008184/1-1064 MVPAEAMPRP GRPSGARLRL LLLL---PPL LLLPGSYAGN LTVAVVLPLT BACU007490/1-1068 ------MPRP GCPSGARLRL LLLL---PPL LLLPGGYAGD LTVAVVLPLA ENSTTRP00000014002/1-1055 ------MPRP GCPSGARLRL LLLL---PPL LLLPGSYAGN LTVAVVL-LA 51 100 ENSP00000357669/1-1061 NTSYPWSWAR VGPAVELALA QVKARPDLLP GWTVRTVLGS SENALGVCSD bmy_09682T0/1-1027 NTSYPWSWAR VGPAVELALA RVKARPDLLP GWTVRTVLGS SESALGVCSD ENSBTAP00000008184/1-1064 NTSYPWSWAR VGPAVELALA RVKARPDLLP GWTVRTVLGS SESALGVCSD BACU007490/1-1068 NTSYPWSWAR VGPAVELALA RVKARPDLLP GWTVRTVLGS SESALGVCSD ENSTTRP00000014002/1-1055 NTSYPWSWAR VGPAVELTLA QVKARPDLLP S-TVRTVLSS SESALSVCSD 101 150 ENSP00000357669/1-1061 TAAPLAAVDL KWEHNPAVFL GPGCVYAAAP VGRFTAHWRV PLLTAGAPAL bmy_09682T0/1-1027 TAAPLAAVDL KWEHNPAVFL GPGCVYAAAP VGRFTAHWRV PLLTAGAPAV ENSBTAP00000008184/1-1064 TAAPLAAVDL KWEHSPAVFL GPGCVYAAAP VGRFTAHWRV PLLTAGAPAV BACU007490/1-1068 TAAPLAAVDL KWEHNPAVFL GPGCVYAAAP VGRFTAHWRV PLLTAGAPAV ENSTTRP00000014002/1-1055 TAAPLAAVDL K-EHNPAVFL SPGCVYAAAP VGRFTAHWRV PLLTAGAPAV 151 200 ENSP00000357669/1-1061 GFGVKDEYAL TTRAGPSYAK LGDFVAALHR RLGWERQALM LYAYRPGDEE bmy_09682T0/1-1027 GFGAKDEYAL TTRAGPSHAK LGDFVAALHR RLGWERQALV LYAYQPRDDQ ENSBTAP00000008184/1-1064 GFGAKDEYAL TTRAGPSHAK LGDFVAALHR RLGWERQALV LYAYQPGDDQ BACU007490/1-1068 GFGAKDEYAL TTRAGPSHAK LGDFVAALHR RLGWERQALV LYAYQPRDDQ ENSTTRP00000014002/1-1055 GFGAKDEYAL TTRAGPSHAK LGDFVAALHR RLGWERQALV LYAYQPRDDQ 201 250 ENSP00000357669/1-1061 HCFFLVEGLF MRVRDRLNIT VDHLEFAEDD LSHYTRLLRT MPRKGRVIYI bmy_09682T0/1-1027 PCFFVVEGLY MQVRDRLNIT VDHLEFAEGD RDHYTMLLRT VRRKGRVVYI ENSBTAP00000008184/1-1064 PCFFVVEGLY MRVRDRLNIT VDHLEFAEGD RDHYTMLLRT VRRKGRVIYI BACU007490/1-1068 PCFFVVEGLY MQVRDRLNIT VDHLEFAEGD RDHYTMLLRT VRRKGRVVYI ENSTTRP00000014002/1-1055 PCFFVVEGLY MQVRDRLNIT VDHLEFAEGD RDHYTMLLRT VRRKGRVVYI 251 300 ENSP00000357669/1-1061 CSSPDAFRTL MLLALEAGLC GEDYVFFHLD IFGQSLQGGQ GPAPRRPWER bmy_09682T0/1-1027 CSSPDTFRTL MLLALEAGLS GEDYVFFHLD LFGQSLQGAH GLAPHRPWER ENSBTAP00000008184/1-1064 CSSPDTFRAL MLLALEAGLS GNDYVFFHLD LFGQSLQGAH GIAPRRPWER BACU007490/1-1068 CSSPDTFRTL MLLALEAGLS GENYVFFHLD LFGQSLQGAH GLAPHRPWER ENSTTRP00000014002/1-1055 CSSPDTFRTL MLLALEAGLS GEDYVFFHLD LFGQSLQGAH GLAPHRPWER 301 350 ENSP00000357669/1-1061 GDGQDVSARQ AFQAAKIITY KDPDNPEYLE FLKQLKHLAY EQFNFTMEDG bmy_09682T0/1-1027 GDGQDVSAHQ AFQAAKIITY KEPDNPEYLE FLQKLKHLAH EQFNFTMEDG ENSBTAP00000008184/1-1064 GDGQDVSAHQ AFRAAKIITY KEPDNPEYLE FLQKLKRLAL EQFNFTMEDG BACU007490/1-1068 GDGQDVSAHQ AFQAAKIITY KEPDNPEYLE FLQKLKHLAH EQFNFTMEDG ENSTTRP00000014002/1-1055 GDGQDVSAHQ AFQAAKIITY KEPDNPEYLE FLQKLKHLAH EQFNFTMEDG 351 400 ENSP00000357669/1-1061 LVNTIPASFH DGLLLYIQAV TETLAHGGTV TDGENITQRM WNRSFQGVTG bmy_09682T0/1-1027 LVNTIPASFH DGLLLYVQAV SETLAHGGTV TDGEGITQRM WNRSFQGVTG ENSBTAP00000008184/1-1064 LVNTIPASFH DGLLLYIQAV TETLAHGGAV TDGEGITQRM WNRSFQGVTG BACU007490/1-1068 LVNTIPASFH DGLLLYVQAV SETLAHGGTV TDGEGITQRM WNRSFQGVTG ENSTTRP00000014002/1-1055 LVNTIPASFH DGLLLYVQAV SETLAHGGTV TDGEGITQRM WNRSFQGVTG 401 450 ENSP00000357669/1-1061 YLKIDSSGDR ETDFSLWDMD PENGAFRVVL NYNGTSQELV AVSGRKLNWP bmy_09682T0/1-1027 YLKMDSNGDR ETDFSLWDMD PDTGAFRVVL NFNGTSQELV TVSGCKLNWP ENSBTAP00000008184/1-1064 YLKMDSNGDR ETDFSLWDMD PNTGAFRVVL NFNGTSQELM TMSGCKLNWP BACU007490/1-1068 YLKMDSNGDR ETDFSLWDMD PDTGAFRVVL NFNGTSQELV TVSGCKLNWP ENSTTRP00000014002/1-1055 YLKMDSNGDR ETDFSLWDMD PDTGAFRVVL NFNGTSQELV TVSGRKLNWP 451 500 ENSP00000357669/1-1061 LGYPPPDIPK CGFDNEDPAC NQDHLSTLEV LALVGSLSLL GILIVSFFIY bmy_09682T0/1-1027 LGYPPPDVPK CGFDNEDPAC NQGD-CPLPS KPPLWRCCIL PAQGVKYVLL ENSBTAP00000008184/1-1064 LGYPPPDVPK CGFDNEDPAC NQDHFSTLEV LALVGSLSLL SILIVSFFIY BACU007490/1-1068 LGYPPPDVPK CGFDNEDPAC NQDHFSTLEV LALVGSLSLL SILIVSFFIY ENSTTRP00000014002/1-1055 LGYPPPDVPK CGFDNEDPAC NQDHFSTLEV LALVGSLSLL SILLISFFIY 501 550 ENSP00000357669/1-1061 R----KMQLE KELASELWRV RWEDVEPSSL ERHLRSAGSR LTLSGRGSNY bmy_09682T0/1-1027 SHTEGKMQLE KELASELWRV RWEDLQPSSL ERHLRSAGSR LTLSGRGSNY ENSBTAP00000008184/1-1064 R----KMQLE KELASELWRV RWEDLQPSSL ERHLRSAGSR LTLSGRGSNY BACU007490/1-1068 R----KMQLE KELASELWRV RWEDLQPSSL ERHLRSAGSR LTLSGRGSNY ENSTTRP00000014002/1-1055 R----KMQLE KELASELWRV RWEDLQPSSL ERHLRSAGSR LTLSGRGSNY 551 600 ENSP00000357669/1-1061 GSLLTTEGQF QVFAKTAYYK GNLVAVKRVN RKRIELTRKV LFELKHMRDV bmy_09682T0/1-1027 GSLLTTEGQF QIFAKTAYYK GNLVAVKRVN RKRIELTREV LFELKH---- ENSBTAP00000008184/1-1064 GSLLTTEGQL QIFAKTAYYK GNLVAVKRVN RKRIELTREV LFELKHMRDV BACU007490/1-1068 GSLLTTEGQF QIFAKTAYYK GNLVAVKRVN RKRIELTREV LFELKHMRDV ENSTTRP00000014002/1-1055 GSLLTTEGQF QIFAKTAYYK GNLVAVKRVN RKRIELTREV LFELKHMRDV 601 650 ENSP00000357669/1-1061 QNEHLTRFVG ACTDPPNICI LTEYCPRGSL ---------- QDILENESIT bmy_09682T0/1-1027 ---------- ---------- ---------- ---------- QDILENESIT ENSBTAP00000008184/1-1064 QNEHLTRFVG ACTDPPNICI LTEYCPRGSL ---------- QDILENESIT BACU007490/1-1068 QNEHLTRFVG ACTDPPNICI LTEYCPRGSL QGTGLTLTAQ QDILENESIT ENSTTRP00000014002/1-1055 QNEHLTRFVG ACTDPPNICI LTEYCPRGSL ---------- QDILENESIT 651 700 ENSP00000357669/1-1061 LDWMFRYSLT NDIVKGMLFL HNGAICSHGN LKSSNCVVDG RFVLKITDYG bmy_09682T0/1-1027 LDWMFRYSLT HDIVKGMLFL HNGAICSHGN LKSSNCVVDG RFVLKITDYG ENSBTAP00000008184/1-1064 LDWMFRYSLT NDIVKGMLFL HNGAICSHGN LKSSNCVVDG RFVLKITDYG BACU007490/1-1068 LDWMFRYSLT HDIVKGMLFL HNGAICSHGN LKSSNCVVDG RFVLKITDYG ENSTTRP00000014002/1-1055 LDWMFRYSLT HDIVKGMLFL HNGAICSHGN LKSSNCVVDG RFVLKITDYG 701 750 ENSP00000357669/1-1061 LESFRDLDPE QGHTVYAKKL WTAPELLRMA SPPVRGSQAG DVYSFGIILQ bmy_09682T0/1-1027 LESFRDPEPE QGYTLYAKKL WTAPELLRMA SPPARGSQAG DVYSFGIILQ ENSBTAP00000008184/1-1064 LESFRDPEPE QGHTLYAKKL WTAPELLRMA SPPARGSQAG DVYSFGIILQ BACU007490/1-1068 LESFRDPEPE QGYTLYAKKL WTAPELLRMA SPPARGSQAG DVYSFGIILQ ENSTTRP00000014002/1-1055 LESFRDPEPE QGHTLYAKKL WTAPELLRMA SPPARGSQAG DVYSFGIILQ 751 800 ENSP00000357669/1-1061 EIALRSGVFH VEGLDLSPKE IIERVTRGEQ PPFRPSLALQ SHLEELGLLM bmy_09682T0/1-1027 EIALRSGVFH VEGLDLSPKE IIERVTRGEQ PPFRPSLALQ SHLEELGQLM ENSBTAP00000008184/1-1064 EIALRSGAFH VEGLDLSPKE IIERVTRGEQ PPFRPSLALQ SHLEELGQLM BACU007490/1-1068 EIALRSGVFH VEGLDLSPKE IIERVTRGEQ PPFRPSLALQ SHLEELGQLM ENSTTRP00000014002/1-1055 EIALRSGVFH VEGLDLSPKE IIERVTRGEQ PPFRPSLALQ SHLEELGQLM 801 850 ENSP00000357669/1-1061 QRCWAEDPQE RPPFQQIRLT LRKFNRENSS NILDNLLSRM EQYANNLEEL bmy_09682T0/1-1027 QRCWAEDPQE RPPFQQIRLM LRKFNRENSS NILDNLLSRM EQYANNLEEL ENSBTAP00000008184/1-1064 QRCWAEDPQE RPPFQQIRLM LRKFNRENSS NILDNLLSRM EQYANNLEEL BACU007490/1-1068 QRCWAEDPQE RPPFQQIRLM LRKFNRENSS NILDNLLSRM EQYANNLEEL ENSTTRP00000014002/1-1055 QRCWAEDPQE RPPFQQIRLM LRKFNRENSS NILDNLLSRM EQYANNLEEL 851 900 ENSP00000357669/1-1061 VEERTQAYLE EKRKAEALLY QILPHSVAEQ LKRGETVQAE AFDSVTIYFS bmy_09682T0/1-1027 VEERTQAYLE EKRKAEALLY QILPHSVAEQ LKRGETVQAE AFDSVTIYFS ENSBTAP00000008184/1-1064 VEERTQAYLE EKRKAEALLY QILPHSVAEQ LKRGETVQAE AFDSVTIYFS BACU007490/1-1068 VEERTQAYLE EKRKAEALLY QILPHSVAEQ LKRGETVQAE AFDSVTIYFS ENSTTRP00000014002/1-1055 VEERTQAYLE EKRKAEALLY QILPHSVAEQ LKRGETVQAE AFDSVTIYFS 901 950 ENSP00000357669/1-1061 DIVGFTALSA ESTPMQVVTL LNDLYTCFDA VIDNFDVYKV ETIGDAYMVV bmy_09682T0/1-1027 DIVGFTALSA ESTPMQVVTL LNDLYTCFDA VIDNFDVYKV ETIGDAYMVV ENSBTAP00000008184/1-1064 DIVGFTALSA ESTPMQVVTL LNDLYTCFDA VIDNFDVYKV ETIGDAYMVV BACU007490/1-1068 DIVGFTALSA ESTPMQVVTL LNDLYTCFDA VIDNFDVYKV ETIGDAYMVV ENSTTRP00000014002/1-1055 DIVGFTALSA ESTPMQVVTL LNDLYTCFDA VIDNFDVYKV ETIGDAYMVV 951 1000 ENSP00000357669/1-1061 SGLPVRNGRL HACEVARMAL ALLDAVRSFR IRHRPQEQLR LRIGIHTGPV bmy_09682T0/1-1027 SGLPVRNGRL HAREVARMAL ALLDAVRSFR IRHRPQEQLR LRIGIHTGPV ENSBTAP00000008184/1-1064 SGLPVRNGRL HAREVARMAL ALLDAVRSFR IRHRPQEQLR LRIGIHTGPV BACU007490/1-1068 SGLPVRNGRL HAREVARMAL ALLDAVRSFR IRHRPQEQLR LRIGIHTGPV ENSTTRP00000014002/1-1055 SGLPVRNGRL HAREVARMAL ALLDAVRSFR IRHRPQEQLR LRIGIHTGPV 1001 1050 ENSP00000357669/1-1061 CAGVVGLKMP RYCLFGDTVN TASRMESNGE ALKIHLSSET KAVLEEFGGF bmy_09682T0/1-1027 CAGVVGLKMP RYCLFGDTVN TASRMESNGE ALKIHLSSET TAVLEEFGGF ENSBTAP00000008184/1-1064 CAGVVGLKMP RYCLFGDTVN TASRMESNGE ALKIHLSSET KAVLEEFGGF BACU007490/1-1068 CAGVVGLKMP RYCLFGDTVN TASRMESNGE ALKIHLSSET KAVLEEFGGF ENSTTRP00000014002/1-1055 CAGVVGLKMP RYCLFGDTVN TASRMESNGE ALKIHLSSET KAVLEEFGGF 1051 1100 ENSP00000357669/1-1061 ELELRGDVEM KGKGKVRTYW LLGERGSSTR G bmy_09682T0/1-1027 ELELRGDVEM KGKGKVRTYW LLGERGSSTR G ENSBTAP00000008184/1-1064 ELELRGDVEM KGKGKVRTYW LLGERGSSTR G BACU007490/1-1068 ELELRGDVEM KGKGKVRTYW LLGERGSSTR G ENSTTRP00000014002/1-1055 ELELRGDVEM KGKGKVRTYW LLGERASSTR G