KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:34:38 2014 Check: 00 .. Name: ENSTTRP00000016019/1-604 Len: 1205 Check: 9929 Weight: 1.00 Name: ENSP00000264645/1-703 Len: 1205 Check: 4152 Weight: 1.00 Name: BACU007030/1-1139 Len: 1205 Check: 117 Weight: 1.00 Name: bmy_13556T0/1-605 Len: 1205 Check: 1809 Weight: 1.00 Name: ENSBTAP00000008203/1-703 Len: 1205 Check: 2094 Weight: 1.00 // 1 50 ENSTTRP00000016019/1-604 ---------- ---------- ---------- ---------- ---------- ENSP00000264645/1-703 ---------- ---------- -MADRRRQRA SQDTEDEESG AS-------- BACU007030/1-1139 MTMRSAVFKA AAAPAGGNPE QRLDYERAAA LGGPEDEPGA AEAHFLPRHR bmy_13556T0/1-605 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000008203/1-703 ---------- ---------- -MADRRRQRA SQDTEDEESG AS-------- 51 100 ENSTTRP00000016019/1-604 ---------- ---------- ---------- ---------- ---------- ENSP00000264645/1-703 ---------G SDSGGSPLRG GGSCSGS--- ---------- ---------- BACU007030/1-1139 KLKEPGPPLA SSQGGSPAPS PAGCGGKGRG LLLPAGAAPG QQEESWGGSV bmy_13556T0/1-605 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000008203/1-703 ---------G SDSGGSPARG GGSCSGS--- ---------- ---------- 101 150 ENSTTRP00000016019/1-604 ---------- ---------- ---------- ---------- ---------- ENSP00000264645/1-703 ---------- ---------- ---------- ---------- ---------- BACU007030/1-1139 PLPCPPPATK QAGIGGEPAA AGAGCSPRPK YQAVLPIQTG SLVAAAKEPT bmy_13556T0/1-605 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000008203/1-703 ---------- ---------- ---------- ---------- ---------- 151 200 ENSTTRP00000016019/1-604 ---------- ---------- ---------- ---------- ---------- ENSP00000264645/1-703 ---------- ---------- ---------- ---------- ---------- BACU007030/1-1139 PWAGDKGGAA PPGATASDPA GPPPLPLPGP PPLAPTAAAG TLAASEGRWK bmy_13556T0/1-605 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000008203/1-703 ---------- ---------- ---------- ---------- ---------- 201 250 ENSTTRP00000016019/1-604 ---------- ---------- ---------- ---------- ---------- ENSP00000264645/1-703 -------AGG GGSGS----- ---------- ---------- ---------L BACU007030/1-1139 STRKSPLGGG GGSGASSQAA CLKQILLLQL DLIEQQQQQL QAKEKEIEEL bmy_13556T0/1-605 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000008203/1-703 -------VGG GGSGS----- ---------- ---------- ---------L 251 300 ENSTTRP00000016019/1-604 ---------- ---------- ---------- ---------- ---------- ENSP00000264645/1-703 PSQRG----- ---------- ---------- ---------- ---------- BACU007030/1-1139 KSERDTLLAR IERMERRMQL VKKDNEKERH KLFQGYETEE REETELSEKI bmy_13556T0/1-605 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000008203/1-703 PSQRG----- ---------- ---------- ---------- ---------- 301 350 ENSTTRP00000016019/1-604 ---------- ---------- ---------- ---------- ---------- ENSP00000264645/1-703 ---------- ---------- --GRTGALHL RRVESGGAK- ---------- BACU007030/1-1139 KLECQPELSE TSQTLPPKPF SCGRSGKGHK RKSPFGSTER KIPVKKLAPE bmy_13556T0/1-605 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000008203/1-703 ---------- ---------- --GRAGALHL RRVESGGAK- ---------- 351 400 ENSTTRP00000016019/1-604 ---------- ---------- ---------- ---------- ---------- ENSP00000264645/1-703 ---------- ---------- ---------- ---------- ---------- BACU007030/1-1139 FSKVKTKTPK HSPVKEEPCG SLSETVCKRE LRSQETPEKP RSSVDTPPRL bmy_13556T0/1-605 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000008203/1-703 ---------- ---------- ---------- ---------- ---------- 401 450 ENSTTRP00000016019/1-604 ---------- ---------- ---------- ---------- ---------- ENSP00000264645/1-703 ---------- ---------- ---------- ---------- ---------- BACU007030/1-1139 STPQKGPSTH PKEKAFSSEI EDLPYLSTTE MYLCRWHQPP PSPLPLRESS bmy_13556T0/1-605 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000008203/1-703 ---------- ---------- ---------- ---------- ---------- 451 500 ENSTTRP00000016019/1-604 ---------- ---------- ---------- ---------- ---------- ENSP00000264645/1-703 ---------- ---------- ---------- ---------- ---------- BACU007030/1-1139 PKKEETVAIP SWRDHSVEPL RDPNPSDLLE NLDDSVFSKR HAKLELDEKR bmy_13556T0/1-605 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000008203/1-703 ---------- ---------- ---------- ---------- ---------- 501 550 ENSTTRP00000016019/1-604 ---------- ---------- ---------- ---------- ---------- ENSP00000264645/1-703 ---------- ---------- ---------- ---------- ---------- BACU007030/1-1139 RKRWDIQRIR EQRILQRLQL RMYKKKGIQE SEPEVTSFFP EPDDVESLMI bmy_13556T0/1-605 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000008203/1-703 ---------- ---------- ---------- ---------- ---------- 551 600 ENSTTRP00000016019/1-604 ---------- ---------- ---------- ---------- ---------- ENSP00000264645/1-703 ---------- ---------- --SAEESECE SEDGIEGDAV LSDYESAEDS BACU007030/1-1139 TPFLPVVAFG RPLPKLTPQI KSSEKRMRME SEDGIEGDAV LSDYESAEDS bmy_13556T0/1-605 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000008203/1-703 ---------- ---------- --SAEESECE SEDGIEGDAV LSDYESAEDS 601 650 ENSTTRP00000016019/1-604 -GDEGEYSEE ENSKVELKSE ANDAANSSAK DEKGEEKPDT KGTVTGERQS ENSP00000264645/1-703 EGEEGEYSEE ENSKVELKSE ANDAVNSSTK EEKGEEKPDT KSTVTGERQS BACU007030/1-1139 EGDEGEYSEE ENSKVELKSE ANDAANSSAK DEKGEEKPDT KGTVTGERQS bmy_13556T0/1-605 QGDEGEYSEE ENSKVELKSE ANDAANSSAK DEKGEEKPDT KGTVTGERQS ENSBTAP00000008203/1-703 EGDDGEYSEE ENSKVELKSE ANDAANSSAK DEKGEEKPDT KGTVTGERQS 651 700 ENSTTRP00000016019/1-604 GDGQESTEPV ENKVGKNGPK HLDDDEDRKN PAYIPRKGLF FEHDLRGQTQ ENSP00000264645/1-703 GDGQESTEPV ENKVGKKGPK HLDDDEDRKN PAYIPRKGLF FEHDLRGQTQ BACU007030/1-1139 GDGQESTEPV ENKVESANLR HFS------- ---------- ---------- bmy_13556T0/1-605 GDGQESTEPV ENKVGKKGPK XLDDDEDRKN PAYIPRKGLF FEHDLRGQTQ ENSBTAP00000008203/1-703 GDGQESTEPV ENKVGKKGPK HLDDDEDRKN PAYIPRKGLF FEHDLRGQTQ 701 750 ENSTTRP00000016019/1-604 EEEVXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000264645/1-703 EEEVRPKGRQ RKLWKDEGRW EHDKFREDEQ APKSRQELIA LYGYDIRSAH BACU007030/1-1139 LVSTRPKGRQ RKLWKDEGRW EHDKFREDEQ APKSRQELIA LYGYDIRSAH bmy_13556T0/1-605 EEEVRPKGRQ RKLWKDEGRW EHDRFREDEQ APKSRQELIA LYGYDIRSAH ENSBTAP00000008203/1-703 EEEVRPKGRQ RKLWKDEGRW EHDKFREDEQ APKSRQELIA LYGYDIRSAH 751 800 ENSTTRP00000016019/1-604 XXXXXXXXXX XXXXFGSPPQ RDPNWIGERP NKSHRHQGPG GTLPPRTFIN ENSP00000264645/1-703 NPDDIKPRRI RKPRYGSPPQ RDPNWNGERL NKSHRHQGLG GTLPPRTFIN BACU007030/1-1139 NPDDIKPRRI RKPRFGSPPQ RDPNWIGERP NKSHRHQGPG GTLPPRTFIN bmy_13556T0/1-605 NPDDIKPRRI RKPRFGSPPQ RDPNWIGERP NKSHRHQGPG GTLPPRTFIN ENSBTAP00000008203/1-703 NPDDIKPRRI RKPRFGSPPQ RDPSWIGERP NKSHRHQGPG GTLPPRTFIN 801 850 ENSTTRP00000016019/1-604 RNAVGTGRMS AARNYSRSGG FKEGCAGFRP MEAGGQHAGR SGETVKHETS ENSP00000264645/1-703 RNAAGTGRMS APRNYSRSGG FKEGRAGFRP VEAGGQHGGR SGETVKHEIS BACU007030/1-1139 RNAAGTGRMS AARNYPRSGG FKEGCAGFRP VEAGGQHAGR SGETVKHETS bmy_13556T0/1-605 RNAAGTGRMS AARNYSRSGG FKEGCAGFRP VEAGGQHAGR SGETVKHETS ENSBTAP00000008203/1-703 RNAAGTGRMS APRNYSRSGG FKEGRTGFRP AEAGGQHAGR SGETVKHETS 851 900 ENSTTRP00000016019/1-604 YRSRRLEQTP VRDPSPEADA QVLGSPEKEE AAPEIPNPAP DTAPPAPDRP ENSP00000264645/1-703 YRSRRLEQTS VRDPSPEADA PVLGSPEKEE AASEPPAAAP DAAPPPPDRP BACU007030/1-1139 YRSRRLEQTP VRDPSPEADA QVLGSPEKEE AASEIPNPAP DTAPPAPDRP bmy_13556T0/1-605 YRSRRLEQTP VRDPSPEADA QVLGSPEKEE AASEIPNPAP DTAPPAPDRP ENSBTAP00000008203/1-703 YRSRHLEQTP VRDPSPEADA QVLGSPEKEE VAPEIPNPAP DTAPPVPDRP 901 950 ENSTTRP00000016019/1-604 IEKKSYSRAR RTRVKAGDAV KVAEEVPPPP EGLTPAPPVP ETTPPPPAKT ENSP00000264645/1-703 IEKKSYSRAR RTRTKVGDAV KLAEEVPPPP EGLIPAPPVP ETTPTPPTKT BACU007030/1-1139 IEKKSYSRAR RTRVKAGDAV KVAEEVPPPP EGLTPAPPVP ETTPPPPAKT bmy_13556T0/1-605 IEKKSYSRAR RTRVKAGDAV KVAEEVPPPP EGLTPAPPVP ETTPPPPAKT ENSBTAP00000008203/1-703 VEKKSYSRAR RTRIKAGDAG KVAEEVPPPP EGLTPAPPVP EATPPTPAKT 951 1000 ENSTTRP00000016019/1-604 GNWEAPVDST TGGLEQDVAQ LNITEQNWSP GQPSFLQSRE LRSMPNHIHM ENSP00000264645/1-703 GTWEAPVDSS TSGLEQDVAQ LNIAEQNWSP GQPSFLQPRE LRGMPNHIHM BACU007030/1-1139 GNWEAPVDST TGGLEQDVAQ LNITEQNWSP GQPSFLQSRE LRGMPNHIHM bmy_13556T0/1-605 GNWEAPVDST TGGLEQDVAQ LNITEQNWSP GQPSFLQSRE LRGMPNHIHM ENSBTAP00000008203/1-703 GNWEAPVDST TGGLEQDVAQ LNITEQNWSP GQPAFLQSRE LRGMPNHIHM 1001 1050 ENSTTRP00000016019/1-604 GAGPPPQFNR MEEMGVQGGR AKRYSSQRQR PVPEPPAPPV HISIMEGHYY ENSP00000264645/1-703 GAGPPPQFNR MEEMGVQGGR AKRYSSQRQR PVPEPPAPPV HISIMEGHYY BACU007030/1-1139 GAGPPPQFNR MEEMGVQGGR AKRYSSQRQR PVPEPPAPPV HISIMEGHYY bmy_13556T0/1-605 GAGPPPQFNR MEEMGVQGGR AKRYSSQRQR PVPEPPAPPV HISIMEGHYY ENSBTAP00000008203/1-703 GAGPPPQFNR MEEMGVQGGR AKRYSSQRQR PVPEPPAPPV HISIMEGHYY 1051 1100 ENSTTRP00000016019/1-604 DPLQFQGPIY THGDSPAPLP PQGMIVQPEM HLPHPGLHPH QTPAPLPNPG ENSP00000264645/1-703 DPLQFQGPIY THGDSPAPLP PQGMLVQPGM NLPHPGLHPH QTPAPLPNPG BACU007030/1-1139 D--------- ---------- ---------- ----PCLHPH QTPAPLPNPG bmy_13556T0/1-605 DPLQFQGPIY THGDSPAPLP PQGMIVQPEM HLPHPGLHPH QTPAPLPNPG ENSBTAP00000008203/1-703 DPLQFQGPIY THGDSPAPLP PQGMIVQPEM HLPHPGLHPH QTPAPLPNPG 1101 1150 ENSTTRP00000016019/1-604 LYPPPVSMAP GQPPPQQLLA PTYFSAPGVM NFGNPSYPYA PGALPPPPPP ENSP00000264645/1-703 LYPPPVSMSP GQPPPQQLLA PTYFSAPGVM NFGNPSYPYA PGALPPPPPP BACU007030/1-1139 LYPPPVSMSP GQPPPQQLLA PTYFSAPGVM NFGNPSYPYA PGALPPPPPP bmy_13556T0/1-605 LYPPPVSMSP GQPPPQQLLA PTYFSAPGVM NFGNPSYPYA PGALPPPPPP ENSBTAP00000008203/1-703 LYPPPVSMSP GQPPPQQLLA PTYFSAPGVM NFGNPSYPYA PGALPPPPPP 1151 1200 ENSTTRP00000016019/1-604 HLYPNTQAPS QVYGGVTYYN PAQQQVQPKP SPPRRTPQPV TIKPPPPEVV ENSP00000264645/1-703 HLYPNTQAPS QVYGGVTYYN PAQQQVQPKP SPPRRTPQPV TIKPPPPEVV BACU007030/1-1139 HLYPNTQAPS QVYGGVTYYN PAQQQVQPKP SPPRRTPQPV TIKPPPPEV- bmy_13556T0/1-605 HLYPNTQAPS QVYGGVTYYN PAQQQVQPKP SPPRRTPQPV TIKPPPPEVV ENSBTAP00000008203/1-703 HLYPNTQAPS QVYGGVTYYN PAQQQVQPKP SPPRRTPQPV TIKPPPPEVV 1201 1250 ENSTTRP00000016019/1-604 SRGSS ENSP00000264645/1-703 SRGSS BACU007030/1-1139 ----- bmy_13556T0/1-605 SRGSS ENSBTAP00000008203/1-703 SRGSS