KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:34:45 2014 Check: 00 .. Name: ENSBTAP00000008209/1-491 Len: 491 Check: 7510 Weight: 1.00 Name: BACU001102/1-439 Len: 491 Check: 7471 Weight: 1.00 Name: ENSP00000356150/1-490 Len: 491 Check: 3309 Weight: 1.00 Name: bmy_02397T0/1-404 Len: 491 Check: 1033 Weight: 1.00 Name: ENSTTRP00000011544/1-491 Len: 491 Check: 7325 Weight: 1.00 // 1 50 ENSBTAP00000008209/1-491 MTSFSTSAPC SASDSARRIS PEQTNQVRPK LPLLKILQAA GAQGEMFTVK BACU001102/1-439 MTTFSTSAHC STSDSACRIS PEQTNQVRPK LPLLKILQAA GAQGEMFTVK ENSP00000356150/1-490 MTSFSTSAQC STSDSACRIS PGQINQVRPK LPLLKILHAA GAQGEMFTVK bmy_02397T0/1-404 MTTFSTSAHC STSDSACRIS PEQTNQVRPK LPLLKILQAA GAQGEMFTVK ENSTTRP00000011544/1-491 MTTFSTSAHC STSDSACRIS PEQTNQVRPK LPLLKILQAA GAQGEMFTVK 51 100 ENSBTAP00000008209/1-491 EVMHYLGQYI MVKQLYDQQE QHMVYCGGDL LGELLGRQSF SVKDPSPLYD BACU001102/1-439 EVMHYLGQYI MVKQLYDQQE QHMVYCGGDL LGELLGRQSF SVKDPR---- ENSP00000356150/1-490 EVMHYLGQYI MVKQLYDQQE QHMVYCGGDL LGELLGRQSF SVKDPSPLYD bmy_02397T0/1-404 EVMHYLGQYI MVKQLYDQQE QHMVYCGGDL LGELLGRQSF SVKDPSPLYD ENSTTRP00000011544/1-491 EVMHYLGQYI MVKQLYDQQE QHMVYCGGDL LGELLGRQSF SVKDPSPLYD 101 150 ENSBTAP00000008209/1-491 MLRKNLVALA TAATDAAQTL AIAQEHSMDI PSQDHLKQSV EESSNSRKRT BACU001102/1-439 ---------- -CCSDSRSRS GSQYGYSKSR PTED------ ---------- ENSP00000356150/1-490 MLRKNLVTLA TATTDAAQTL ALAQDHSMDI PSQDQLKQSA EESSTSRKRT bmy_02397T0/1-404 MLRKNLVTLA TATTDAAQTL ALAQDHSMDI PSQDQLK--- ---------- ENSTTRP00000011544/1-491 MLRKNLVTLS TATTDAAQTL ALAQDHSMDI PSQDQLKQSV EESSNSRKRT 151 200 ENSBTAP00000008209/1-491 EEGNIPTLPT SQYKCKNSRE DEDLVANLTQ EETSRLDLGF EEWDVAGLPW BACU001102/1-439 ---------- ---------- -EDLVANLTQ DETSRLDLGF EEWDVAGLPW ENSP00000356150/1-490 TEDDIPTLPT SEHKCIHSRE DEDLIENLAQ DETSRLDLGF EEWDVAGLPW bmy_02397T0/1-404 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000011544/1-491 EEGNIPALPT SQRKCRNSRE DEDLVANLTQ DETSRLDLGF EEWDVAGLPW 201 250 ENSBTAP00000008209/1-491 WFLGNLRNNY TPRSNGSTDL QTNQDIGTAI VSDTTDDLWF LNESVSEQFG BACU001102/1-439 WFLGNLRNNY TPRSNGSTDL QTNQDIGTAI VSDTTDDLWF LNESVSEQFG ENSP00000356150/1-490 WFLGNLRSNY TPRSNGSTDL QTNQDVGTAI VSDTTDDLWF LNESVSEQLG bmy_02397T0/1-404 ---------- ---------- ----DIGTAI VSDTTDDLWF LNESVSEQFG ENSTTRP00000011544/1-491 WFLGNLRNNY TPRSNGSTDL QTNQDIGTAI VSDTTDDLWF LNESVSEQFG 251 300 ENSBTAP00000008209/1-491 VGKKVEAADP EQTSEEVGKL IDKKVTEVGK NDDLEDPKSI SDDTDIEVTS BACU001102/1-439 VGIKVEATDP EQTSEEVGKV RDKKVIEVGK NDDLEDSKSI SDDTDIEVTS ENSP00000356150/1-490 VGIKVEAADT EQTSEEVGKV SDKKVIEVGK NDDLEDSKSL SDDTDVEVTS bmy_02397T0/1-404 VGIKVEATDP EQTSEEVGKV RDKKVIEVGK NDDLEDSKSI SDDTDIEVTS ENSTTRP00000011544/1-491 VGIKVEATDP EQTSEEVGKV RDKKXXXXXX XXXXXXSKSI SDDTDIEVTS 301 350 ENSBTAP00000008209/1-491 EDEWQCTECK KFNSPSKRYC FRCWALRKDW YSDCSKLTHS LSTSDITAIP BACU001102/1-439 EDEWQCTECK KFNSPSKRYC FRCWALRKDW YSDCSKLTHS LSTSDITAIP ENSP00000356150/1-490 EDEWQCTECK KFNSPSKRYC FRCWALRKDW YSDCSKLTHS LSTSDITAIP bmy_02397T0/1-404 EDEWQCTECK KFNSPSKRYC FRCWALRKDW YSDCSKLTHS LSTSDITAIP ENSTTRP00000011544/1-491 EDEWQCTECK KFNSPSKRYC FRCWALRKDW YSDCSKLTHS LSTSDITAIP 351 400 ENSBTAP00000008209/1-491 EKQESEGVDV PDCRRTVSAP VVRPKDTYVK EESSKHFDPC NSVEFLDLAH BACU001102/1-439 EKQENEGIDV PDCRRTISAP VVRPKDICVK EENSKLFGPC NSVEFLDLAH ENSP00000356150/1-490 EK-ENEGNDV PDCRRTISAP VVRPKDAYIK KENSKLFDPC NSVEFLDLAH bmy_02397T0/1-404 EKQENEGIDV PDCRRTISAP VVRPKDIYVK EENSKLFGPC NSVEFLDLAH ENSTTRP00000011544/1-491 EKQESEGIDV PDCRRTISAP VVRPKDIYVK EENSKLFGPC NSVEFLDLAH 401 450 ENSBTAP00000008209/1-491 SSESQETISS MGEQSDNLFE QRKDTENMED CQNLLKPCSL CEKRPRNGNI BACU001102/1-439 SSESQETISS MGEQSDNLFE QRTDTETMED CQNLLKPCSL CEKRPRDGNI ENSP00000356150/1-490 SSESQETISS MGEQLDNLSE QRTDTENMED CQNLLKPCSL CEKRPRDGNI bmy_02397T0/1-404 SSESQETISS MGEQSDNLFE QRTDTENMED CQNLLKPCSL CEKRPRDGNI ENSTTRP00000011544/1-491 SSESQETISS MGEKSDNLYE QRTGTENMED CQNLLKPCSL CEKRPRDGNI 451 500 ENSBTAP00000008209/1-491 IHGRTGHLVT CFHCARRLKK AGASCPICKK EIQLVIKVFV A BACU001102/1-439 IHGRTGHLVT CFHCARRLKK AGASCPICKK EIQLVIKVFI A ENSP00000356150/1-490 IHGRTGHLVT CFHCARRLKK AGASCPICKK EIQLVIKVFI A bmy_02397T0/1-404 IHGRTGHLVT CFHCARRLKK AGASCPICKK EIQLVIKVFI A ENSTTRP00000011544/1-491 IHGRTGHLVT CFHCARRLKK AGASCPICKK EIQLVIKVFI A